RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 HNRNPH3P31942 346 aaKnown RBP13.73□□□□□ -0.21
TOP3A-205ENST00000477508 CASP14P31944 242 aa13.73□□□□□ -0.21
TOP3A-205ENST00000477508 NSFP46459 744 aaKnown RBP13.73□□□□□ -0.21
TOP3A-205ENST00000477508 IFNAR2P48551 515 aa13.73□□□□□ -0.21
TOP3A-205ENST00000477508 SLC6A3Q01959 620 aa13.73□□□□□ -0.21
TOP3A-205ENST00000477508 CENPCQ03188 943 aa13.73□□□□□ -0.21
TOP3A-205ENST00000477508 CLEC16AQ2KHT3 1053 aa13.73□□□□□ -0.21
TOP3A-205ENST00000477508 OR6B2Q6IFH4 312 aa13.73□□□□□ -0.21
TOP3A-205ENST00000477508 C1orf228Q6PIY5 440 aa13.73□□□□□ -0.21
TOP3A-205ENST00000477508 TRIM67Q6ZTA4 783 aa13.73□□□□□ -0.21
TOP3A-205ENST00000477508 SLC26A9Q7LBE3 791 aa13.73□□□□□ -0.21
TOP3A-205ENST00000477508 OR8K1Q8NGG5 319 aa13.73□□□□□ -0.21
TOP3A-205ENST00000477508 CSGALNACT1Q8TDX6 532 aa13.73□□□□□ -0.21
TOP3A-205ENST00000477508 OSCP1Q8WVF1 389 aa13.73□□□□□ -0.21
TOP3A-205ENST00000477508 CPA5Q8WXQ8 436 aa13.73□□□□□ -0.21
TOP3A-205ENST00000477508 OTUB2Q96DC9 234 aa13.73□□□□□ -0.21
TOP3A-205ENST00000477508 MSANTD3Q96H12 275 aa13.73□□□□□ -0.21
TOP3A-205ENST00000477508 ZFRQ96KR1 1074 aaKnown RBP13.73□□□□□ -0.21
TOP3A-205ENST00000477508 KLF16Q9BXK1 252 aaPredicted RBP13.73□□□□□ -0.21
TOP3A-205ENST00000477508 DCLK3Q9C098 648 aa13.73□□□□□ -0.21
TOP3A-205ENST00000477508 HAUS4Q9H6D7 363 aa13.73□□□□□ -0.21
TOP3A-205ENST00000477508 GKN1Q9NS71 199 aa13.73□□□□□ -0.21
TOP3A-205ENST00000477508 SEPT11Q9NVA2 429 aaKnown RBP13.73□□□□□ -0.21
TOP3A-205ENST00000477508 SMPD4Q9NXE4 827 aa13.73□□□□□ -0.21
TOP3A-205ENST00000477508 CFAP97Q9P2B7 532 aa13.73□□□□□ -0.21
TOP3A-205ENST00000477508 WDR35Q9P2L0 1181 aa13.73□□□□□ -0.21
TOP3A-205ENST00000477508 FBXL21Q9UKT6 434 aa13.73□□□□□ -0.21
TOP3A-205ENST00000477508 ZNF510Q9Y2H8 683 aa13.73□□□□□ -0.21
TOP3A-205ENST00000477508 HBS1LQ9Y450 684 aaKnown RBP13.73□□□□□ -0.21
TOP3A-205ENST00000477508 ERBB2P04626 1255 aa13.72□□□□□ -0.21
TOP3A-205ENST00000477508 CALB1P05937 261 aa13.72□□□□□ -0.21
TOP3A-205ENST00000477508 GZMAP12544 262 aa13.72□□□□□ -0.21
TOP3A-205ENST00000477508 NCAM1P13591 858 aa13.72□□□□□ -0.21
TOP3A-205ENST00000477508 ZNF75DP51815 510 aa13.72□□□□□ -0.21
TOP3A-205ENST00000477508 AMPD2Q01433 879 aa13.72□□□□□ -0.21
TOP3A-205ENST00000477508 PRKCQQ04759 706 aa13.72□□□□□ -0.21
TOP3A-205ENST00000477508 EFEMP1Q12805 493 aa13.72□□□□□ -0.21
TOP3A-205ENST00000477508 NR1H3Q13133 447 aa13.72□□□□□ -0.21
TOP3A-205ENST00000477508 NNTQ13423 1086 aa13.72□□□□□ -0.21
TOP3A-205ENST00000477508 OLFML1Q6UWY5 402 aa13.72□□□□□ -0.21
TOP3A-205ENST00000477508 FAM183BPQ6ZVS7 135 aa13.72□□□□□ -0.21
TOP3A-205ENST00000477508 HTR3DQ70Z44 454 aa13.72□□□□□ -0.21
TOP3A-205ENST00000477508 ARCQ7LC44 396 aa13.72□□□□□ -0.21
TOP3A-205ENST00000477508 PHF13Q86YI8 300 aaPredicted RBP13.72□□□□□ -0.21
TOP3A-205ENST00000477508 MIB1Q86YT6 1006 aa13.72□□□□□ -0.21
TOP3A-205ENST00000477508 CNGA4Q8IV77 575 aa13.72□□□□□ -0.21
TOP3A-205ENST00000477508 CLEC4CQ8WTT0 213 aa13.72□□□□□ -0.21
TOP3A-205ENST00000477508 EDEM1Q92611 657 aa13.72□□□□□ -0.21
TOP3A-205ENST00000477508 ATP2A3Q93084 1043 aa13.72□□□□□ -0.21
TOP3A-205ENST00000477508 RNF25Q96BH1 459 aaPredicted RBP13.72□□□□□ -0.21
TOP3A-205ENST00000477508 VCPIP1Q96JH7 1222 aa13.72□□□□□ -0.21
TOP3A-205ENST00000477508 PCDHB18PQ96TA0 734 aa13.72□□□□□ -0.21
TOP3A-205ENST00000477508 FAM83CQ9BQN1 747 aa13.72□□□□□ -0.21
TOP3A-205ENST00000477508 SYT11Q9BT88 431 aa13.72□□□□□ -0.21
TOP3A-205ENST00000477508 DUS2Q9NX74 493 aaKnown RBP13.72□□□□□ -0.21
TOP3A-205ENST00000477508 RRN3Q9NYV6 651 aa13.72□□□□□ -0.21
TOP3A-205ENST00000477508 RASAL2Q9UJF2 1139 aa13.72□□□□□ -0.21
TOP3A-205ENST00000477508 ARNTLO00327 626 aa13.71□□□□□ -0.21
TOP3A-205ENST00000477508 AP5Z1O43299 807 aa13.71□□□□□ -0.21
TOP3A-205ENST00000477508 NFATC1O95644 943 aa13.71□□□□□ -0.21
TOP3A-205ENST00000477508 ZXDBP98169 803 aa13.71□□□□□ -0.21
TOP3A-205ENST00000477508 CDK17Q00537 523 aa13.71□□□□□ -0.21
TOP3A-205ENST00000477508 ARID5BQ14865 1188 aa13.71□□□□□ -0.21
TOP3A-205ENST00000477508 ITPRIPL2Q3MIP1 535 aa13.71□□□□□ -0.21
TOP3A-205ENST00000477508 SLC44A4Q53GD3 710 aa13.71□□□□□ -0.21
TOP3A-205ENST00000477508 TDRD12Q587J7 1177 aaKnown RBP13.71□□□□□ -0.21
TOP3A-205ENST00000477508 ACAD10Q6JQN1 1059 aa13.71□□□□□ -0.21
TOP3A-205ENST00000477508 HFE2Q6ZVN8 426 aa13.71□□□□□ -0.21
TOP3A-205ENST00000477508 ZNF571Q7Z3V5 609 aaPredicted RBP13.71□□□□□ -0.21
TOP3A-205ENST00000477508 XYLT1Q86Y38 959 aa13.71□□□□□ -0.21
TOP3A-205ENST00000477508 CPA6Q8N4T0 437 aa13.71□□□□□ -0.21
TOP3A-205ENST00000477508 TTC16Q8NEE8 873 aa13.71□□□□□ -0.21
TOP3A-205ENST00000477508 KHSRPQ92945 711 aaKnown RBP eCLIP13.71□□□□□ -0.21
TOP3A-205ENST00000477508 EXOC4Q96A65 974 aa13.71□□□□□ -0.21
TOP3A-205ENST00000477508 PLD4Q96BZ4 506 aa13.71□□□□□ -0.21
TOP3A-205ENST00000477508 SERPINB11Q96P15 392 aa13.71□□□□□ -0.21
TOP3A-205ENST00000477508 DNAJC7Q99615 494 aa13.71□□□□□ -0.21
TOP3A-205ENST00000477508 C1QTNF1Q9BXJ1 281 aa13.71□□□□□ -0.21
TOP3A-205ENST00000477508 SMOC2Q9H3U7 446 aa13.71□□□□□ -0.21
TOP3A-205ENST00000477508 C8orf33Q9H7E9 229 aaPredicted RBP13.71□□□□□ -0.21
TOP3A-205ENST00000477508 ADAM22Q9P0K1 906 aa13.71□□□□□ -0.21
TOP3A-205ENST00000477508 NUDT5Q9UKK9 219 aa13.71□□□□□ -0.21
TOP3A-205ENST00000477508 TRIOO75962 3097 aa13.7□□□□□ -0.22
TOP3A-205ENST00000477508 SLC12A8A0AV02 714 aa13.7□□□□□ -0.22
TOP3A-205ENST00000477508 AKR1B15C9JRZ8 316 aaPredicted RBP13.7□□□□□ -0.22
TOP3A-205ENST00000477508 MAN2B1O00754 1011 aa13.7□□□□□ -0.22
TOP3A-205ENST00000477508 MDM4O15151 490 aa13.7□□□□□ -0.22
TOP3A-205ENST00000477508 STC2O76061 302 aa13.7□□□□□ -0.22
TOP3A-205ENST00000477508 FYNP06241 537 aa13.7□□□□□ -0.22
TOP3A-205ENST00000477508 GBP1P32455 592 aa13.7□□□□□ -0.22
TOP3A-205ENST00000477508 NOS2P35228 1153 aa13.7□□□□□ -0.22
TOP3A-205ENST00000477508 HARS2P49590 506 aaKnown RBP13.7□□□□□ -0.22
TOP3A-205ENST00000477508 GSCP56915 257 aaPredicted RBP13.7□□□□□ -0.22
TOP3A-205ENST00000477508 RING1Q06587 406 aa13.7□□□□□ -0.22
TOP3A-205ENST00000477508 TBX2Q13207 712 aaPredicted RBP13.7□□□□□ -0.22
TOP3A-205ENST00000477508 MTA1Q13330 715 aa13.7□□□□□ -0.22
TOP3A-205ENST00000477508 RUNX3Q13761 415 aa13.7□□□□□ -0.22
TOP3A-205ENST00000477508 TRIP4Q15650 581 aaPredicted RBP13.7□□□□□ -0.22
TOP3A-205ENST00000477508 DCAF6Q58WW2 860 aa13.7□□□□□ -0.22
TOP3A-205ENST00000477508 FAM102AQ5T9C2 384 aaPredicted RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms