RNA–Protein interactions for RNA: ENST00000483925.1

PTCD3-214, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 576 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-214ENST00000483925 VIPP01282 170 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 GJB1P08034 283 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 UBL4AP11441 157 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 CYP2C9P11712 490 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 EEF1DP29692 281 aaKnown RBP4.86□□□□□ -1.63
PTCD3-214ENST00000483925 PSMB10P40306 273 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 WNT3P56703 355 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 ABHD18Q0P651 414 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 ASIC2Q16515 512 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 C1orf141Q5JVX7 400 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 CCDC158Q5M9N0 1113 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 PRAMEF14Q5SWL7 426 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 CYP20A1Q6UW02 462 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 FAM47EQ6ZV65 393 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 RAPH1Q70E73 1250 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 H1FNTQ75WM6 255 aaPredicted RBP4.86□□□□□ -1.63
PTCD3-214ENST00000483925 SZRD1Q7Z422 152 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 LCA5Q86VQ0 697 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 PDSS2Q86YH6 399 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 PLXDC1Q8IUK5 500 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 BRSK2Q8IWQ3 736 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 UNC45BQ8IWX7 931 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 ULK2Q8IYT8 1036 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 FUKQ8N0W3 1084 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 OR8H3Q8N146 312 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 CARNMT1Q8N4J0 409 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 GOT1L1Q8NHS2 421 aaPredicted RBP4.86□□□□□ -1.63
PTCD3-214ENST00000483925 MGARPQ8TDB4 240 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 EXTL1Q92935 676 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 GRAMD1AQ96CP6 724 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 ZNF845Q96IR2 970 aaPredicted RBP4.86□□□□□ -1.63
PTCD3-214ENST00000483925 UIMC1Q96RL1 719 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 TTPALQ9BTX7 342 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 PACSIN1Q9BY11 444 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 SIK2Q9H0K1 926 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 ERVMER34-1Q9H9K5 563 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 VEZTQ9HBM0 779 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 XPNPEP3Q9NQH7 507 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 TLR9Q9NR96 1032 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 TMLHEQ9NVH6 421 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 HCFC1R1Q9NWW0 138 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 PPP1R14DQ9NXH3 145 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 GPRC5DQ9NZD1 345 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 SEL1LQ9UBV2 794 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 HSF4Q9ULV5 492 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 NFU1Q9UMS0 254 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 CAMK2AQ9UQM7 478 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 RUSC2Q8N2Y8 1516 aa4.86□□□□□ -1.63
PTCD3-214ENST00000483925 OR2W5A6NFC9 320 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 AGAP14A8MT82 685 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 H0Y626 953 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 STX16-NPEPL1H3BU86 382 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 STX16O14662 325 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 KLK10O43240 276 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 HMMRO75330 724 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 RAD17O75943 681 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 DNAJB5O75953 348 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 ZNF202O95125 648 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 CPA1P15085 419 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 CR2P20023 1033 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 ACO1P21399 889 aaKnown RBP4.85□□□□□ -1.63
PTCD3-214ENST00000483925 MST1P26927 711 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 PCSK1P29120 753 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 AKT1P31749 480 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 ACSL1P33121 698 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 PTPN7P35236 360 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 ARL1P40616 181 aaPredicted RBP4.85□□□□□ -1.63
PTCD3-214ENST00000483925 PHKA1P46020 1223 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 BPIFB3P59826 476 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 RPS3AP61247 264 aaKnown RBP4.85□□□□□ -1.63
PTCD3-214ENST00000483925 SP140Q13342 867 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 ADAM15Q13444 863 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 BTBD16Q32M84 506 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 DNAJC21Q5F1R6 531 aaKnown RBP4.85□□□□□ -1.63
PTCD3-214ENST00000483925 ZMAT1Q5H9K5 638 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 DEPDC1Q5TB30 811 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 ISM2Q6H9L7 571 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 SLC22A25Q6T423 547 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 IL27RAQ6UWB1 636 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 SYT13Q7L8C5 426 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 DNAJB7Q7Z6W7 309 aaPredicted RBP4.85□□□□□ -1.63
PTCD3-214ENST00000483925 KCTD6Q8NC69 237 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 ZCCHC10Q8TBK6 192 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 KCNG4Q8TDN1 519 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 SLC22A17Q8WUG5 538 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 ZNF653Q96CK0 615 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 MOGAT1Q96PD6 335 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 SPAG5Q96R06 1193 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 DESI2Q9BSY9 194 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 C2orf40Q9H1Z8 148 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 MUC13Q9H3R2 512 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 XPR1Q9UBH6 696 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 PA2G4Q9UQ80 394 aaKnown RBP4.85□□□□□ -1.63
PTCD3-214ENST00000483925 NAALADL1Q9UQQ1 740 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 ACTL7AQ9Y615 435 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 ZFP37Q9Y6Q3 630 aaPredicted RBP4.85□□□□□ -1.63
PTCD3-214ENST00000483925 PIAS3Q9Y6X2 628 aa4.85□□□□□ -1.63
PTCD3-214ENST00000483925 FLT1P17948 1338 aa4.84□□□□□ -1.63
PTCD3-214ENST00000483925 WDR33Q9C0J8 1336 aaKnown RBP4.84□□□□□ -1.63
PTCD3-214ENST00000483925 PNMA6EA0A0J9YXQ4 647 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms