RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 TBCCD1Q9NVR7 557 aa4.32□□□□□ -1.72
TOPBP1-208ENST00000511439 MRPS18AQ9NVS2 196 aaKnown RBP4.32□□□□□ -1.72
TOPBP1-208ENST00000511439 GGA3Q9NZ52 723 aa4.32□□□□□ -1.72
TOPBP1-208ENST00000511439 CTTNBP2NLQ9P2B4 639 aa4.32□□□□□ -1.72
TOPBP1-208ENST00000511439 KCNE5Q9UJ90 142 aa4.32□□□□□ -1.72
TOPBP1-208ENST00000511439 CDYLQ9Y232 598 aa4.32□□□□□ -1.72
TOPBP1-208ENST00000511439 MAP3K2Q9Y2U5 619 aa4.32□□□□□ -1.72
TOPBP1-208ENST00000511439 PCDHGB6Q9Y5F9 930 aa4.32□□□□□ -1.72
TOPBP1-208ENST00000511439 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.32□□□□□ -1.72
TOPBP1-208ENST00000511439 BDP1A6H8Y1 2624 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 RIC1Q4ADV7 1423 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 ATRXP46100 2492 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 CCDC195A0A1B0GUA6 201 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 ANO9A1A5B4 782 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 UBE2Q2LH0YL09 131 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 INO80B-WBP1J3KQ70 363 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 APAF1O14727 1248 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 MGEA5O60502 916 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 KIF20AO95235 890 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 THP07101 528 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 PIM1P11309 404 aaPredicted RBP4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 SLC7A1P30825 629 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 ALDH1B1P30837 517 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 UBXN2AP68543 259 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 CXADRP78310 365 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 ZNF844Q08AG5 666 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 TBC1D9BQ66K14 1250 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 FOXR2Q6PJQ5 311 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 TMPRSS9Q7Z410 1059 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 KRT78Q8N1N4 520 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 PCSK9Q8NBP7 692 aaKnown RBP4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 NSUN7Q8NE18 718 aaKnown RBP4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 OR6B3Q8NGW1 331 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 POC1BQ8TC44 478 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 SUCLG2Q96I99 432 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 LRIG1Q96JA1 1093 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 TRIB1Q96RU8 372 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 SMOQ99835 787 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 CNPPD1Q9BV87 410 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 ALOXE3Q9BYJ1 711 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 INO80BQ9C086 356 aaPredicted RBP4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 NUP62CLQ9H1M0 184 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 VPS33BQ9H267 617 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 TTYH1Q9H313 450 aaPredicted RBP4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 PRDM13Q9H4Q3 707 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 TMEM74BQ9NUR3 256 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 ETAA1Q9NY74 926 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 CPNE7Q9UBL6 633 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 FAM50BQ9Y247 325 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 PLEKHM1Q9Y4G2 1056 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 NCOR1O75376 2440 aa4.31□□□□□ -1.72
TOPBP1-208ENST00000511439 LAMB2P55268 1798 aa4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 A0A1W2PP64 1363 aa4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 CENPJQ9HC77 1338 aaPredicted RBP4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 C5orf42Q9H799 3197 aa4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 A0A1W2PS29 197 aa4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 MYADML2A6NDP7 307 aa4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 ERVV-2B6SEH9 535 aa4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 M0QYG6 137 aa4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 BTN3A1O00481 513 aa4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 ZFPL1O95159 310 aa4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 UNC5CO95185 931 aa4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 SGPL1O95470 568 aa4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 SLC5A1P13866 664 aa4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 KCNA2P16389 499 aa4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 TOB1P50616 345 aaPredicted RBP4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 SUMO3P55854 103 aaPredicted RBP4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 FMO1Q01740 532 aa4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 ZNF169Q14929 603 aaPredicted RBP4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 CNGA2Q16280 664 aa4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 CYP2A13Q16696 494 aa4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 AAK1Q2M2I8 961 aa4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 FAM160B1Q5W0V3 765 aa4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 TAPT1Q6NXT6 567 aa4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 ZNF783Q6ZMS7 281 aa4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 Q6ZNX1 250 aa4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 C11orf96Q7Z7L8 435 aa4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 FAM98AQ8NCA5 519 aaKnown RBP4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 PPM1EQ8WY54 764 aa4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 MAML1Q92585 1016 aa4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 NACC2Q96BF6 587 aa4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 NAF1Q96HR8 494 aaKnown RBP4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 Q96MF0 132 aa4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 APOL5Q9BWW9 433 aa4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 SMURF2Q9HAU4 748 aa4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 KIAA1586Q9HCI6 787 aa4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 GALNT9Q9HCQ5 603 aa4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 LRIT1Q9P2V4 623 aa4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 DMTF1Q9Y222 760 aa4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 MTO1Q9Y2Z2 717 aaKnown RBP4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 NEU2Q9Y3R4 380 aa4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 KMT2BQ9UMN6 2715 aaPredicted RBP4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 CFAP54Q96N23 3096 aa4.3□□□□□ -1.72
TOPBP1-208ENST00000511439 EVC2Q86UK5 1308 aa4.29□□□□□ -1.72
TOPBP1-208ENST00000511439 A0A087WWL8 130 aa4.29□□□□□ -1.72
TOPBP1-208ENST00000511439 PRAMEF33A0A0G2JMD5 474 aa4.29□□□□□ -1.72
TOPBP1-208ENST00000511439 E7ENX8 843 aa4.29□□□□□ -1.72
TOPBP1-208ENST00000511439 PMM2O15305 246 aa4.29□□□□□ -1.72
TOPBP1-208ENST00000511439 PLIN1O60240 522 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms