RNA–Protein interactions for RNA: ENST00000534636.5

CTSB-233, Transcript of cathepsin B, human

TSL 4

Gene CTSB, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTSB-233	ENST00000534636	DPP6	P42658	865 aa		19.44	■□□□□ 0.7
CTSB-233	ENST00000534636	PLA2G4A	P47712	749 aa		19.44	■□□□□ 0.7
CTSB-233	ENST00000534636	ZCWPW2	Q504Y3	356 aa		19.44	■□□□□ 0.7
CTSB-233	ENST00000534636	ZNF394	Q53GI3	561 aa		19.44	■□□□□ 0.7
CTSB-233	ENST00000534636	RLN3	Q8WXF3	142 aa		19.44	■□□□□ 0.7
CTSB-233	ENST00000534636	PIGK	Q92643	395 aa		19.44	■□□□□ 0.7
CTSB-233	ENST00000534636	WBP2	Q969T9	261 aa		19.44	■□□□□ 0.7
CTSB-233	ENST00000534636	HEXIM2	Q96MH2	286 aa	Known RBP	19.44	■□□□□ 0.7
CTSB-233	ENST00000534636	TSG101	Q99816	390 aa		19.44	■□□□□ 0.7
CTSB-233	ENST00000534636	LSM14B	Q9BX40	385 aa	Known RBP	19.44	■□□□□ 0.7
CTSB-233	ENST00000534636	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	19.44	■□□□□ 0.7
CTSB-233	ENST00000534636	OSER1	Q9NX31	292 aa		19.44	■□□□□ 0.7
CTSB-233	ENST00000534636	MARK1	Q9P0L2	795 aa		19.44	■□□□□ 0.7
CTSB-233	ENST00000534636	CEP192	Q8TEP8	1941 aa		19.44	■□□□□ 0.7
CTSB-233	ENST00000534636	GOLGA6L4	A6NEF3	574 aa		19.43	■□□□□ 0.7
CTSB-233	ENST00000534636	C4orf47	A7E2U8	309 aa		19.43	■□□□□ 0.7
CTSB-233	ENST00000534636	CACNG3	O60359	315 aa		19.43	■□□□□ 0.7
CTSB-233	ENST00000534636	CHRM1	P11229	460 aa	Predicted RBP	19.43	■□□□□ 0.7
CTSB-233	ENST00000534636	NTSR1	P30989	418 aa		19.43	■□□□□ 0.7
CTSB-233	ENST00000534636	KIF11	P52732	1056 aa		19.43	■□□□□ 0.7
CTSB-233	ENST00000534636	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	19.43	■□□□□ 0.7
CTSB-233	ENST00000534636	CCDC186	Q7Z3E2	898 aa		19.43	■□□□□ 0.7
CTSB-233	ENST00000534636	SMYD4	Q8IYR2	804 aa	Predicted RBP	19.43	■□□□□ 0.7
CTSB-233	ENST00000534636	CHPF	Q8IZ52	775 aa		19.43	■□□□□ 0.7
CTSB-233	ENST00000534636	ARHGAP18	Q8N392	663 aa		19.43	■□□□□ 0.7
CTSB-233	ENST00000534636	FAM124B	Q9H5Z6	455 aa	Predicted RBP	19.43	■□□□□ 0.7
CTSB-233	ENST00000534636	NMUR1	Q9HB89	426 aa		19.43	■□□□□ 0.7
CTSB-233	ENST00000534636	TMEM9B	Q9NQ34	198 aa		19.43	■□□□□ 0.7
CTSB-233	ENST00000534636	RAB20	Q9NX57	234 aa		19.43	■□□□□ 0.7
CTSB-233	ENST00000534636	ANGPTL2	Q9UKU9	493 aa		19.43	■□□□□ 0.7
CTSB-233	ENST00000534636	ZNF510	Q9Y2H8	683 aa		19.43	■□□□□ 0.7
CTSB-233	ENST00000534636	CEP295	Q9C0D2	2601 aa		19.43	■□□□□ 0.7
CTSB-233	ENST00000534636	TNRC6B	Q9UPQ9	1833 aa	Known RBP	19.42	■□□□□ 0.7
CTSB-233	ENST00000534636	TM4SF5	O14894	197 aa		19.42	■□□□□ 0.7
CTSB-233	ENST00000534636	MDM4	O15151	490 aa		19.42	■□□□□ 0.7
CTSB-233	ENST00000534636	DGKG	P49619	791 aa		19.42	■□□□□ 0.7
CTSB-233	ENST00000534636	DCAF17	Q5H9S7	520 aa	Predicted RBP	19.42	■□□□□ 0.7
CTSB-233	ENST00000534636	SPDYC	Q5MJ68	293 aa		19.42	■□□□□ 0.7
CTSB-233	ENST00000534636	TCERG1L	Q5VWI1	586 aa		19.42	■□□□□ 0.7
CTSB-233	ENST00000534636	LYSMD4	Q5XG99	296 aa		19.42	■□□□□ 0.7
CTSB-233	ENST00000534636	ARMCX6	Q7L4S7	300 aa		19.42	■□□□□ 0.7
CTSB-233	ENST00000534636	MIB1	Q86YT6	1006 aa		19.42	■□□□□ 0.7
CTSB-233	ENST00000534636	EEF2KMT	Q96G04	330 aa		19.42	■□□□□ 0.7
CTSB-233	ENST00000534636	NUSAP1	Q9BXS6	441 aa	Known RBP	19.42	■□□□□ 0.7
CTSB-233	ENST00000534636	GDPD2	Q9HCC8	539 aa		19.42	■□□□□ 0.7
CTSB-233	ENST00000534636	CISH	Q9NSE2	258 aa		19.42	■□□□□ 0.7
CTSB-233	ENST00000534636	CLIC5	Q9NZA1	410 aa		19.42	■□□□□ 0.7
CTSB-233	ENST00000534636	RASAL2	Q9UJF2	1139 aa		19.42	■□□□□ 0.7
CTSB-233	ENST00000534636	NUDT5	Q9UKK9	219 aa		19.42	■□□□□ 0.7
CTSB-233	ENST00000534636	STARD13	Q9Y3M8	1113 aa		19.42	■□□□□ 0.7
CTSB-233	ENST00000534636	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		19.41	■□□□□ 0.7
CTSB-233	ENST00000534636	SLC16A3	O15427	465 aa	Known RBP	19.41	■□□□□ 0.7
CTSB-233	ENST00000534636	AP5Z1	O43299	807 aa		19.41	■□□□□ 0.7
CTSB-233	ENST00000534636	GREM1	O60565	184 aa		19.41	■□□□□ 0.7
CTSB-233	ENST00000534636	KCNK5	O95279	499 aa		19.41	■□□□□ 0.7
CTSB-233	ENST00000534636	LMAN2	Q12907	356 aa		19.41	■□□□□ 0.7
CTSB-233	ENST00000534636	PNOC	Q13519	176 aa		19.41	■□□□□ 0.7
CTSB-233	ENST00000534636	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	19.41	■□□□□ 0.7
CTSB-233	ENST00000534636	PSAPL1	Q6NUJ1	521 aa		19.41	■□□□□ 0.7
CTSB-233	ENST00000534636	TMEFF1	Q8IYR6	380 aa		19.41	■□□□□ 0.7
CTSB-233	ENST00000534636	BHMT	Q93088	406 aa		19.41	■□□□□ 0.7
CTSB-233	ENST00000534636	TMEM176A	Q96HP8	235 aa		19.41	■□□□□ 0.7
CTSB-233	ENST00000534636	STRIP2	Q9ULQ0	834 aa		19.41	■□□□□ 0.7
CTSB-233	ENST00000534636	TRIM24	O15164	1050 aa		19.4	■□□□□ 0.7
CTSB-233	ENST00000534636	SMC2	O95347	1197 aa		19.4	■□□□□ 0.7
CTSB-233	ENST00000534636	WAS	P42768	502 aa		19.4	■□□□□ 0.7
CTSB-233	ENST00000534636	NOVA1	P51513	510 aa	Known RBP	19.4	■□□□□ 0.7
CTSB-233	ENST00000534636	YWHAE	P62258	255 aa	Known RBP	19.4	■□□□□ 0.7
CTSB-233	ENST00000534636	COG7	P83436	770 aa		19.4	■□□□□ 0.7
CTSB-233	ENST00000534636	RPL6	Q02878	288 aa	Known RBP	19.4	■□□□□ 0.7
CTSB-233	ENST00000534636	MAP7D1	Q3KQU3	841 aa		19.4	■□□□□ 0.7
CTSB-233	ENST00000534636	TRIM61	Q5EBN2	209 aa		19.4	■□□□□ 0.7
CTSB-233	ENST00000534636	EGFLAM	Q63HQ2	1017 aa		19.4	■□□□□ 0.7
CTSB-233	ENST00000534636	SLC36A4	Q6YBV0	504 aa		19.4	■□□□□ 0.7
CTSB-233	ENST00000534636		Q6ZNB5	142 aa		19.4	■□□□□ 0.7
CTSB-233	ENST00000534636	RSRC2	Q7L4I2	434 aa	Known RBP	19.4	■□□□□ 0.7
CTSB-233	ENST00000534636	SYT12	Q8IV01	421 aa		19.4	■□□□□ 0.7
CTSB-233	ENST00000534636	ZNF276	Q8N554	614 aa		19.4	■□□□□ 0.7
CTSB-233	ENST00000534636	SEMA4D	Q92854	862 aa		19.4	■□□□□ 0.7
CTSB-233	ENST00000534636	GTPBP4	Q9BZE4	634 aa	Known RBP	19.4	■□□□□ 0.7
CTSB-233	ENST00000534636	DCLK3	Q9C098	648 aa		19.4	■□□□□ 0.7
CTSB-233	ENST00000534636	CALCOCO1	Q9P1Z2	691 aa		19.4	■□□□□ 0.7
CTSB-233	ENST00000534636	EVL	Q9UI08	416 aa	Predicted RBP	19.4	■□□□□ 0.7
CTSB-233	ENST00000534636	HOOK1	Q9UJC3	728 aa	Known RBP	19.4	■□□□□ 0.7
CTSB-233	ENST00000534636	USP3	Q9Y6I4	520 aa		19.4	■□□□□ 0.7
CTSB-233	ENST00000534636	ASCC3	Q8N3C0	2202 aa	Known RBP	19.39	■□□□□ 0.69
CTSB-233	ENST00000534636	PATE3	B3GLJ2	98 aa		19.39	■□□□□ 0.69
CTSB-233	ENST00000534636	ZNF217	O75362	1048 aa		19.39	■□□□□ 0.69
CTSB-233	ENST00000534636	STC2	O76061	302 aa		19.39	■□□□□ 0.69
CTSB-233	ENST00000534636	GABRG2	P18507	467 aa		19.39	■□□□□ 0.69
CTSB-233	ENST00000534636	CHKA	P35790	457 aa		19.39	■□□□□ 0.69
CTSB-233	ENST00000534636	EFEMP1	Q12805	493 aa		19.39	■□□□□ 0.69
CTSB-233	ENST00000534636	ZNF658	Q5TYW1	1059 aa	Predicted RBP	19.39	■□□□□ 0.69
CTSB-233	ENST00000534636	SLC4A11	Q8NBS3	891 aa		19.39	■□□□□ 0.69
CTSB-233	ENST00000534636	GSDMA	Q96QA5	445 aa		19.39	■□□□□ 0.69
CTSB-233	ENST00000534636	ARID3A	Q99856	593 aa		19.39	■□□□□ 0.69
CTSB-233	ENST00000534636	MBD1	Q9UIS9	605 aa	Predicted RBP	19.39	■□□□□ 0.69
CTSB-233	ENST00000534636	KMT2B	Q9UMN6	2715 aa	Predicted RBP	19.38	■□□□□ 0.69
CTSB-233	ENST00000534636	CYBB	P04839	570 aa		19.38	■□□□□ 0.69
CTSB-233	ENST00000534636	PML	P29590	882 aa		19.38	■□□□□ 0.69

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