RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 GDAP1Q8TB36 358 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 DEPTORQ8TB45 409 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 AGR3Q8TD06 166 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 BCAS4Q8TDM0 211 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 LZICQ8WZA0 190 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 RAPGEF5Q92565 580 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 ANAPC16Q96DE5 110 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 VPS50Q96JG6 964 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 SNX27Q96L92 541 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 CMTM3Q96MX0 182 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 TMEM237Q96Q45 408 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 SDF4Q9BRK5 362 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 ACPTQ9BZG2 426 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 TRIM4Q9C037 500 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 FANCEQ9HB96 536 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 PDE11AQ9HCR9 933 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 COPRSQ9NQ92 184 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 ZNF277Q9NRM2 450 aaPredicted RBP4.79□□□□□ -1.64
NIPBL-206ENST00000509429 VPS45Q9NRW7 570 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 NMRK1Q9NWW6 199 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 TRPM5Q9NZQ8 1165 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 EMC3Q9P0I2 261 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 CLEC1BQ9P126 229 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 IFT80Q9P2H3 777 aaPredicted RBP4.79□□□□□ -1.64
NIPBL-206ENST00000509429 MOSPD1Q9UJG1 213 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 SATB2Q9UPW6 733 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 C15orf41Q9Y2V0 281 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 SPEF1Q9Y4P9 236 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 CROCC2H7BZ55 1655 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 MIA2Q96PC5 1412 aa4.79□□□□□ -1.64
NIPBL-206ENST00000509429 ADAMTS12P58397 1594 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 KDM2BQ8NHM5 1336 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 COL4A3Q01955 1670 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 LOC100653049A0A140TA62 436 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 EME2A4GXA9 379 aaPredicted RBP4.78□□□□□ -1.64
NIPBL-206ENST00000509429 LRRIQ4A6NIV6 560 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 PRR5-ARHGAP8B1AHC4 643 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 PALM2-AKAP2B1ALY0 433 aaPredicted RBP4.78□□□□□ -1.64
NIPBL-206ENST00000509429 STX16-NPEPL1H3BU86 382 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 TRAF5O00463 557 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 SMAD7O15105 426 aaKnown RBP4.78□□□□□ -1.64
NIPBL-206ENST00000509429 GPR39O43194 453 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 THAP12O43422 761 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 KCNAB3O43448 404 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 CBFA2T3O75081 653 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 KRT34O76011 436 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 ALDH1A2O94788 518 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 LARGE1O95461 756 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 HEXBP07686 556 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 CYP3A4P08684 503 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 LTA4HP09960 611 aaKnown RBP4.78□□□□□ -1.64
NIPBL-206ENST00000509429 SRGAP2BP0DMP2 458 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 PDHBP11177 359 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 LPOP22079 712 aaPredicted RBP4.78□□□□□ -1.64
NIPBL-206ENST00000509429 KELP23276 732 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 MAPK3P27361 379 aaPredicted RBP4.78□□□□□ -1.64
NIPBL-206ENST00000509429 PSMC2P35998 433 aaKnown RBP4.78□□□□□ -1.64
NIPBL-206ENST00000509429 CPA2P48052 419 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 SCNN1GP51170 649 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 PLCD1P51178 756 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 CLCN4P51793 760 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 SSTP61278 116 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 AMPD2Q01433 879 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 NCBP1Q09161 790 aaKnown RBP4.78□□□□□ -1.64
NIPBL-206ENST00000509429 HSPA14Q0VDF9 509 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 SLC14A1Q13336 389 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 GNA13Q14344 377 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 CCDC57Q2TAC2 916 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 LETM2Q2VYF4 491 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 Q3ZCU0 254 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 CFAP100Q494V2 611 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 CCDC40Q4G0X9 1142 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 CEP78Q5JTW2 689 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 RNF219Q5W0B1 726 aaPredicted RBP4.78□□□□□ -1.64
NIPBL-206ENST00000509429 KANK2Q63ZY3 851 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 SP5Q6BEB4 398 aaPredicted RBP4.78□□□□□ -1.64
NIPBL-206ENST00000509429 FAM173BQ6P4H8 233 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 OLFM4Q6UX06 510 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 NLRP9Q7RTR0 991 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 UNC45BQ8IWX7 931 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 SLC15A3Q8IY34 581 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 Q8N1Y9 231 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 SYT2Q8N9I0 419 aaPredicted RBP4.78□□□□□ -1.64
NIPBL-206ENST00000509429 ZNF565Q8N9K5 539 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 KCNH5Q8NCM2 988 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 OR8K3Q8NH51 312 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 CEP70Q8NHQ1 597 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 FAM216AQ8WUB2 273 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 SLC25A43Q8WUT9 341 aaPredicted RBP4.78□□□□□ -1.64
NIPBL-206ENST00000509429 ZFAND2BQ8WV99 257 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 TUBGCP3Q96CW5 907 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 C11orf24Q96F05 449 aaPredicted RBP4.78□□□□□ -1.64
NIPBL-206ENST00000509429 ART5Q96L15 291 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 TCEANC2Q96MN5 208 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 FAM193BQ96PV7 902 aaPredicted RBP4.78□□□□□ -1.64
NIPBL-206ENST00000509429 SPON2Q9BUD6 331 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 MLST8Q9BVC4 326 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 PHF20Q9BVI0 1012 aa4.78□□□□□ -1.64
NIPBL-206ENST00000509429 TARS2Q9BW92 718 aaKnown RBP4.78□□□□□ -1.64
NIPBL-206ENST00000509429 ACAT2Q9BWD1 397 aa4.78□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms