RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 SH3BP1Q9Y3L3 701 aa10.32□□□□□ -0.76
SMARCB1-206ENST00000477836 GFRA2O00451 464 aa10.31□□□□□ -0.76
SMARCB1-206ENST00000477836 PAPSS1O43252 624 aaPredicted RBP10.31□□□□□ -0.76
SMARCB1-206ENST00000477836 HCRTO43612 131 aa10.31□□□□□ -0.76
SMARCB1-206ENST00000477836 TRAK2O60296 914 aa10.31□□□□□ -0.76
SMARCB1-206ENST00000477836 HUS1O60921 280 aa10.31□□□□□ -0.76
SMARCB1-206ENST00000477836 GADD45BO75293 160 aaPredicted RBP10.31□□□□□ -0.76
SMARCB1-206ENST00000477836 OR52Z1P0C646 297 aa10.31□□□□□ -0.76
SMARCB1-206ENST00000477836 ACADMP11310 421 aa10.31□□□□□ -0.76
SMARCB1-206ENST00000477836 PLS3P13797 630 aa10.31□□□□□ -0.76
SMARCB1-206ENST00000477836 MAGEA11P43364 429 aa10.31□□□□□ -0.76
SMARCB1-206ENST00000477836 GRIA4P48058 902 aa10.31□□□□□ -0.76
SMARCB1-206ENST00000477836 PPP3CCP48454 512 aa10.31□□□□□ -0.76
SMARCB1-206ENST00000477836 KLHL40Q2TBA0 621 aa10.31□□□□□ -0.76
SMARCB1-206ENST00000477836 PRAMEF14Q5SWL7 426 aa10.31□□□□□ -0.76
SMARCB1-206ENST00000477836 CCDC73Q6ZRK6 1079 aa10.31□□□□□ -0.76
SMARCB1-206ENST00000477836 C1orf186Q6ZWK4 172 aa10.31□□□□□ -0.76
SMARCB1-206ENST00000477836 ADAT2Q7Z6V5 191 aaKnown RBP10.31□□□□□ -0.76
SMARCB1-206ENST00000477836 TMPRSS6Q8IU80 811 aa10.31□□□□□ -0.76
SMARCB1-206ENST00000477836 BBS7Q8IWZ6 715 aa10.31□□□□□ -0.76
SMARCB1-206ENST00000477836 KCNE4Q8WWG9 221 aa10.31□□□□□ -0.76
SMARCB1-206ENST00000477836 TSC1Q92574 1164 aa10.31□□□□□ -0.76
SMARCB1-206ENST00000477836 PRCCQ92733 491 aaPredicted RBP10.31□□□□□ -0.76
SMARCB1-206ENST00000477836 SIPA1Q96FS4 1042 aa10.31□□□□□ -0.76
SMARCB1-206ENST00000477836 ZNF560Q96MR9 790 aa10.31□□□□□ -0.76
SMARCB1-206ENST00000477836 ZNF578Q96N58 590 aaPredicted RBP10.31□□□□□ -0.76
SMARCB1-206ENST00000477836 XPO6Q96QU8 1125 aaKnown RBP10.31□□□□□ -0.76
SMARCB1-206ENST00000477836 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.31□□□□□ -0.76
SMARCB1-206ENST00000477836 C6orf106Q9H6K1 298 aaPredicted RBP10.31□□□□□ -0.76
SMARCB1-206ENST00000477836 MAGEC2Q9UBF1 373 aaPredicted RBP10.31□□□□□ -0.76
SMARCB1-206ENST00000477836 KCNG1Q9UIX4 513 aa10.31□□□□□ -0.76
SMARCB1-206ENST00000477836 FBXO2Q9UK22 296 aaPredicted RBP10.31□□□□□ -0.76
SMARCB1-206ENST00000477836 CLCA2Q9UQC9 943 aa10.31□□□□□ -0.76
SMARCB1-206ENST00000477836 C2CD2Q9Y426 696 aa10.31□□□□□ -0.76
SMARCB1-206ENST00000477836 STON1Q9Y6Q2 735 aa10.31□□□□□ -0.76
SMARCB1-206ENST00000477836 A0A1B0GTQ1 180 aa10.3□□□□□ -0.76
SMARCB1-206ENST00000477836 A0A1W2PQ27 194 aa10.3□□□□□ -0.76
SMARCB1-206ENST00000477836 A0A1W2PQ64 194 aa10.3□□□□□ -0.76
SMARCB1-206ENST00000477836 NEDD8-MDP1E9PL57 170 aa10.3□□□□□ -0.76
SMARCB1-206ENST00000477836 TULP1O00294 542 aaPredicted RBP10.3□□□□□ -0.76
SMARCB1-206ENST00000477836 HNRNPDLO14979 420 aaKnown RBP10.3□□□□□ -0.76
SMARCB1-206ENST00000477836 CUTAO60888 179 aa10.3□□□□□ -0.76
SMARCB1-206ENST00000477836 ITGAVP06756 1048 aa10.3□□□□□ -0.76
SMARCB1-206ENST00000477836 MYF5P13349 255 aa10.3□□□□□ -0.76
SMARCB1-206ENST00000477836 ABCB4P21439 1286 aa10.3□□□□□ -0.76
SMARCB1-206ENST00000477836 BDNFP23560 247 aa10.3□□□□□ -0.76
SMARCB1-206ENST00000477836 ANXA13P27216 316 aa10.3□□□□□ -0.76
SMARCB1-206ENST00000477836 CDC25AP30304 524 aa10.3□□□□□ -0.76
SMARCB1-206ENST00000477836 CTSKP43235 329 aa10.3□□□□□ -0.76
SMARCB1-206ENST00000477836 NFKB2Q00653 900 aa10.3□□□□□ -0.76
SMARCB1-206ENST00000477836 IFRD2Q12894 506 aaPredicted RBP10.3□□□□□ -0.76
SMARCB1-206ENST00000477836 C4orf17Q53FE4 359 aa10.3□□□□□ -0.76
SMARCB1-206ENST00000477836 ARL6IP4Q66PJ3 421 aaKnown RBP10.3□□□□□ -0.76
SMARCB1-206ENST00000477836 KDM7AQ6ZMT4 941 aa10.3□□□□□ -0.76
SMARCB1-206ENST00000477836 ATG14Q6ZNE5 492 aa10.3□□□□□ -0.76
SMARCB1-206ENST00000477836 C4orf50Q6ZRC1 276 aa10.3□□□□□ -0.76
SMARCB1-206ENST00000477836 OSTM1Q86WC4 334 aa10.3□□□□□ -0.76
SMARCB1-206ENST00000477836 EID2Q8N6I1 236 aa10.3□□□□□ -0.76
SMARCB1-206ENST00000477836 SNX29Q8TEQ0 813 aa10.3□□□□□ -0.76
SMARCB1-206ENST00000477836 SNRNP27Q8WVK2 155 aaKnown RBP10.3□□□□□ -0.76
SMARCB1-206ENST00000477836 HIC2Q96JB3 615 aa10.3□□□□□ -0.76
SMARCB1-206ENST00000477836 TTLL2Q9BWV7 592 aa10.3□□□□□ -0.76
SMARCB1-206ENST00000477836 ASB7Q9H672 318 aa10.3□□□□□ -0.76
SMARCB1-206ENST00000477836 OSGEPQ9NPF4 335 aa10.3□□□□□ -0.76
SMARCB1-206ENST00000477836 KCNK4Q9NYG8 393 aa10.3□□□□□ -0.76
SMARCB1-206ENST00000477836 EHD2Q9NZN4 543 aa10.3□□□□□ -0.76
SMARCB1-206ENST00000477836 LRWD1Q9UFC0 647 aa10.3□□□□□ -0.76
SMARCB1-206ENST00000477836 PCDHA7Q9UN72 937 aa10.3□□□□□ -0.76
SMARCB1-206ENST00000477836 MYH11P35749 1972 aa10.3□□□□□ -0.76
SMARCB1-206ENST00000477836 A0A0B4J269 797 aa10.29□□□□□ -0.76
SMARCB1-206ENST00000477836 DFNA5O60443 496 aa10.29□□□□□ -0.76
SMARCB1-206ENST00000477836 ATP2C2O75185 946 aa10.29□□□□□ -0.76
SMARCB1-206ENST00000477836 IGLV3-19P01714 112 aa10.29□□□□□ -0.76
SMARCB1-206ENST00000477836 IRF1P10914 325 aa10.29□□□□□ -0.76
SMARCB1-206ENST00000477836 TYRP14679 529 aa10.29□□□□□ -0.76
SMARCB1-206ENST00000477836 PRPHP41219 470 aa10.29□□□□□ -0.76
SMARCB1-206ENST00000477836 PNPLA4P41247 253 aa10.29□□□□□ -0.76
SMARCB1-206ENST00000477836 DGKGP49619 791 aa10.29□□□□□ -0.76
SMARCB1-206ENST00000477836 ACOT2P49753 483 aa10.29□□□□□ -0.76
SMARCB1-206ENST00000477836 TAF10Q12962 218 aa10.29□□□□□ -0.76
SMARCB1-206ENST00000477836 ORC1Q13415 861 aa10.29□□□□□ -0.76
SMARCB1-206ENST00000477836 UBAP2LQ14157 1087 aaKnown RBP10.29□□□□□ -0.76
SMARCB1-206ENST00000477836 ADALQ6DHV7 355 aa10.29□□□□□ -0.76
SMARCB1-206ENST00000477836 VSTM1Q6UX27 236 aa10.29□□□□□ -0.76
SMARCB1-206ENST00000477836 TMEM86AQ8N2M4 240 aa10.29□□□□□ -0.76
SMARCB1-206ENST00000477836 GPT2Q8TD30 523 aa10.29□□□□□ -0.76
SMARCB1-206ENST00000477836 MYLPFQ96A32 169 aa10.29□□□□□ -0.76
SMARCB1-206ENST00000477836 SYAP1Q96A49 352 aaPredicted RBP10.29□□□□□ -0.76
SMARCB1-206ENST00000477836 TIPINQ9BVW5 301 aa10.29□□□□□ -0.76
SMARCB1-206ENST00000477836 BBS2Q9BXC9 721 aa10.29□□□□□ -0.76
SMARCB1-206ENST00000477836 TRIM9Q9C026 710 aa10.29□□□□□ -0.76
SMARCB1-206ENST00000477836 PCED1AQ9H1Q7 454 aa10.29□□□□□ -0.76
SMARCB1-206ENST00000477836 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.29□□□□□ -0.76
SMARCB1-206ENST00000477836 PAXBP1Q9Y5B6 917 aa10.29□□□□□ -0.76
SMARCB1-206ENST00000477836 SRPRBQ9Y5M8 271 aaKnown RBP10.29□□□□□ -0.76
SMARCB1-206ENST00000477836 ANKRD17O75179 2603 aaKnown RBP10.29□□□□□ -0.76
SMARCB1-206ENST00000477836 TP53BP1Q12888 1972 aaPredicted RBP10.28□□□□□ -0.76
SMARCB1-206ENST00000477836 VWA3AA6NCI4 1184 aa10.28□□□□□ -0.76
SMARCB1-206ENST00000477836 ENO4A6NNW6 628 aa10.28□□□□□ -0.76
SMARCB1-206ENST00000477836 H0YCG3 227 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms