RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 NUDT17P0C025 328 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 RARGP13631 454 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 TCF4P15884 667 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 PDGFRAP16234 1089 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 LMO2P25791 158 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 IL1R2P27930 398 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 MIPP30301 263 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 THPOP40225 353 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 PTPN9P43378 593 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 KCNJ1P48048 391 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 LHX1P48742 406 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 ARSEP51690 589 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 PDE4CQ08493 712 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 CALCOCO2Q13137 446 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 LPIN1Q14693 890 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 PPP1R7Q15435 360 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 UAP1Q16222 522 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-235ENST00000556082 ELOA3BQ3SY89 546 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 ATP13A4Q4VNC1 1196 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 ODF2Q5BJF6 829 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 FAM102AQ5T9C2 384 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-235ENST00000556082 DAB2IPQ5VWQ8 1189 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 OR6B2Q6IFH4 312 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 RHBDF2Q6PJF5 856 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 CEP128Q6ZU80 1094 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 FAM183BPQ6ZVS7 135 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 SLC26A9Q7LBE3 791 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 CROCCP2Q86T23 111 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 RELL1Q8IUW5 271 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 ADGRF2Q8IZF7 708 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 ELOA3Q8NG57 546 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 SLC35B2Q8TB61 432 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 ZDHHC1Q8WTX9 485 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 TEKT4Q8WW24 435 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 RXFP2Q8WXD0 754 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 KCTD13Q8WZ19 329 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 CENPIQ92674 756 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-235ENST00000556082 PGBD4Q96DM1 585 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 SNF8Q96H20 258 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 RUFY1Q96T51 708 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 C11orf84Q9BUA3 381 aaPredicted RBP8.68□□□□□ -1.02
ATXN3-235ENST00000556082 TMEM109Q9BVC6 243 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 HEMGNQ9BXL5 484 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 DUSP16Q9BY84 665 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 PABPC3Q9H361 631 aaKnown RBP8.68□□□□□ -1.02
ATXN3-235ENST00000556082 HCN2Q9UL51 889 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 PADI3Q9ULW8 664 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 USP18Q9UMW8 372 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 R3HDM2Q9Y2K5 976 aaKnown RBP8.68□□□□□ -1.02
ATXN3-235ENST00000556082 FAN1Q9Y2M0 1017 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 CASP8AP2Q9UKL3 1982 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 CITO14578 2027 aa8.68□□□□□ -1.02
ATXN3-235ENST00000556082 LRRD1A4D1F6 860 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 ARL5CA6NH57 179 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 XPO1O14980 1071 aaKnown RBP8.67□□□□□ -1.02
ATXN3-235ENST00000556082 TP73O15350 636 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 PAPSS1O43252 624 aaPredicted RBP8.67□□□□□ -1.02
ATXN3-235ENST00000556082 ATP9BO43861 1147 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 SIN3BO75182 1162 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 PDGFRBP09619 1106 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 ELNP15502 786 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 DESP17661 470 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 PTPN1P18031 435 aaKnown RBP8.67□□□□□ -1.02
ATXN3-235ENST00000556082 KLRC2P26717 231 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 FLT3P36888 993 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 PLTPP55058 493 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 SLC8A3P57103 927 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 PSMA6P60900 246 aaKnown RBP8.67□□□□□ -1.02
ATXN3-235ENST00000556082 FAM189BP81408 668 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 PLCB3Q01970 1234 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 KRT17Q04695 432 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 BYSLQ13895 437 aaKnown RBP8.67□□□□□ -1.02
ATXN3-235ENST00000556082 PDK2Q15119 407 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 OASLQ15646 514 aaKnown RBP8.67□□□□□ -1.02
ATXN3-235ENST00000556082 CCDC14Q49A88 953 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 GLIPR1L2Q4G1C9 344 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 TXNRD3NBQ6F5E7 133 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 AGMOQ6ZNB7 445 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 TRMT10CQ7L0Y3 403 aaKnown RBP8.67□□□□□ -1.02
ATXN3-235ENST00000556082 EMC1Q8N766 993 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 KCTD6Q8NC69 237 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 B3GALNT2Q8NCR0 500 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 FBXO25Q8TCJ0 367 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 POM121Q96HA1 1249 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 SENP8Q96LD8 212 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 GLT1D1Q96MS3 346 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 UROC1Q96N76 676 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 GAD1Q99259 594 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 TRIM31Q9BZY9 425 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 DPEP3Q9H4B8 488 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 SUV39H2Q9H5I1 410 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 RSAD1Q9HA92 442 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 PRDM16Q9HAZ2 1276 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 VPS18Q9P253 973 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 ZNF232Q9UNY5 417 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 PLAAQ9Y263 795 aa8.67□□□□□ -1.02
ATXN3-235ENST00000556082 GOLGA6CA6NDK9 693 aa8.66□□□□□ -1.02
ATXN3-235ENST00000556082 HMGB1P1B2RPK0 211 aaPredicted RBP8.66□□□□□ -1.02
ATXN3-235ENST00000556082 PI4K2BG5E9Z4 385 aa8.66□□□□□ -1.02
ATXN3-235ENST00000556082 PRPSAP2O60256 369 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms