RNA–Protein interactions for RNA: ENST00000509743.6

SSBP2-213, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 779 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-213ENST00000509743 PGAP3Q96FM1 320 aaPredicted RBP8.17□□□□□ -1.1
SSBP2-213ENST00000509743 CSPG4P5Q96PW8 444 aa8.17□□□□□ -1.1
SSBP2-213ENST00000509743 KCTD15Q96SI1 283 aaPredicted RBP8.17□□□□□ -1.1
SSBP2-213ENST00000509743 RBM15Q96T37 977 aaKnown RBP eCLIP8.17□□□□□ -1.1
SSBP2-213ENST00000509743 PKMYT1Q99640 499 aa8.17□□□□□ -1.1
SSBP2-213ENST00000509743 FERMT1Q9BQL6 677 aa8.17□□□□□ -1.1
SSBP2-213ENST00000509743 RTP3Q9BQQ7 232 aa8.17□□□□□ -1.1
SSBP2-213ENST00000509743 PAAF1Q9BRP4 392 aa8.17□□□□□ -1.1
SSBP2-213ENST00000509743 ULBP1Q9BZM6 244 aa8.17□□□□□ -1.1
SSBP2-213ENST00000509743 RAB6CQ9H0N0 254 aa8.17□□□□□ -1.1
SSBP2-213ENST00000509743 DHX35Q9H5Z1 703 aaKnown RBP8.17□□□□□ -1.1
SSBP2-213ENST00000509743 NRDE2Q9H7Z3 1164 aa8.17□□□□□ -1.1
SSBP2-213ENST00000509743 PAK5Q9P286 719 aa8.17□□□□□ -1.1
SSBP2-213ENST00000509743 BCCIPQ9P287 314 aaKnown RBP eCLIP8.17□□□□□ -1.1
SSBP2-213ENST00000509743 CACNG4Q9UBN1 327 aa8.17□□□□□ -1.1
SSBP2-213ENST00000509743 FZD10Q9ULW2 581 aa8.17□□□□□ -1.1
SSBP2-213ENST00000509743 FARP1Q9Y4F1 1045 aaPredicted RBP8.17□□□□□ -1.1
SSBP2-213ENST00000509743 TIMM13Q9Y5L4 95 aaPredicted RBP8.17□□□□□ -1.1
SSBP2-213ENST00000509743 A0A087WUV0 522 aaPredicted RBP8.16□□□□□ -1.1
SSBP2-213ENST00000509743 HHLA1C9JL84 531 aa8.16□□□□□ -1.1
SSBP2-213ENST00000509743 I3L4J1 428 aa8.16□□□□□ -1.1
SSBP2-213ENST00000509743 M0QYT0 321 aa8.16□□□□□ -1.1
SSBP2-213ENST00000509743 CAPN9O14815 690 aa8.16□□□□□ -1.1
SSBP2-213ENST00000509743 SYN3O14994 580 aa8.16□□□□□ -1.1
SSBP2-213ENST00000509743 ALOX15BO15296 676 aa8.16□□□□□ -1.1
SSBP2-213ENST00000509743 BEST1O76090 585 aa8.16□□□□□ -1.1
SSBP2-213ENST00000509743 PARNO95453 639 aaKnown RBP8.16□□□□□ -1.1
SSBP2-213ENST00000509743 ACSL3O95573 720 aa8.16□□□□□ -1.1
SSBP2-213ENST00000509743 F9P00740 461 aa8.16□□□□□ -1.1
SSBP2-213ENST00000509743 ZSCAN5DPP0CG00 497 aa8.16□□□□□ -1.1
SSBP2-213ENST00000509743 ETS1P14921 441 aa8.16□□□□□ -1.1
SSBP2-213ENST00000509743 TFE3P19532 575 aaPredicted RBP8.16□□□□□ -1.1
SSBP2-213ENST00000509743 IBSPP21815 317 aaPredicted RBP8.16□□□□□ -1.1
SSBP2-213ENST00000509743 IGFBP6P24592 240 aaPredicted RBP8.16□□□□□ -1.1
SSBP2-213ENST00000509743 HPDP32754 393 aaPredicted RBP8.16□□□□□ -1.1
SSBP2-213ENST00000509743 MDH1P40925 334 aaKnown RBP8.16□□□□□ -1.1
SSBP2-213ENST00000509743 CTCFP49711 727 aaPredicted RBP8.16□□□□□ -1.1
SSBP2-213ENST00000509743 MAGOHP61326 146 aaKnown RBP8.16□□□□□ -1.1
SSBP2-213ENST00000509743 PPP2R2AP63151 447 aa8.16□□□□□ -1.1
SSBP2-213ENST00000509743 GNGT1P63211 74 aa8.16□□□□□ -1.1
SSBP2-213ENST00000509743 YWHAHQ04917 246 aaPredicted RBP8.16□□□□□ -1.1
SSBP2-213ENST00000509743 DEUP1Q05D60 604 aa8.16□□□□□ -1.1
SSBP2-213ENST00000509743 SCAPQ12770 1279 aa8.16□□□□□ -1.1
SSBP2-213ENST00000509743 CBLBQ13191 982 aa8.16□□□□□ -1.1
SSBP2-213ENST00000509743 HIF1AQ16665 826 aa8.16□□□□□ -1.1
SSBP2-213ENST00000509743 KYNUQ16719 465 aa8.16□□□□□ -1.1
SSBP2-213ENST00000509743 KCTD19Q17RG1 926 aaPredicted RBP8.16□□□□□ -1.1
SSBP2-213ENST00000509743 ARL13BQ3SXY8 428 aa8.16□□□□□ -1.1
SSBP2-213ENST00000509743 PPP6R3Q5H9R7 873 aaPredicted RBP8.16□□□□□ -1.1
SSBP2-213ENST00000509743 EFHC2Q5JST6 749 aa8.16□□□□□ -1.1
SSBP2-213ENST00000509743 CLLU1OSQ5K130 101 aa8.16□□□□□ -1.1
SSBP2-213ENST00000509743 OTUD1Q5VV17 481 aaPredicted RBP8.16□□□□□ -1.1
SSBP2-213ENST00000509743 PM20D1Q6GTS8 502 aa8.16□□□□□ -1.1
SSBP2-213ENST00000509743 C1orf228Q6PIY5 440 aa8.16□□□□□ -1.1
SSBP2-213ENST00000509743 CD300LGQ6UXG3 332 aa8.16□□□□□ -1.1
SSBP2-213ENST00000509743 PDZD4Q76G19 769 aaPredicted RBP8.16□□□□□ -1.1
SSBP2-213ENST00000509743 TAOK1Q7L7X3 1001 aa8.16□□□□□ -1.1
SSBP2-213ENST00000509743 RTN4RL1Q86UN2 441 aaPredicted RBP8.16□□□□□ -1.1
SSBP2-213ENST00000509743 FAM131BQ86XD5 332 aa8.16□□□□□ -1.1
SSBP2-213ENST00000509743 SPATA2LQ8IUW3 424 aaPredicted RBP8.16□□□□□ -1.1
SSBP2-213ENST00000509743 UNC45BQ8IWX7 931 aa8.16□□□□□ -1.1
SSBP2-213ENST00000509743 CCDC185Q8N715 623 aa8.16□□□□□ -1.1
SSBP2-213ENST00000509743 GLIS1Q8NBF1 620 aa8.16□□□□□ -1.1
SSBP2-213ENST00000509743 ZMIZ2Q8NF64 920 aa8.16□□□□□ -1.1
SSBP2-213ENST00000509743 CPT1BQ92523 772 aa8.16□□□□□ -1.1
SSBP2-213ENST00000509743 SEPT8Q92599 483 aa8.16□□□□□ -1.1
SSBP2-213ENST00000509743 QKIQ96PU8 341 aaKnown RBP eCLIP8.16□□□□□ -1.1
SSBP2-213ENST00000509743 FAM193BQ96PV7 902 aaPredicted RBP8.16□□□□□ -1.1
SSBP2-213ENST00000509743 SAYSD1Q9NPB0 183 aa8.16□□□□□ -1.1
SSBP2-213ENST00000509743 MTMR10Q9NXD2 777 aa8.16□□□□□ -1.1
SSBP2-213ENST00000509743 SAE1Q9UBE0 346 aaPredicted RBP8.16□□□□□ -1.1
SSBP2-213ENST00000509743 NOVA2Q9UNW9 492 aaKnown RBP8.16□□□□□ -1.1
SSBP2-213ENST00000509743 HEY1Q9Y5J3 304 aa8.16□□□□□ -1.1
SSBP2-213ENST00000509743 RAD54BQ9Y620 910 aa8.16□□□□□ -1.1
SSBP2-213ENST00000509743 UTRNP46939 3433 aa8.15□□□□□ -1.1
SSBP2-213ENST00000509743 TLDC2A0PJX2 215 aa8.15□□□□□ -1.1
SSBP2-213ENST00000509743 E7ESA3 106 aa8.15□□□□□ -1.1
SSBP2-213ENST00000509743 NRP1O14786 923 aa8.15□□□□□ -1.1
SSBP2-213ENST00000509743 CHADO15335 359 aa8.15□□□□□ -1.1
SSBP2-213ENST00000509743 KCNN4O15554 427 aa8.15□□□□□ -1.1
SSBP2-213ENST00000509743 CDH16O75309 829 aa8.15□□□□□ -1.1
SSBP2-213ENST00000509743 STK10O94804 968 aaKnown RBP8.15□□□□□ -1.1
SSBP2-213ENST00000509743 OAZ2O95190 189 aa8.15□□□□□ -1.1
SSBP2-213ENST00000509743 YY1P25490 414 aa8.15□□□□□ -1.1
SSBP2-213ENST00000509743 PHBP35232 272 aa8.15□□□□□ -1.1
SSBP2-213ENST00000509743 ADRA1BP35368 520 aa8.15□□□□□ -1.1
SSBP2-213ENST00000509743 HCAR3P49019 387 aa8.15□□□□□ -1.1
SSBP2-213ENST00000509743 NDUFV1P49821 464 aa8.15□□□□□ -1.1
SSBP2-213ENST00000509743 ATP1A2P50993 1020 aa8.15□□□□□ -1.1
SSBP2-213ENST00000509743 IRAK1P51617 712 aa8.15□□□□□ -1.1
SSBP2-213ENST00000509743 GDF10P55107 478 aa8.15□□□□□ -1.1
SSBP2-213ENST00000509743 RNASELQ05823 741 aaKnown RBP8.15□□□□□ -1.1
SSBP2-213ENST00000509743 NR1H3Q13133 447 aa8.15□□□□□ -1.1
SSBP2-213ENST00000509743 RASA2Q15283 850 aa8.15□□□□□ -1.1
SSBP2-213ENST00000509743 NFE2Q16621 373 aaPredicted RBP8.15□□□□□ -1.1
SSBP2-213ENST00000509743 PAN2Q504Q3 1202 aaKnown RBP8.15□□□□□ -1.1
SSBP2-213ENST00000509743 PLEKHG4Q58EX7 1191 aa8.15□□□□□ -1.1
SSBP2-213ENST00000509743 SLC45A4Q5BKX6 768 aa8.15□□□□□ -1.1
SSBP2-213ENST00000509743 DNAJC21Q5F1R6 531 aaKnown RBP8.15□□□□□ -1.1
SSBP2-213ENST00000509743 TNFAIP8L3Q5GJ75 292 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms