RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 PAGE5Q96GU1 130 aa13.26□□□□□ -0.29
COPS7A-221ENST00000546229 HNRNPABQ99729 332 aaKnown RBP13.26□□□□□ -0.29
COPS7A-221ENST00000546229 MED10Q9BTT4 135 aa13.26□□□□□ -0.29
COPS7A-221ENST00000546229 SLC6A17Q9H1V8 727 aa13.26□□□□□ -0.29
COPS7A-221ENST00000546229 DNAJC17Q9NVM6 304 aaKnown RBP13.26□□□□□ -0.29
COPS7A-221ENST00000546229 BAHCC1Q9P281 2608 aa13.26□□□□□ -0.29
COPS7A-221ENST00000546229 CACNA1GO43497 2377 aa13.25□□□□□ -0.29
COPS7A-221ENST00000546229 MAPK13O15264 365 aa13.25□□□□□ -0.29
COPS7A-221ENST00000546229 PHACTR2O75167 634 aa13.25□□□□□ -0.29
COPS7A-221ENST00000546229 PENKP01210 267 aaPredicted RBP13.25□□□□□ -0.29
COPS7A-221ENST00000546229 KLKB1P03952 638 aa13.25□□□□□ -0.29
COPS7A-221ENST00000546229 RPN1P04843 607 aaKnown RBP13.25□□□□□ -0.29
COPS7A-221ENST00000546229 C7P10643 843 aa13.25□□□□□ -0.29
COPS7A-221ENST00000546229 CD59P13987 128 aa13.25□□□□□ -0.29
COPS7A-221ENST00000546229 WASP42768 502 aa13.25□□□□□ -0.29
COPS7A-221ENST00000546229 MAPK8P45983 427 aa13.25□□□□□ -0.29
COPS7A-221ENST00000546229 KIF11P52732 1056 aa13.25□□□□□ -0.29
COPS7A-221ENST00000546229 PPP3CAQ08209 521 aa13.25□□□□□ -0.29
COPS7A-221ENST00000546229 NFIL3Q16649 462 aa13.25□□□□□ -0.29
COPS7A-221ENST00000546229 SGSM1Q2NKQ1 1148 aa13.25□□□□□ -0.29
COPS7A-221ENST00000546229 ANO4Q32M45 955 aa13.25□□□□□ -0.29
COPS7A-221ENST00000546229 ZCWPW2Q504Y3 356 aa13.25□□□□□ -0.29
COPS7A-221ENST00000546229 FOXD4L5Q5VV16 416 aaPredicted RBP13.25□□□□□ -0.29
COPS7A-221ENST00000546229 GRAMD4Q6IC98 578 aa13.25□□□□□ -0.29
COPS7A-221ENST00000546229 ZNF276Q8N554 614 aa13.25□□□□□ -0.29
COPS7A-221ENST00000546229 OR2I1PQ8NGU4 316 aa13.25□□□□□ -0.29
COPS7A-221ENST00000546229 TAS1R2Q8TE23 839 aa13.25□□□□□ -0.29
COPS7A-221ENST00000546229 IPO4Q8TEX9 1081 aaKnown RBP13.25□□□□□ -0.29
COPS7A-221ENST00000546229 FOXD4L4Q8WXT5 416 aaPredicted RBP13.25□□□□□ -0.29
COPS7A-221ENST00000546229 MRGPRX1Q96LB2 322 aa13.25□□□□□ -0.29
COPS7A-221ENST00000546229 NUSAP1Q9BXS6 441 aaKnown RBP13.25□□□□□ -0.29
COPS7A-221ENST00000546229 FBXO44Q9H4M3 255 aa13.25□□□□□ -0.29
COPS7A-221ENST00000546229 TLR8Q9NR97 1041 aaKnown RBP13.25□□□□□ -0.29
COPS7A-221ENST00000546229 DNAAF2Q9NVR5 837 aaKnown RBP13.25□□□□□ -0.29
COPS7A-221ENST00000546229 BCCIPQ9P287 314 aaKnown RBP eCLIP13.25□□□□□ -0.29
COPS7A-221ENST00000546229 RCOR1Q9UKL0 485 aa13.25□□□□□ -0.29
COPS7A-221ENST00000546229 TRAF3IP3Q9Y228 551 aa13.25□□□□□ -0.29
COPS7A-221ENST00000546229 USP3Q9Y6I4 520 aa13.25□□□□□ -0.29
COPS7A-221ENST00000546229 ATRXP46100 2492 aa13.24□□□□□ -0.29
COPS7A-221ENST00000546229 FAM237AA0A1B0GTK4 181 aa13.24□□□□□ -0.29
COPS7A-221ENST00000546229 A0A1W2PQH9 124 aa13.24□□□□□ -0.29
COPS7A-221ENST00000546229 FAM221BA6H8Z2 402 aa13.24□□□□□ -0.29
COPS7A-221ENST00000546229 NEDD8-MDP1E9PL57 170 aa13.24□□□□□ -0.29
COPS7A-221ENST00000546229 IKBKBO14920 756 aa13.24□□□□□ -0.29
COPS7A-221ENST00000546229 AP5Z1O43299 807 aa13.24□□□□□ -0.29
COPS7A-221ENST00000546229 HYAL3O43820 417 aaPredicted RBP13.24□□□□□ -0.29
COPS7A-221ENST00000546229 CILPO75339 1184 aa13.24□□□□□ -0.29
COPS7A-221ENST00000546229 STC2O76061 302 aa13.24□□□□□ -0.29
COPS7A-221ENST00000546229 SERPINF2P08697 491 aa13.24□□□□□ -0.29
COPS7A-221ENST00000546229 PRR29P0C7W0 189 aa13.24□□□□□ -0.29
COPS7A-221ENST00000546229 FAM200BP0CF97 657 aa13.24□□□□□ -0.29
COPS7A-221ENST00000546229 DPP6P42658 865 aa13.24□□□□□ -0.29
COPS7A-221ENST00000546229 RPL6Q02878 288 aaKnown RBP13.24□□□□□ -0.29
COPS7A-221ENST00000546229 DNM1Q05193 864 aaKnown RBP13.24□□□□□ -0.29
COPS7A-221ENST00000546229 ZNF33AQ06730 810 aa13.24□□□□□ -0.29
COPS7A-221ENST00000546229 UAP1L1Q3KQV9 507 aa13.24□□□□□ -0.29
COPS7A-221ENST00000546229 FYB2Q5VWT5 728 aa13.24□□□□□ -0.29
COPS7A-221ENST00000546229 BTBD8Q5XKL5 378 aa13.24□□□□□ -0.29
COPS7A-221ENST00000546229 BHLHA9Q7RTU4 235 aa13.24□□□□□ -0.29
COPS7A-221ENST00000546229 CCDC186Q7Z3E2 898 aa13.24□□□□□ -0.29
COPS7A-221ENST00000546229 BBS2Q9BXC9 721 aa13.24□□□□□ -0.29
COPS7A-221ENST00000546229 CACNA2D2Q9NY47 1150 aa13.24□□□□□ -0.29
COPS7A-221ENST00000546229 USP36Q9P275 1121 aaKnown RBP13.24□□□□□ -0.29
COPS7A-221ENST00000546229 KLK13Q9UKR3 277 aa13.24□□□□□ -0.29
COPS7A-221ENST00000546229 SLC6A14Q9UN76 642 aa13.24□□□□□ -0.29
COPS7A-221ENST00000546229 SLC27A6Q9Y2P4 619 aa13.24□□□□□ -0.29
COPS7A-221ENST00000546229 NEUROG3Q9Y4Z2 214 aa13.24□□□□□ -0.29
COPS7A-221ENST00000546229 PCDHA5Q9Y5H7 936 aa13.24□□□□□ -0.29
COPS7A-221ENST00000546229 RAD54BQ9Y620 910 aa13.24□□□□□ -0.29
COPS7A-221ENST00000546229 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.23□□□□□ -0.29
COPS7A-221ENST00000546229 SPAARA0A1B0GVQ0 90 aa13.23□□□□□ -0.29
COPS7A-221ENST00000546229 TMEM8BA6NDV4 472 aa13.23□□□□□ -0.29
COPS7A-221ENST00000546229 GFRA2O00451 464 aa13.23□□□□□ -0.29
COPS7A-221ENST00000546229 CENPBP07199 599 aaPredicted RBP13.23□□□□□ -0.29
COPS7A-221ENST00000546229 TRIM49P0CI25 452 aa13.23□□□□□ -0.29
COPS7A-221ENST00000546229 TRIM49CP0CI26 452 aa13.23□□□□□ -0.29
COPS7A-221ENST00000546229 PFKFB1P16118 471 aa13.23□□□□□ -0.29
COPS7A-221ENST00000546229 ACO1P21399 889 aaKnown RBP13.23□□□□□ -0.29
COPS7A-221ENST00000546229 ADORA2BP29275 332 aa13.23□□□□□ -0.29
COPS7A-221ENST00000546229 PIK3CAP42336 1068 aa13.23□□□□□ -0.29
COPS7A-221ENST00000546229 ME1P48163 572 aa13.23□□□□□ -0.29
COPS7A-221ENST00000546229 ENPEPQ07075 957 aa13.23□□□□□ -0.29
COPS7A-221ENST00000546229 BYSLQ13895 437 aaKnown RBP13.23□□□□□ -0.29
COPS7A-221ENST00000546229 DUOXA1Q1HG43 343 aa13.23□□□□□ -0.29
COPS7A-221ENST00000546229 FOXD4L6Q3SYB3 417 aaPredicted RBP13.23□□□□□ -0.29
COPS7A-221ENST00000546229 ATL3Q6DD88 541 aa13.23□□□□□ -0.29
COPS7A-221ENST00000546229 FOXD4L3Q6VB84 417 aaPredicted RBP13.23□□□□□ -0.29
COPS7A-221ENST00000546229 SLC36A4Q6YBV0 504 aa13.23□□□□□ -0.29
COPS7A-221ENST00000546229 FAM217AQ8IXS0 508 aa13.23□□□□□ -0.29
COPS7A-221ENST00000546229 DEFB119Q8N690 84 aa13.23□□□□□ -0.29
COPS7A-221ENST00000546229 ZNF419Q96HQ0 510 aaPredicted RBP13.23□□□□□ -0.29
COPS7A-221ENST00000546229 HSPA12BQ96MM6 686 aa13.23□□□□□ -0.29
COPS7A-221ENST00000546229 EXOC1Q9NV70 894 aa13.23□□□□□ -0.29
COPS7A-221ENST00000546229 FAM13BQ9NYF5 915 aa13.23□□□□□ -0.29
COPS7A-221ENST00000546229 NUDT5Q9UKK9 219 aa13.23□□□□□ -0.29
COPS7A-221ENST00000546229 CYP8B1Q9UNU6 501 aa13.23□□□□□ -0.29
COPS7A-221ENST00000546229 PLXNB3Q9ULL4 1909 aa13.22□□□□□ -0.29
COPS7A-221ENST00000546229 A0A1W2PQD8 194 aa13.22□□□□□ -0.29
COPS7A-221ENST00000546229 SRRM3A6NNA2 597 aaPredicted RBP13.22□□□□□ -0.29
COPS7A-221ENST00000546229 WASH3PC4AMC7 463 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms