RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 E2F8A0AVK6 867 aa13.26□□□□□ -0.29
RABGGTA-207ENST00000558936 LGALS16A8MUM7 142 aa13.26□□□□□ -0.29
RABGGTA-207ENST00000558936 E5RJQ4 531 aa13.26□□□□□ -0.29
RABGGTA-207ENST00000558936 F8VZ95 297 aa13.26□□□□□ -0.29
RABGGTA-207ENST00000558936 MSI1O43347 362 aaKnown RBP13.26□□□□□ -0.29
RABGGTA-207ENST00000558936 HNRNPLP14866 589 aaKnown RBP eCLIP13.26□□□□□ -0.29
RABGGTA-207ENST00000558936 TRIM21P19474 475 aaKnown RBP13.26□□□□□ -0.29
RABGGTA-207ENST00000558936 RPS9P46781 194 aaKnown RBP13.26□□□□□ -0.29
RABGGTA-207ENST00000558936 KPNA1P52294 538 aaPredicted RBP13.26□□□□□ -0.29
RABGGTA-207ENST00000558936 MFAP3P55082 362 aa13.26□□□□□ -0.29
RABGGTA-207ENST00000558936 SATB1Q01826 763 aa13.26□□□□□ -0.29
RABGGTA-207ENST00000558936 PDGFRLQ15198 375 aa13.26□□□□□ -0.29
RABGGTA-207ENST00000558936 SYCP1Q15431 976 aa13.26□□□□□ -0.29
RABGGTA-207ENST00000558936 PTPN20Q4JDL3 420 aa13.26□□□□□ -0.29
RABGGTA-207ENST00000558936 LY6G5CQ5SRR4 150 aa13.26□□□□□ -0.29
RABGGTA-207ENST00000558936 OTUD1Q5VV17 481 aaPredicted RBP13.26□□□□□ -0.29
RABGGTA-207ENST00000558936 E4F1Q66K89 784 aaPredicted RBP13.26□□□□□ -0.29
RABGGTA-207ENST00000558936 TRNP1Q6NT89 227 aa13.26□□□□□ -0.29
RABGGTA-207ENST00000558936 ENOSF1Q7L5Y1 443 aa13.26□□□□□ -0.29
RABGGTA-207ENST00000558936 FAM114A1Q8IWE2 563 aa13.26□□□□□ -0.29
RABGGTA-207ENST00000558936 SLC20A1Q8WUM9 679 aa13.26□□□□□ -0.29
RABGGTA-207ENST00000558936 HSFY1Q96LI6 401 aa13.26□□□□□ -0.29
RABGGTA-207ENST00000558936 PCDHB18PQ96TA0 734 aa13.26□□□□□ -0.29
RABGGTA-207ENST00000558936 C8orf33Q9H7E9 229 aaPredicted RBP13.26□□□□□ -0.29
RABGGTA-207ENST00000558936 NOCTQ9UK39 431 aaKnown RBP13.26□□□□□ -0.29
RABGGTA-207ENST00000558936 NAALADL1Q9UQQ1 740 aa13.26□□□□□ -0.29
RABGGTA-207ENST00000558936 MRPS17Q9Y2R5 130 aaKnown RBP13.26□□□□□ -0.29
RABGGTA-207ENST00000558936 I6L893 689 aaPredicted RBP13.25□□□□□ -0.29
RABGGTA-207ENST00000558936 K7ESF4 209 aa13.25□□□□□ -0.29
RABGGTA-207ENST00000558936 THAP12O43422 761 aa13.25□□□□□ -0.29
RABGGTA-207ENST00000558936 IGLV3-27P01718 113 aa13.25□□□□□ -0.29
RABGGTA-207ENST00000558936 ERBB2P04626 1255 aa13.25□□□□□ -0.29
RABGGTA-207ENST00000558936 CYP11B1P15538 503 aa13.25□□□□□ -0.29
RABGGTA-207ENST00000558936 ATP5C1P36542 298 aaKnown RBP13.25□□□□□ -0.29
RABGGTA-207ENST00000558936 PDE6CP51160 858 aa13.25□□□□□ -0.29
RABGGTA-207ENST00000558936 SGSHP51688 502 aa13.25□□□□□ -0.29
RABGGTA-207ENST00000558936 EFEMP1Q12805 493 aa13.25□□□□□ -0.29
RABGGTA-207ENST00000558936 PDCLQ13371 301 aa13.25□□□□□ -0.29
RABGGTA-207ENST00000558936 ZSCAN23Q3MJ62 389 aa13.25□□□□□ -0.29
RABGGTA-207ENST00000558936 C2CD6Q53TS8 623 aa13.25□□□□□ -0.29
RABGGTA-207ENST00000558936 C10orf120Q5SQS8 335 aa13.25□□□□□ -0.29
RABGGTA-207ENST00000558936 EMC10Q5UCC4 262 aa13.25□□□□□ -0.29
RABGGTA-207ENST00000558936 LUZP1Q86V48 1076 aa13.25□□□□□ -0.29
RABGGTA-207ENST00000558936 MIB1Q86YT6 1006 aa13.25□□□□□ -0.29
RABGGTA-207ENST00000558936 C1orf210Q8IVY1 113 aa13.25□□□□□ -0.29
RABGGTA-207ENST00000558936 KIAA1958Q8N8K9 716 aa13.25□□□□□ -0.29
RABGGTA-207ENST00000558936 C1orf131Q8NDD1 294 aaKnown RBP13.25□□□□□ -0.29
RABGGTA-207ENST00000558936 ATOH1Q92858 354 aaPredicted RBP13.25□□□□□ -0.29
RABGGTA-207ENST00000558936 ERGIC2Q96RQ1 377 aa13.25□□□□□ -0.29
RABGGTA-207ENST00000558936 SYT11Q9BT88 431 aa13.25□□□□□ -0.29
RABGGTA-207ENST00000558936 STK33Q9BYT3 514 aa13.25□□□□□ -0.29
RABGGTA-207ENST00000558936 DNAI2Q9GZS0 605 aa13.25□□□□□ -0.29
RABGGTA-207ENST00000558936 MIS12Q9H081 205 aa13.25□□□□□ -0.29
RABGGTA-207ENST00000558936 ZDHHC4Q9NPG8 344 aa13.25□□□□□ -0.29
RABGGTA-207ENST00000558936 RTN4Q9NQC3 1192 aaKnown RBP13.25□□□□□ -0.29
RABGGTA-207ENST00000558936 CNGB3Q9NQW8 809 aa13.25□□□□□ -0.29
RABGGTA-207ENST00000558936 PRMT8Q9NR22 394 aaPredicted RBP13.25□□□□□ -0.29
RABGGTA-207ENST00000558936 FAM207AQ9NSI2 230 aaPredicted RBP13.25□□□□□ -0.29
RABGGTA-207ENST00000558936 A0A0A0MRY4 1105 aa13.24□□□□□ -0.29
RABGGTA-207ENST00000558936 NCAM2O15394 837 aa13.24□□□□□ -0.29
RABGGTA-207ENST00000558936 IGLV3-25P01717 112 aa13.24□□□□□ -0.29
RABGGTA-207ENST00000558936 HMBSP08397 361 aa13.24□□□□□ -0.29
RABGGTA-207ENST00000558936 MMEP08473 750 aa13.24□□□□□ -0.29
RABGGTA-207ENST00000558936 CISD3P0C7P0 127 aa13.24□□□□□ -0.29
RABGGTA-207ENST00000558936 SP9P0CG40 484 aa13.24□□□□□ -0.29
RABGGTA-207ENST00000558936 TFE3P19532 575 aaPredicted RBP13.24□□□□□ -0.29
RABGGTA-207ENST00000558936 CDH5P33151 784 aaPredicted RBP13.24□□□□□ -0.29
RABGGTA-207ENST00000558936 PBX1P40424 430 aa13.24□□□□□ -0.29
RABGGTA-207ENST00000558936 USP8P40818 1118 aa13.24□□□□□ -0.29
RABGGTA-207ENST00000558936 MAGEA9P43362 315 aa13.24□□□□□ -0.29
RABGGTA-207ENST00000558936 IFNAR2P48551 515 aa13.24□□□□□ -0.29
RABGGTA-207ENST00000558936 ZNF165P49910 485 aa13.24□□□□□ -0.29
RABGGTA-207ENST00000558936 POLR2FP61218 127 aaKnown RBP13.24□□□□□ -0.29
RABGGTA-207ENST00000558936 TRIP4Q15650 581 aaPredicted RBP13.24□□□□□ -0.29
RABGGTA-207ENST00000558936 MEA1Q16626 185 aa13.24□□□□□ -0.29
RABGGTA-207ENST00000558936 CC2D1AQ6P1N0 951 aaPredicted RBP13.24□□□□□ -0.29
RABGGTA-207ENST00000558936 MSANTD2Q6P1R3 559 aa13.24□□□□□ -0.29
RABGGTA-207ENST00000558936 MAMSTRQ6ZN01 415 aa13.24□□□□□ -0.29
RABGGTA-207ENST00000558936 FAM217AQ8IXS0 508 aa13.24□□□□□ -0.29
RABGGTA-207ENST00000558936 EPS8L1Q8TE68 723 aa13.24□□□□□ -0.29
RABGGTA-207ENST00000558936 STK32AQ8WU08 396 aa13.24□□□□□ -0.29
RABGGTA-207ENST00000558936 BAP1Q92560 729 aa13.24□□□□□ -0.29
RABGGTA-207ENST00000558936 MSANTD3Q96H12 275 aa13.24□□□□□ -0.29
RABGGTA-207ENST00000558936 IRF2BPLQ9H1B7 796 aa13.24□□□□□ -0.29
RABGGTA-207ENST00000558936 LHX5Q9H2C1 402 aa13.24□□□□□ -0.29
RABGGTA-207ENST00000558936 LRRC4Q9HBW1 653 aa13.24□□□□□ -0.29
RABGGTA-207ENST00000558936 NLRC4Q9NPP4 1024 aa13.24□□□□□ -0.29
RABGGTA-207ENST00000558936 ANLNQ9NQW6 1124 aa13.24□□□□□ -0.29
RABGGTA-207ENST00000558936 HESX1Q9UBX0 185 aa13.24□□□□□ -0.29
RABGGTA-207ENST00000558936 XPO7Q9UIA9 1087 aaKnown RBP13.24□□□□□ -0.29
RABGGTA-207ENST00000558936 RASAL2Q9UJF2 1139 aa13.24□□□□□ -0.29
RABGGTA-207ENST00000558936 DNMT3LQ9UJW3 386 aa13.24□□□□□ -0.29
RABGGTA-207ENST00000558936 AGO1Q9UL18 857 aaKnown RBP13.24□□□□□ -0.29
RABGGTA-207ENST00000558936 DCHS1Q96JQ0 3298 aa13.23□□□□□ -0.29
RABGGTA-207ENST00000558936 MUC22E2RYF6 1773 aaPredicted RBP13.23□□□□□ -0.29
RABGGTA-207ENST00000558936 DNAH14Q0VDD8 3507 aa13.23□□□□□ -0.29
RABGGTA-207ENST00000558936 FMO1Q01740 532 aa13.23□□□□□ -0.29
RABGGTA-207ENST00000558936 PTP4A2Q12974 167 aa13.23□□□□□ -0.29
RABGGTA-207ENST00000558936 RAPGEF1Q13905 1077 aa13.23□□□□□ -0.29
RABGGTA-207ENST00000558936 NR1I3Q14994 352 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms