RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 WRAP73Q9P2S5 460 aaPredicted RBP11.6□□□□□ -0.55
PCAT29-201ENST00000558411 DNAJC16Q9Y2G8 782 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 TTLL3Q9Y4R7 772 aa11.6□□□□□ -0.55
PCAT29-201ENST00000558411 H3BNH8 94 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 CYB561D2O14569 222 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 CHMP2AO43633 222 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 GAS7O60861 476 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 TRPA1O75762 1119 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 OCM2P0CE71 109 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 OCMP0CE72 109 aaPredicted RBP11.59□□□□□ -0.55
PCAT29-201ENST00000558411 COX4I1P13073 169 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 IDH3AP50213 366 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 CCR3P51677 355 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 CDKL1Q00532 357 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 OTUD4Q01804 1114 aaKnown RBP11.59□□□□□ -0.55
PCAT29-201ENST00000558411 KCNC4Q03721 635 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 DPYSQ14117 519 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 C2CD6Q53TS8 623 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 TEDDM1Q5T9Z0 273 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 MBLAC2Q68D91 279 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 NIPAL1Q6NVV3 410 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 DCDC5Q6ZRR9 648 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 POLNQ7Z5Q5 900 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 CBWD2Q8IUF1 395 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 PPP1R14CQ8TAE6 165 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 ACTL9Q8TC94 416 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 KBTBD7Q8WVZ9 684 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 WDR18Q9BV38 432 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 GCOM2Q9BZD3 368 aaPredicted RBP11.59□□□□□ -0.55
PCAT29-201ENST00000558411 IFT122Q9HBG6 1241 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 SERPINB13Q9UIV8 391 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 MYRFQ9Y2G1 1151 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 MYOCOSA0A1B0GUC4 107 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 PRSS51A0A1B0GVH4 220 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 GABRB2P47870 512 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 TAP1Q03518 808 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 PIGHQ14442 188 aaPredicted RBP11.59□□□□□ -0.55
PCAT29-201ENST00000558411 RC3H1Q5TC82 1133 aaKnown RBP11.59□□□□□ -0.55
PCAT29-201ENST00000558411 OLFML1Q6UWY5 402 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 C16orf89Q6UX73 402 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 TPTE2Q6XPS3 522 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 TIFABQ6ZNK6 161 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 BBS12Q6ZW61 710 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 SV2AQ7L0J3 742 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 HAUS6Q7Z4H7 955 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 GPR180Q86V85 440 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 PPM1NQ8N819 430 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 NIPA2Q8N8Q9 360 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 DDHD1Q8NEL9 900 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 PPP4R1Q8TF05 950 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 RPGRQ92834 1020 aaKnown RBP11.59□□□□□ -0.55
PCAT29-201ENST00000558411 CCDC127Q96BQ5 260 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 LXNQ9BS40 222 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 SLC13A1Q9BZW2 595 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 TSPYL2Q9H2G4 693 aaPredicted RBP11.59□□□□□ -0.55
PCAT29-201ENST00000558411 SLC38A7Q9NVC3 462 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 BTG4Q9NY30 223 aa11.59□□□□□ -0.55
PCAT29-201ENST00000558411 GOLGA8IPA6NC78 632 aa11.58□□□□□ -0.56
PCAT29-201ENST00000558411 TRIM64CA6NLI5 447 aa11.58□□□□□ -0.56
PCAT29-201ENST00000558411 GOLGA8JA6NMD2 632 aa11.58□□□□□ -0.56
PCAT29-201ENST00000558411 ADAM23O75077 832 aa11.58□□□□□ -0.56
PCAT29-201ENST00000558411 ESRRBO95718 433 aa11.58□□□□□ -0.56
PCAT29-201ENST00000558411 CALCAP01258 141 aa11.58□□□□□ -0.56
PCAT29-201ENST00000558411 CCDC130P13994 396 aa11.58□□□□□ -0.56
PCAT29-201ENST00000558411 TCF4P15884 667 aa11.58□□□□□ -0.56
PCAT29-201ENST00000558411 GRK2P25098 689 aa11.58□□□□□ -0.56
PCAT29-201ENST00000558411 SHMT1P34896 483 aa11.58□□□□□ -0.56
PCAT29-201ENST00000558411 SLC1A6P48664 564 aa11.58□□□□□ -0.56
PCAT29-201ENST00000558411 TMED10P49755 219 aaKnown RBP11.58□□□□□ -0.56
PCAT29-201ENST00000558411 SERPINB9P50453 376 aa11.58□□□□□ -0.56
PCAT29-201ENST00000558411 DPYSL3Q14195 570 aa11.58□□□□□ -0.56
PCAT29-201ENST00000558411 PSMD6Q15008 389 aa11.58□□□□□ -0.56
PCAT29-201ENST00000558411 MAP7D1Q3KQU3 841 aa11.58□□□□□ -0.56
PCAT29-201ENST00000558411 FASTKD1Q53R41 847 aaKnown RBP11.58□□□□□ -0.56
PCAT29-201ENST00000558411 DCLRE1AQ6PJP8 1040 aa11.58□□□□□ -0.56
PCAT29-201ENST00000558411 ISLR2Q6UXK2 745 aa11.58□□□□□ -0.56
PCAT29-201ENST00000558411 CARM1Q86X55 608 aa11.58□□□□□ -0.56
PCAT29-201ENST00000558411 CTAGE3PQ8IX95 158 aa11.58□□□□□ -0.56
PCAT29-201ENST00000558411 CHPT1Q8WUD6 406 aa11.58□□□□□ -0.56
PCAT29-201ENST00000558411 KCNN1Q92952 543 aa11.58□□□□□ -0.56
PCAT29-201ENST00000558411 FBXL18Q96ME1 805 aa11.58□□□□□ -0.56
PCAT29-201ENST00000558411 PPP1R10Q96QC0 940 aaKnown RBP11.58□□□□□ -0.56
PCAT29-201ENST00000558411 NEURL2Q9BR09 285 aa11.58□□□□□ -0.56
PCAT29-201ENST00000558411 OSBPL11Q9BXB4 747 aa11.58□□□□□ -0.56
PCAT29-201ENST00000558411 ZNF341Q9BYN7 854 aa11.58□□□□□ -0.56
PCAT29-201ENST00000558411 CCDC68Q9H2F9 335 aa11.58□□□□□ -0.56
PCAT29-201ENST00000558411 HIPK3Q9H422 1215 aa11.58□□□□□ -0.56
PCAT29-201ENST00000558411 LIN28AQ9H9Z2 209 aaKnown RBP11.58□□□□□ -0.56
PCAT29-201ENST00000558411 PNPLA3Q9NST1 481 aa11.58□□□□□ -0.56
PCAT29-201ENST00000558411 SCHIP1Q9P0W5 487 aaPredicted RBP11.58□□□□□ -0.56
PCAT29-201ENST00000558411 RNF11Q9Y3C5 154 aa11.58□□□□□ -0.56
PCAT29-201ENST00000558411 COL14A1Q05707 1796 aaKnown RBP11.58□□□□□ -0.56
PCAT29-201ENST00000558411 COL5A3P25940 1745 aaPredicted RBP11.57□□□□□ -0.56
PCAT29-201ENST00000558411 LOC102724428A0A0B4J2F2 783 aa11.57□□□□□ -0.56
PCAT29-201ENST00000558411 C3orf70A6NLC5 250 aaPredicted RBP11.57□□□□□ -0.56
PCAT29-201ENST00000558411 CHADO15335 359 aa11.57□□□□□ -0.56
PCAT29-201ENST00000558411 TOM1L1O75674 476 aa11.57□□□□□ -0.56
PCAT29-201ENST00000558411 SIK1P57059 783 aa11.57□□□□□ -0.56
PCAT29-201ENST00000558411 ESRRGP62508 458 aa11.57□□□□□ -0.56
PCAT29-201ENST00000558411 BASP1P80723 227 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms