RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 PRCPP42785 496 aa11.32□□□□□ -0.6
HNRNPC-230ENST00000557201 FOXC1Q12948 553 aa11.32□□□□□ -0.6
HNRNPC-230ENST00000557201 SEMA3BQ13214 749 aa11.32□□□□□ -0.6
HNRNPC-230ENST00000557201 BYSLQ13895 437 aaKnown RBP11.32□□□□□ -0.6
HNRNPC-230ENST00000557201 ZACNQ401N2 412 aa11.32□□□□□ -0.6
HNRNPC-230ENST00000557201 ZNF667Q5HYK9 610 aa11.32□□□□□ -0.6
HNRNPC-230ENST00000557201 FOXR2Q6PJQ5 311 aa11.32□□□□□ -0.6
HNRNPC-230ENST00000557201 ARMCX6Q7L4S7 300 aa11.32□□□□□ -0.6
HNRNPC-230ENST00000557201 SMYD4Q8IYR2 804 aaPredicted RBP11.32□□□□□ -0.6
HNRNPC-230ENST00000557201 ZNF513Q8N8E2 541 aaPredicted RBP11.32□□□□□ -0.6
HNRNPC-230ENST00000557201 MLKLQ8NB16 471 aa11.32□□□□□ -0.6
HNRNPC-230ENST00000557201 DEFB124Q8NES8 71 aa11.32□□□□□ -0.6
HNRNPC-230ENST00000557201 DHTKD1Q96HY7 919 aaPredicted RBP11.32□□□□□ -0.6
HNRNPC-230ENST00000557201 NUSAP1Q9BXS6 441 aaKnown RBP11.32□□□□□ -0.6
HNRNPC-230ENST00000557201 ADAM33Q9BZ11 813 aa11.32□□□□□ -0.6
HNRNPC-230ENST00000557201 CYLDQ9NQC7 956 aa11.32□□□□□ -0.6
HNRNPC-230ENST00000557201 KRT82Q9NSB4 513 aa11.32□□□□□ -0.6
HNRNPC-230ENST00000557201 OSER1Q9NX31 292 aa11.32□□□□□ -0.6
HNRNPC-230ENST00000557201 MARK1Q9P0L2 795 aa11.32□□□□□ -0.6
HNRNPC-230ENST00000557201 TMEM63CQ9P1W3 806 aa11.32□□□□□ -0.6
HNRNPC-230ENST00000557201 DEC1Q9P2X7 70 aa11.32□□□□□ -0.6
HNRNPC-230ENST00000557201 HMGXB4Q9UGU5 601 aa11.32□□□□□ -0.6
HNRNPC-230ENST00000557201 TRAF3IP3Q9Y228 551 aa11.32□□□□□ -0.6
HNRNPC-230ENST00000557201 SH3BP1Q9Y3L3 701 aa11.32□□□□□ -0.6
HNRNPC-230ENST00000557201 ASCC3Q8N3C0 2202 aaKnown RBP11.32□□□□□ -0.6
HNRNPC-230ENST00000557201 PCDH15Q96QU1 1955 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 CEP295Q9C0D2 2601 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 PPP1R3GB7ZBB8 358 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 HHLA1C9JL84 531 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 BIN1O00499 593 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 PSMA7O14818 248 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 CACNG3O60359 315 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 TLR5O60602 858 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 PHACTR2O75167 634 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 LETM1O95202 739 aaPredicted RBP11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 TBX18O95935 607 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 ASS1P00966 412 aaKnown RBP11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 CCDC130P13994 396 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 NTSR1P30989 418 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 DPP6P42658 865 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 CLCN6P51797 869 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 DLG4P78352 724 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 BIRC3Q13489 604 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 STIM1Q13586 685 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 NFIL3Q16649 462 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 UAP1L1Q3KQV9 507 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 PREPLQ4J6C6 727 aaPredicted RBP11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 ZCWPW2Q504Y3 356 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 C1orf220Q5T0J3 134 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 C10orf76Q5T2E6 689 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 LYSMD4Q5XG99 296 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 BTBD8Q5XKL5 378 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 EGFLAMQ63HQ2 1017 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 CAVIN1Q6NZI2 390 aaKnown RBP11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 SCARA5Q6ZMJ2 495 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 GPRIN1Q7Z2K8 1008 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 TRMT11Q7Z4G4 463 aaKnown RBP11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 UNC93AQ86WB7 457 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 C12orf29Q8N999 325 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 SLC2A14Q8TDB8 520 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 P2RY11Q96G91 374 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 MS4A3Q96HJ5 214 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 ACOX2Q99424 681 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 GABRG3Q99928 467 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 MED10Q9BTT4 135 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 SCNM1Q9BWG6 230 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 CAPN10Q9HC96 672 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 CALCOCO1Q9P1Z2 691 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 BCCIPQ9P287 314 aaKnown RBP eCLIP11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 RALYQ9UKM9 306 aaKnown RBP11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 ZMIZ1Q9ULJ6 1067 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 MAPK8IP1Q9UQF2 711 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 ZZEF1O43149 2961 aa11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 MYO18AQ92614 2054 aaKnown RBP11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 ATXN2Q99700 1313 aaKnown RBP11.31□□□□□ -0.6
HNRNPC-230ENST00000557201 IGHV1OR15-9A0A0B4J2B8 117 aa11.3□□□□□ -0.6
HNRNPC-230ENST00000557201 PRRT4C9JH25 899 aa11.3□□□□□ -0.6
HNRNPC-230ENST00000557201 CISD3P0C7P0 127 aa11.3□□□□□ -0.6
HNRNPC-230ENST00000557201 ASPAP45381 313 aa11.3□□□□□ -0.6
HNRNPC-230ENST00000557201 MAPK8P45983 427 aa11.3□□□□□ -0.6
HNRNPC-230ENST00000557201 NDST1P52848 882 aa11.3□□□□□ -0.6
HNRNPC-230ENST00000557201 ORC1Q13415 861 aa11.3□□□□□ -0.6
HNRNPC-230ENST00000557201 SGSM1Q2NKQ1 1148 aa11.3□□□□□ -0.6
HNRNPC-230ENST00000557201 ANO4Q32M45 955 aa11.3□□□□□ -0.6
HNRNPC-230ENST00000557201 EDRF1Q3B7T1 1238 aa11.3□□□□□ -0.6
HNRNPC-230ENST00000557201 CT47A1Q5JQC4 288 aaPredicted RBP11.3□□□□□ -0.6
HNRNPC-230ENST00000557201 ISM2Q6H9L7 571 aa11.3□□□□□ -0.6
HNRNPC-230ENST00000557201 KIAA1211LQ6NV74 962 aa11.3□□□□□ -0.6
HNRNPC-230ENST00000557201 SLC36A4Q6YBV0 504 aa11.3□□□□□ -0.6
HNRNPC-230ENST00000557201 SV2AQ7L0J3 742 aa11.3□□□□□ -0.6
HNRNPC-230ENST00000557201 SLC41A1Q8IVJ1 513 aa11.3□□□□□ -0.6
HNRNPC-230ENST00000557201 TMC2Q8TDI7 906 aa11.3□□□□□ -0.6
HNRNPC-230ENST00000557201 TAF4BQ92750 862 aa11.3□□□□□ -0.6
HNRNPC-230ENST00000557201 TWNKQ96RR1 684 aa11.3□□□□□ -0.6
HNRNPC-230ENST00000557201 HNRNPABQ99729 332 aaKnown RBP11.3□□□□□ -0.6
HNRNPC-230ENST00000557201 FBXO44Q9H4M3 255 aa11.3□□□□□ -0.6
HNRNPC-230ENST00000557201 FSCN3Q9NQT6 498 aa11.3□□□□□ -0.6
HNRNPC-230ENST00000557201 TLR8Q9NR97 1041 aaKnown RBP11.3□□□□□ -0.6
HNRNPC-230ENST00000557201 FBXO10Q9UK96 956 aa11.3□□□□□ -0.6
HNRNPC-230ENST00000557201 SLC6A14Q9UN76 642 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms