RNA–Protein interactions for RNA: ENST00000520267.5

COL13A1-213, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-213ENST00000520267 FAM47EQ6ZV65 393 aa26.73■■□□□ 1.87
COL13A1-213ENST00000520267 PIGZQ86VD9 579 aa26.73■■□□□ 1.87
COL13A1-213ENST00000520267 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP26.73■■□□□ 1.87
COL13A1-213ENST00000520267 XPO1O14980 1071 aaKnown RBP26.72■■□□□ 1.87
COL13A1-213ENST00000520267 ACAT1P24752 427 aaKnown RBP26.72■■□□□ 1.87
COL13A1-213ENST00000520267 FUKQ8N0W3 1084 aa26.72■■□□□ 1.87
COL13A1-213ENST00000520267 CCDC33Q8N5R6 958 aa26.72■■□□□ 1.87
COL13A1-213ENST00000520267 TOP6BLQ8N6T0 577 aa26.72■■□□□ 1.87
COL13A1-213ENST00000520267 SPOCK2Q92563 424 aa26.72■■□□□ 1.87
COL13A1-213ENST00000520267 SLC40A1Q9NP59 571 aa26.72■■□□□ 1.87
COL13A1-213ENST00000520267 SLC12A4Q9UP95 1085 aa26.72■■□□□ 1.87
COL13A1-213ENST00000520267 ARL2BPQ9Y2Y0 163 aa26.72■■□□□ 1.87
COL13A1-213ENST00000520267 TCRBV9S1A1TA0A576 114 aa26.72■■□□□ 1.87
COL13A1-213ENST00000520267 YWHAZP63104 245 aaKnown RBP26.72■■□□□ 1.87
COL13A1-213ENST00000520267 FAM133BQ5BKY9 247 aaKnown RBP26.72■■□□□ 1.87
COL13A1-213ENST00000520267 C17orf99Q6UX52 265 aa26.72■■□□□ 1.87
COL13A1-213ENST00000520267 RASAL3Q86YV0 1011 aa26.72■■□□□ 1.87
COL13A1-213ENST00000520267 PYROXD2Q8N2H3 581 aa26.72■■□□□ 1.87
COL13A1-213ENST00000520267 CSPG4P5Q96PW8 444 aa26.72■■□□□ 1.87
COL13A1-213ENST00000520267 HNRNPABQ99729 332 aaKnown RBP26.72■■□□□ 1.87
COL13A1-213ENST00000520267 PITPNM3Q9BZ71 974 aa26.72■■□□□ 1.87
COL13A1-213ENST00000520267 ETNK1Q9HBU6 452 aa26.72■■□□□ 1.87
COL13A1-213ENST00000520267 CACNG4Q9UBN1 327 aa26.72■■□□□ 1.87
COL13A1-213ENST00000520267 MYADML2A6NDP7 307 aa26.71■■□□□ 1.87
COL13A1-213ENST00000520267 BEST1O76090 585 aa26.71■■□□□ 1.87
COL13A1-213ENST00000520267 HNRNPH1P31943 449 aaKnown RBP26.71■■□□□ 1.87
COL13A1-213ENST00000520267 RGS2P41220 211 aa26.71■■□□□ 1.87
COL13A1-213ENST00000520267 YWHAGP61981 247 aaKnown RBP eCLIP26.71■■□□□ 1.87
COL13A1-213ENST00000520267 ADIGQ0VDE8 80 aa26.71■■□□□ 1.87
COL13A1-213ENST00000520267 CDKL3Q8IVW4 592 aaPredicted RBP26.71■■□□□ 1.87
COL13A1-213ENST00000520267 DEFB106AQ8N104 65 aa26.71■■□□□ 1.87
COL13A1-213ENST00000520267 PPP1R10Q96QC0 940 aaKnown RBP26.71■■□□□ 1.87
COL13A1-213ENST00000520267 CYTH2Q99418 400 aa26.71■■□□□ 1.87
COL13A1-213ENST00000520267 HAUS2Q9NVX0 235 aa26.71■■□□□ 1.87
COL13A1-213ENST00000520267 MEIS3P2A8K0S8 358 aa26.7■■□□□ 1.87
COL13A1-213ENST00000520267 CYB561D2O14569 222 aa26.7■■□□□ 1.87
COL13A1-213ENST00000520267 RASSF9O75901 435 aa26.7■■□□□ 1.87
COL13A1-213ENST00000520267 GNAT1P11488 350 aa26.7■■□□□ 1.87
COL13A1-213ENST00000520267 LRPAP1P30533 357 aa26.7■■□□□ 1.87
COL13A1-213ENST00000520267 MATKP42679 507 aa26.7■■□□□ 1.87
COL13A1-213ENST00000520267 DNAJC3Q13217 504 aa26.7■■□□□ 1.87
COL13A1-213ENST00000520267 EFHC1Q5JVL4 640 aa26.7■■□□□ 1.87
COL13A1-213ENST00000520267 PAQR9Q6ZVX9 377 aa26.7■■□□□ 1.87
COL13A1-213ENST00000520267 DUSP16Q9BY84 665 aa26.7■■□□□ 1.87
COL13A1-213ENST00000520267 DNAI2Q9GZS0 605 aa26.7■■□□□ 1.87
COL13A1-213ENST00000520267 KLC2Q9H0B6 622 aa26.7■■□□□ 1.87
COL13A1-213ENST00000520267 SSU72Q9NP77 194 aaKnown RBP26.7■■□□□ 1.87
COL13A1-213ENST00000520267 MFHAS1Q9Y4C4 1052 aa26.7■■□□□ 1.87
COL13A1-213ENST00000520267 TRPM7Q96QT4 1865 aa26.7■■□□□ 1.86
COL13A1-213ENST00000520267 DNAJC8O75937 253 aaPredicted RBP26.7■■□□□ 1.86
COL13A1-213ENST00000520267 AMPD1P23109 780 aa26.7■■□□□ 1.86
COL13A1-213ENST00000520267 CBLBQ13191 982 aa26.7■■□□□ 1.86
COL13A1-213ENST00000520267 SLC45A4Q5BKX6 768 aa26.7■■□□□ 1.86
COL13A1-213ENST00000520267 WSCD1Q658N2 575 aa26.7■■□□□ 1.86
COL13A1-213ENST00000520267 STRADAQ7RTN6 431 aa26.7■■□□□ 1.86
COL13A1-213ENST00000520267 CAND1Q86VP6 1230 aaKnown RBP26.7■■□□□ 1.86
COL13A1-213ENST00000520267 GTF2IRD1Q9UHL9 959 aa26.7■■□□□ 1.86
COL13A1-213ENST00000520267 UBOX5O94941 541 aa26.69■■□□□ 1.86
COL13A1-213ENST00000520267 IGHA2P01877 340 aa26.69■■□□□ 1.86
COL13A1-213ENST00000520267 APRTP07741 180 aa26.69■■□□□ 1.86
COL13A1-213ENST00000520267 GSTA1P08263 222 aa26.69■■□□□ 1.86
COL13A1-213ENST00000520267 ZNF157P51786 506 aaPredicted RBP26.69■■□□□ 1.86
COL13A1-213ENST00000520267 PDK4Q16654 411 aa26.69■■□□□ 1.86
COL13A1-213ENST00000520267 KBTBD12Q3ZCT8 623 aa26.69■■□□□ 1.86
COL13A1-213ENST00000520267 FAM131BQ86XD5 332 aa26.69■■□□□ 1.86
COL13A1-213ENST00000520267 FAM149B1Q96BN6 582 aa26.69■■□□□ 1.86
COL13A1-213ENST00000520267 CFAP36Q96G28 342 aa26.69■■□□□ 1.86
COL13A1-213ENST00000520267 KLF6Q99612 283 aaPredicted RBP26.69■■□□□ 1.86
COL13A1-213ENST00000520267 GOLGA8RI6L899 631 aa26.69■■□□□ 1.86
COL13A1-213ENST00000520267 METTL18O95568 372 aa26.69■■□□□ 1.86
COL13A1-213ENST00000520267 ZFXP17010 805 aaPredicted RBP26.69■■□□□ 1.86
COL13A1-213ENST00000520267 GOT1P17174 413 aa26.69■■□□□ 1.86
COL13A1-213ENST00000520267 PTPN1P18031 435 aaKnown RBP26.69■■□□□ 1.86
COL13A1-213ENST00000520267 MAGEA6P43360 314 aa26.69■■□□□ 1.86
COL13A1-213ENST00000520267 SULT1E1P49888 294 aa26.69■■□□□ 1.86
COL13A1-213ENST00000520267 PITX1P78337 314 aaPredicted RBP26.69■■□□□ 1.86
COL13A1-213ENST00000520267 NCBP2-AS2Q69YL0 99 aa26.69■■□□□ 1.86
COL13A1-213ENST00000520267 LVRNQ6Q4G3 990 aa26.69■■□□□ 1.86
COL13A1-213ENST00000520267 KCNT2Q6UVM3 1135 aa26.69■■□□□ 1.86
COL13A1-213ENST00000520267 APBA2Q99767 749 aa26.69■■□□□ 1.86
COL13A1-213ENST00000520267 ZNF638Q14966 1978 aaKnown RBP26.69■■□□□ 1.86
COL13A1-213ENST00000520267 NDUFV1P49821 464 aa26.68■■□□□ 1.86
COL13A1-213ENST00000520267 XRCC4Q13426 336 aa26.68■■□□□ 1.86
COL13A1-213ENST00000520267 SLC25A52Q3SY17 297 aa26.68■■□□□ 1.86
COL13A1-213ENST00000520267 HHATQ5VTY9 493 aa26.68■■□□□ 1.86
COL13A1-213ENST00000520267 KIAA0319Q5VV43 1072 aa26.68■■□□□ 1.86
COL13A1-213ENST00000520267 RGS9BPQ6ZS82 235 aa26.68■■□□□ 1.86
COL13A1-213ENST00000520267 PRPF39Q86UA1 669 aaKnown RBP26.68■■□□□ 1.86
COL13A1-213ENST00000520267 GRAMD1AQ96CP6 724 aa26.68■■□□□ 1.86
COL13A1-213ENST00000520267 RMDN2Q96LZ7 410 aa26.68■■□□□ 1.86
COL13A1-213ENST00000520267 SLCO1B3Q9NPD5 702 aa26.68■■□□□ 1.86
COL13A1-213ENST00000520267 FZD10Q9ULW2 581 aa26.68■■□□□ 1.86
COL13A1-213ENST00000520267 USP3Q9Y6I4 520 aa26.68■■□□□ 1.86
COL13A1-213ENST00000520267 GBP2P32456 591 aaPredicted RBP26.68■■□□□ 1.86
COL13A1-213ENST00000520267 MGAT5Q09328 741 aa26.68■■□□□ 1.86
COL13A1-213ENST00000520267 OTUD1Q5VV17 481 aaPredicted RBP26.68■■□□□ 1.86
COL13A1-213ENST00000520267 SLC44A1Q8WWI5 657 aa26.68■■□□□ 1.86
COL13A1-213ENST00000520267 FRMD8Q9BZ67 464 aaPredicted RBP26.68■■□□□ 1.86
COL13A1-213ENST00000520267 TMEM51Q9NW97 253 aa26.68■■□□□ 1.86
COL13A1-213ENST00000520267 CDY2AQ9Y6F7 541 aa26.68■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms