RNA–Protein interactions for RNA: ENST00000559494.1

TSPAN3-207, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-207ENST00000559494 NAALADL1Q9UQQ1 740 aa21.23■□□□□ 0.99
TSPAN3-207ENST00000559494 WNT6Q9Y6F9 365 aa21.23■□□□□ 0.99
TSPAN3-207ENST00000559494 KIF26AQ9ULI4 1882 aaPredicted RBP21.23■□□□□ 0.99
TSPAN3-207ENST00000559494 E2F8A0AVK6 867 aa21.22■□□□□ 0.99
TSPAN3-207ENST00000559494 GREM1O60565 184 aa21.22■□□□□ 0.99
TSPAN3-207ENST00000559494 ARSAP15289 507 aa21.22■□□□□ 0.99
TSPAN3-207ENST00000559494 TNFAIP3P21580 790 aa21.22■□□□□ 0.99
TSPAN3-207ENST00000559494 CASP14P31944 242 aa21.22■□□□□ 0.99
TSPAN3-207ENST00000559494 SLC6A3Q01959 620 aa21.22■□□□□ 0.99
TSPAN3-207ENST00000559494 CLEC16AQ2KHT3 1053 aa21.22■□□□□ 0.99
TSPAN3-207ENST00000559494 MSANTD2Q6P1R3 559 aa21.22■□□□□ 0.99
TSPAN3-207ENST00000559494 OLFML1Q6UWY5 402 aa21.22■□□□□ 0.99
TSPAN3-207ENST00000559494 BEND5Q7L4P6 421 aa21.22■□□□□ 0.99
TSPAN3-207ENST00000559494 ZNF571Q7Z3V5 609 aaPredicted RBP21.22■□□□□ 0.99
TSPAN3-207ENST00000559494 KIAA1958Q8N8K9 716 aa21.22■□□□□ 0.99
TSPAN3-207ENST00000559494 ZNF397Q8NF99 534 aaPredicted RBP21.22■□□□□ 0.99
TSPAN3-207ENST00000559494 OSCP1Q8WVF1 389 aa21.22■□□□□ 0.99
TSPAN3-207ENST00000559494 SYN2Q92777 582 aaPredicted RBP21.22■□□□□ 0.99
TSPAN3-207ENST00000559494 GOLGA1Q92805 767 aa21.22■□□□□ 0.99
TSPAN3-207ENST00000559494 NUCKS1Q9H1E3 243 aaKnown RBP21.22■□□□□ 0.99
TSPAN3-207ENST00000559494 EBF3Q9H4W6 596 aa21.22■□□□□ 0.99
TSPAN3-207ENST00000559494 HEBP1Q9NRV9 189 aa21.22■□□□□ 0.99
TSPAN3-207ENST00000559494 GTSE1Q9NYZ3 720 aa21.22■□□□□ 0.99
TSPAN3-207ENST00000559494 MYOFQ9NZM1 2061 aa21.21■□□□□ 0.99
TSPAN3-207ENST00000559494 TICRRQ7Z2Z1 1910 aa21.21■□□□□ 0.99
TSPAN3-207ENST00000559494 SLC12A8A0AV02 714 aa21.21■□□□□ 0.99
TSPAN3-207ENST00000559494 OTOL1A6NHN0 477 aaPredicted RBP21.21■□□□□ 0.99
TSPAN3-207ENST00000559494 PDGFBP01127 241 aaPredicted RBP21.21■□□□□ 0.99
TSPAN3-207ENST00000559494 NCAM1P13591 858 aa21.21■□□□□ 0.99
TSPAN3-207ENST00000559494 MMP8P22894 467 aa21.21■□□□□ 0.99
TSPAN3-207ENST00000559494 IFNAR2P48551 515 aa21.21■□□□□ 0.99
TSPAN3-207ENST00000559494 YWHAZP63104 245 aaKnown RBP21.21■□□□□ 0.99
TSPAN3-207ENST00000559494 COG7P83436 770 aa21.21■□□□□ 0.99
TSPAN3-207ENST00000559494 KLHL30Q0D2K2 578 aa21.21■□□□□ 0.99
TSPAN3-207ENST00000559494 PDGFRLQ15198 375 aa21.21■□□□□ 0.99
TSPAN3-207ENST00000559494 EML3Q32P44 896 aa21.21■□□□□ 0.99
TSPAN3-207ENST00000559494 EFHC1Q5JVL4 640 aa21.21■□□□□ 0.99
TSPAN3-207ENST00000559494 SYPL2Q5VXT5 272 aa21.21■□□□□ 0.99
TSPAN3-207ENST00000559494 XYLT1Q86Y38 959 aa21.21■□□□□ 0.99
TSPAN3-207ENST00000559494 SIX5Q8N196 739 aa21.21■□□□□ 0.99
TSPAN3-207ENST00000559494 TTC8Q8TAM2 541 aa21.21■□□□□ 0.99
TSPAN3-207ENST00000559494 SEPT11Q9NVA2 429 aaKnown RBP21.21■□□□□ 0.99
TSPAN3-207ENST00000559494 ASNSD1Q9NWL6 643 aa21.21■□□□□ 0.99
TSPAN3-207ENST00000559494 SH3BP1Q9Y3L3 701 aa21.21■□□□□ 0.99
TSPAN3-207ENST00000559494 ZDBF2Q9HCK1 2354 aa21.21■□□□□ 0.99
TSPAN3-207ENST00000559494 FAM86C2PA6NEL3 165 aa21.2■□□□□ 0.98
TSPAN3-207ENST00000559494 SHISA7A6NL88 538 aa21.2■□□□□ 0.98
TSPAN3-207ENST00000559494 STC2O76061 302 aa21.2■□□□□ 0.98
TSPAN3-207ENST00000559494 GLI1P08151 1106 aa21.2■□□□□ 0.98
TSPAN3-207ENST00000559494 HMBSP08397 361 aa21.2■□□□□ 0.98
TSPAN3-207ENST00000559494 CENPCQ03188 943 aa21.2■□□□□ 0.98
TSPAN3-207ENST00000559494 PTP4A2Q12974 167 aa21.2■□□□□ 0.98
TSPAN3-207ENST00000559494 RUNX3Q13761 415 aa21.2■□□□□ 0.98
TSPAN3-207ENST00000559494 HGSNATQ68CP4 663 aa21.2■□□□□ 0.98
TSPAN3-207ENST00000559494 HTR3DQ70Z44 454 aa21.2■□□□□ 0.98
TSPAN3-207ENST00000559494 ZDHHC17Q8IUH5 632 aa21.2■□□□□ 0.98
TSPAN3-207ENST00000559494 ADGRG2Q8IZP9 1017 aa21.2■□□□□ 0.98
TSPAN3-207ENST00000559494 CSGALNACT1Q8TDX6 532 aa21.2■□□□□ 0.98
TSPAN3-207ENST00000559494 POPDC2Q9HBU9 364 aa21.2■□□□□ 0.98
TSPAN3-207ENST00000559494 ARHGEF3Q9NR81 526 aa21.2■□□□□ 0.98
TSPAN3-207ENST00000559494 STRIP2Q9ULQ0 834 aa21.2■□□□□ 0.98
TSPAN3-207ENST00000559494 GRAP2O75791 330 aa21.19■□□□□ 0.98
TSPAN3-207ENST00000559494 KLKB1P03952 638 aa21.19■□□□□ 0.98
TSPAN3-207ENST00000559494 MLF2Q15773 248 aaPredicted RBP21.19■□□□□ 0.98
TSPAN3-207ENST00000559494 ITPRIPL2Q3MIP1 535 aa21.19■□□□□ 0.98
TSPAN3-207ENST00000559494 MMS22LQ6ZRQ5 1243 aa21.19■□□□□ 0.98
TSPAN3-207ENST00000559494 SLC26A9Q7LBE3 791 aa21.19■□□□□ 0.98
TSPAN3-207ENST00000559494 PHF13Q86YI8 300 aaPredicted RBP21.19■□□□□ 0.98
TSPAN3-207ENST00000559494 BBS7Q8IWZ6 715 aa21.19■□□□□ 0.98
TSPAN3-207ENST00000559494 DEFB106AQ8N104 65 aa21.19■□□□□ 0.98
TSPAN3-207ENST00000559494 MSANTD4Q8NCY6 345 aa21.19■□□□□ 0.98
TSPAN3-207ENST00000559494 DQX1Q8TE96 717 aaKnown RBP21.19■□□□□ 0.98
TSPAN3-207ENST00000559494 SLC2A13Q96QE2 648 aa21.19■□□□□ 0.98
TSPAN3-207ENST00000559494 TBC1D14Q9P2M4 693 aa21.19■□□□□ 0.98
TSPAN3-207ENST00000559494 COL4A2P08572 1712 aa21.18■□□□□ 0.98
TSPAN3-207ENST00000559494 DDX3XO00571 662 aaKnown RBP eCLIP21.18■□□□□ 0.981e-9■■■■■ 36.7
TSPAN3-207ENST00000559494 SLC9A3R1O14745 358 aaPredicted RBP21.18■□□□□ 0.98
TSPAN3-207ENST00000559494 CAPN9O14815 690 aa21.18■□□□□ 0.98
TSPAN3-207ENST00000559494 MSI1O43347 362 aaKnown RBP21.18■□□□□ 0.98
TSPAN3-207ENST00000559494 GPR37L1O60883 481 aa21.18■□□□□ 0.98
TSPAN3-207ENST00000559494 HSF2BPO75031 334 aa21.18■□□□□ 0.98
TSPAN3-207ENST00000559494 SOX9P48436 509 aa21.18■□□□□ 0.98
TSPAN3-207ENST00000559494 ZNF75DP51815 510 aa21.18■□□□□ 0.98
TSPAN3-207ENST00000559494 STARD6P59095 220 aa21.18■□□□□ 0.98
TSPAN3-207ENST00000559494 GOLGA8FQ08AF8 430 aa21.18■□□□□ 0.98
TSPAN3-207ENST00000559494 GOLGA8DPQ0D2H9 430 aa21.18■□□□□ 0.98
TSPAN3-207ENST00000559494 TBX2Q13207 712 aaPredicted RBP21.18■□□□□ 0.98
TSPAN3-207ENST00000559494 TRIM14Q14142 442 aa21.18■□□□□ 0.98
TSPAN3-207ENST00000559494 TRIP4Q15650 581 aaPredicted RBP21.18■□□□□ 0.98
TSPAN3-207ENST00000559494 ACAD10Q6JQN1 1059 aa21.18■□□□□ 0.98
TSPAN3-207ENST00000559494 TOGARAM2Q6ZUX3 1019 aa21.18■□□□□ 0.98
TSPAN3-207ENST00000559494 BMP8AQ7Z5Y6 402 aa21.18■□□□□ 0.98
TSPAN3-207ENST00000559494 PHLDB2Q86SQ0 1253 aa21.18■□□□□ 0.98
TSPAN3-207ENST00000559494 C11orf70Q9BRQ4 267 aa21.18■□□□□ 0.98
TSPAN3-207ENST00000559494 TRIM62Q9BVG3 475 aa21.18■□□□□ 0.98
TSPAN3-207ENST00000559494 ECT2Q9H8V3 914 aa21.18■□□□□ 0.98
TSPAN3-207ENST00000559494 TAS2R14Q9NYV8 317 aa21.18■□□□□ 0.98
TSPAN3-207ENST00000559494 HBS1LQ9Y450 684 aaKnown RBP21.18■□□□□ 0.98
TSPAN3-207ENST00000559494 COL4A3Q01955 1670 aa21.18■□□□□ 0.98
TSPAN3-207ENST00000559494 HNRNPH3P31942 346 aaKnown RBP21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms