RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 MCCD1P59942 119 aaPredicted RBP17.13■□□□□ 0.33
DDX55-212ENST00000544738 PPP3CAQ08209 521 aa17.13■□□□□ 0.33
DDX55-212ENST00000544738 INCA1Q0VD86 236 aa17.13■□□□□ 0.33
DDX55-212ENST00000544738 TRIP6Q15654 476 aaKnown RBP17.13■□□□□ 0.33
DDX55-212ENST00000544738 DUOXA1Q1HG43 343 aa17.13■□□□□ 0.33
DDX55-212ENST00000544738 ZCWPW2Q504Y3 356 aa17.13■□□□□ 0.33
DDX55-212ENST00000544738 HECTD3Q5T447 861 aa17.13■□□□□ 0.33
DDX55-212ENST00000544738 KRT39Q6A163 491 aa17.13■□□□□ 0.33
DDX55-212ENST00000544738 SPOPLQ6IQ16 392 aa17.13■□□□□ 0.33
DDX55-212ENST00000544738 ADGRG2Q8IZP9 1017 aa17.13■□□□□ 0.33
DDX55-212ENST00000544738 FMR1NBQ8N0W7 255 aaPredicted RBP17.13■□□□□ 0.33
DDX55-212ENST00000544738 PGBD3Q8N328 593 aa17.13■□□□□ 0.33
DDX55-212ENST00000544738 SCAMP5Q8TAC9 235 aa17.13■□□□□ 0.33
DDX55-212ENST00000544738 ADAM32Q8TC27 787 aa17.13■□□□□ 0.33
DDX55-212ENST00000544738 SLC2A14Q8TDB8 520 aa17.13■□□□□ 0.33
DDX55-212ENST00000544738 FAXDC2Q96IV6 333 aa17.13■□□□□ 0.33
DDX55-212ENST00000544738 GSDMAQ96QA5 445 aa17.13■□□□□ 0.33
DDX55-212ENST00000544738 FBXO44Q9H4M3 255 aa17.13■□□□□ 0.33
DDX55-212ENST00000544738 TMEM8AQ9HCN3 771 aa17.13■□□□□ 0.33
DDX55-212ENST00000544738 KRT82Q9NSB4 513 aa17.13■□□□□ 0.33
DDX55-212ENST00000544738 TBC1D14Q9P2M4 693 aa17.13■□□□□ 0.33
DDX55-212ENST00000544738 CHORDC1Q9UHD1 332 aaPredicted RBP17.13■□□□□ 0.33
DDX55-212ENST00000544738 PILRBQ9UKJ0 227 aa17.13■□□□□ 0.33
DDX55-212ENST00000544738 HELZP42694 1942 aaKnown RBP17.13■□□□□ 0.33
DDX55-212ENST00000544738 E2F8A0AVK6 867 aa17.12■□□□□ 0.33
DDX55-212ENST00000544738 FAM92AA1XBS5 289 aa17.12■□□□□ 0.33
DDX55-212ENST00000544738 CETN3O15182 167 aa17.12■□□□□ 0.33
DDX55-212ENST00000544738 SMC2O95347 1197 aa17.12■□□□□ 0.33
DDX55-212ENST00000544738 TRIM49P0CI25 452 aa17.12■□□□□ 0.33
DDX55-212ENST00000544738 TRIM49CP0CI26 452 aa17.12■□□□□ 0.33
DDX55-212ENST00000544738 PNOCQ13519 176 aa17.12■□□□□ 0.33
DDX55-212ENST00000544738 HNRNPDQ14103 355 aaKnown RBP17.12■□□□□ 0.33
DDX55-212ENST00000544738 CCNI2Q6ZMN8 369 aaPredicted RBP17.12■□□□□ 0.33
DDX55-212ENST00000544738 FILIP1Q7Z7B0 1213 aa17.12■□□□□ 0.33
DDX55-212ENST00000544738 TTC39CQ8N584 583 aa17.12■□□□□ 0.33
DDX55-212ENST00000544738 MINDY1Q8N5J2 469 aa17.12■□□□□ 0.33
DDX55-212ENST00000544738 CEP76Q8TAP6 659 aa17.12■□□□□ 0.33
DDX55-212ENST00000544738 TAS1R2Q8TE23 839 aa17.12■□□□□ 0.33
DDX55-212ENST00000544738 WHAMMQ8TF30 809 aa17.12■□□□□ 0.33
DDX55-212ENST00000544738 OTUB2Q96DC9 234 aa17.12■□□□□ 0.33
DDX55-212ENST00000544738 HNRNPABQ99729 332 aaKnown RBP17.12■□□□□ 0.33
DDX55-212ENST00000544738 SMOQ99835 787 aa17.12■□□□□ 0.33
DDX55-212ENST00000544738 NT5C1AQ9BXI3 368 aa17.12■□□□□ 0.33
DDX55-212ENST00000544738 NIF3L1Q9GZT8 377 aa17.12■□□□□ 0.33
DDX55-212ENST00000544738 FAM49BQ9NUQ9 324 aa17.12■□□□□ 0.33
DDX55-212ENST00000544738 SMPD4Q9NXE4 827 aa17.12■□□□□ 0.33
DDX55-212ENST00000544738 CFAP97Q9P2B7 532 aa17.12■□□□□ 0.33
DDX55-212ENST00000544738 HOOK1Q9UJC3 728 aaKnown RBP17.12■□□□□ 0.33
DDX55-212ENST00000544738 SH3BP5O60239 455 aa17.11■□□□□ 0.33
DDX55-212ENST00000544738 ZDHHC11BP0C7U3 371 aa17.11■□□□□ 0.33
DDX55-212ENST00000544738 FAM200BP0CF97 657 aa17.11■□□□□ 0.33
DDX55-212ENST00000544738 EPB41P11171 864 aaKnown RBP17.11■□□□□ 0.33
DDX55-212ENST00000544738 CD59P13987 128 aa17.11■□□□□ 0.33
DDX55-212ENST00000544738 CCDC130P13994 396 aa17.11■□□□□ 0.33
DDX55-212ENST00000544738 DPP6P42658 865 aa17.11■□□□□ 0.33
DDX55-212ENST00000544738 COBLL1Q53SF7 1204 aa17.11■□□□□ 0.33
DDX55-212ENST00000544738 ZNF658Q5TYW1 1059 aaPredicted RBP17.11■□□□□ 0.33
DDX55-212ENST00000544738 ALLCQ8N6M5 410 aa17.11■□□□□ 0.33
DDX55-212ENST00000544738 C12orf29Q8N999 325 aa17.11■□□□□ 0.33
DDX55-212ENST00000544738 TXNDC5Q8NBS9 432 aaKnown RBP17.11■□□□□ 0.33
DDX55-212ENST00000544738 HMGB4Q8WW32 186 aa17.11■□□□□ 0.33
DDX55-212ENST00000544738 MMRN2Q9H8L6 949 aa17.11■□□□□ 0.33
DDX55-212ENST00000544738 HMGXB4Q9UGU5 601 aa17.11■□□□□ 0.33
DDX55-212ENST00000544738 KALRNO60229 2985 aa17.1■□□□□ 0.33
DDX55-212ENST00000544738 COCHO43405 550 aa17.1■□□□□ 0.33
DDX55-212ENST00000544738 KLF8O95600 359 aaPredicted RBP17.1■□□□□ 0.33
DDX55-212ENST00000544738 ADH1CP00326 375 aa17.1■□□□□ 0.33
DDX55-212ENST00000544738 CYP17A1P05093 508 aa17.1■□□□□ 0.33
DDX55-212ENST00000544738 SERPINF2P08697 491 aa17.1■□□□□ 0.33
DDX55-212ENST00000544738 FTH1P19P0C7X4 201 aa17.1■□□□□ 0.33
DDX55-212ENST00000544738 TIE1P35590 1138 aa17.1■□□□□ 0.33
DDX55-212ENST00000544738 MAP3K7CLP57077 242 aa17.1■□□□□ 0.33
DDX55-212ENST00000544738 ORC1Q13415 861 aa17.1■□□□□ 0.33
DDX55-212ENST00000544738 BYSLQ13895 437 aaKnown RBP17.1■□□□□ 0.33
DDX55-212ENST00000544738 DHCR24Q15392 516 aa17.1■□□□□ 0.33
DDX55-212ENST00000544738 MAP7D1Q3KQU3 841 aa17.1■□□□□ 0.33
DDX55-212ENST00000544738 SPDYCQ5MJ68 293 aa17.1■□□□□ 0.33
DDX55-212ENST00000544738 SMYD4Q8IYR2 804 aaPredicted RBP17.1■□□□□ 0.33
DDX55-212ENST00000544738 FBXL13Q8NEE6 735 aa17.1■□□□□ 0.33
DDX55-212ENST00000544738 ZMIZ2Q8NF64 920 aa17.1■□□□□ 0.33
DDX55-212ENST00000544738 ADAMTS14Q8WXS8 1223 aa17.1■□□□□ 0.33
DDX55-212ENST00000544738 CYFIP2Q96F07 1278 aa17.1■□□□□ 0.33
DDX55-212ENST00000544738 TSG101Q99816 390 aa17.1■□□□□ 0.33
DDX55-212ENST00000544738 DUSP9Q99956 384 aaKnown RBP17.1■□□□□ 0.33
DDX55-212ENST00000544738 NACA2Q9H009 215 aa17.1■□□□□ 0.33
DDX55-212ENST00000544738 FAM124BQ9H5Z6 455 aaPredicted RBP17.1■□□□□ 0.33
DDX55-212ENST00000544738 APOBEC3GQ9HC16 384 aaKnown RBP17.1■□□□□ 0.33
DDX55-212ENST00000544738 PNPLA8Q9NP80 782 aa17.1■□□□□ 0.33
DDX55-212ENST00000544738 POLMQ9NP87 494 aaPredicted RBP17.1■□□□□ 0.33
DDX55-212ENST00000544738 TLR8Q9NR97 1041 aaKnown RBP17.1■□□□□ 0.33
DDX55-212ENST00000544738 SGK1O00141 431 aa17.09■□□□□ 0.33
DDX55-212ENST00000544738 ARHGAP33O14559 1287 aa17.09■□□□□ 0.33
DDX55-212ENST00000544738 CILPO75339 1184 aa17.09■□□□□ 0.33
DDX55-212ENST00000544738 BEST1O76090 585 aa17.09■□□□□ 0.33
DDX55-212ENST00000544738 ADORA2BP29275 332 aa17.09■□□□□ 0.33
DDX55-212ENST00000544738 OPRD1P41143 372 aa17.09■□□□□ 0.33
DDX55-212ENST00000544738 EIF2DP41214 584 aaKnown RBP17.09■□□□□ 0.33
DDX55-212ENST00000544738 PRCPP42785 496 aa17.09■□□□□ 0.33
DDX55-212ENST00000544738 MRPS21P82921 87 aaKnown RBP17.09■□□□□ 0.33
DDX55-212ENST00000544738 FKBP3Q00688 224 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms