RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 NACA2Q9H009 215 aa16.73■□□□□ 0.27
GPC1-207ENST00000466624 TDP1Q9NUW8 608 aa16.73■□□□□ 0.27
GPC1-207ENST00000466624 TMEM51Q9NW97 253 aa16.73■□□□□ 0.27
GPC1-207ENST00000466624 DNMT3LQ9UJW3 386 aa16.73■□□□□ 0.27
GPC1-207ENST00000466624 SCINQ9Y6U3 715 aa16.73■□□□□ 0.27
GPC1-207ENST00000466624 C19orf67A6NJJ6 358 aa16.72■□□□□ 0.27
GPC1-207ENST00000466624 SIGLEC16A6NMB1 481 aa16.72■□□□□ 0.27
GPC1-207ENST00000466624 EIF3CLB5ME19 914 aaKnown RBP16.72■□□□□ 0.27
GPC1-207ENST00000466624 GOLGA8SH3BPF8 625 aa16.72■□□□□ 0.27
GPC1-207ENST00000466624 ECI2O75521 394 aa16.72■□□□□ 0.27
GPC1-207ENST00000466624 MBL2P11226 248 aaPredicted RBP16.72■□□□□ 0.27
GPC1-207ENST00000466624 NOS2P35228 1153 aa16.72■□□□□ 0.27
GPC1-207ENST00000466624 MATKP42679 507 aa16.72■□□□□ 0.27
GPC1-207ENST00000466624 NNTQ13423 1086 aa16.72■□□□□ 0.27
GPC1-207ENST00000466624 PPP1R15BQ5SWA1 713 aa16.72■□□□□ 0.27
GPC1-207ENST00000466624 DNAJC24Q6P3W2 148 aa16.72■□□□□ 0.27
GPC1-207ENST00000466624 DEFB106AQ8N104 65 aa16.72■□□□□ 0.27
GPC1-207ENST00000466624 CELF5Q8N6W0 485 aaKnown RBP16.72■□□□□ 0.27
GPC1-207ENST00000466624 EDEM1Q92611 657 aa16.72■□□□□ 0.27
GPC1-207ENST00000466624 USP13Q92995 863 aaPredicted RBP16.72■□□□□ 0.27
GPC1-207ENST00000466624 ELSPBP1Q96BH3 223 aa16.72■□□□□ 0.27
GPC1-207ENST00000466624 ZNF653Q96CK0 615 aa16.72■□□□□ 0.27
GPC1-207ENST00000466624 ZFRQ96KR1 1074 aaKnown RBP16.72■□□□□ 0.27
GPC1-207ENST00000466624 EIF3CQ99613 913 aaKnown RBP16.72■□□□□ 0.27
GPC1-207ENST00000466624 SELENOOQ9BVL4 669 aa16.72■□□□□ 0.27
GPC1-207ENST00000466624 SMOC2Q9H3U7 446 aa16.72■□□□□ 0.27
GPC1-207ENST00000466624 ZFP14Q9HCL3 533 aa16.72■□□□□ 0.27
GPC1-207ENST00000466624 METTL5Q9NRN9 209 aaKnown RBP16.72■□□□□ 0.27
GPC1-207ENST00000466624 SPTLC3Q9NUV7 552 aa16.72■□□□□ 0.27
GPC1-207ENST00000466624 PARVAQ9NVD7 372 aa16.72■□□□□ 0.27
GPC1-207ENST00000466624 IGSF9Q9P2J2 1179 aa16.72■□□□□ 0.27
GPC1-207ENST00000466624 CNOT8Q9UFF9 292 aaKnown RBP16.72■□□□□ 0.27
GPC1-207ENST00000466624 INTUQ9ULD6 942 aa16.72■□□□□ 0.27
GPC1-207ENST00000466624 FAM170AA1A519 330 aa16.71■□□□□ 0.27
GPC1-207ENST00000466624 SOWAHDA6NJG2 315 aa16.71■□□□□ 0.27
GPC1-207ENST00000466624 NDUFA10O95299 355 aa16.71■□□□□ 0.27
GPC1-207ENST00000466624 PRAMEF12O95522 483 aa16.71■□□□□ 0.27
GPC1-207ENST00000466624 TBX18O95935 607 aa16.71■□□□□ 0.27
GPC1-207ENST00000466624 KRT3P12035 628 aa16.71■□□□□ 0.27
GPC1-207ENST00000466624 KPNA1P52294 538 aaPredicted RBP16.71■□□□□ 0.27
GPC1-207ENST00000466624 GPC5P78333 572 aa16.71■□□□□ 0.27
GPC1-207ENST00000466624 COG7P83436 770 aa16.71■□□□□ 0.27
GPC1-207ENST00000466624 USP4Q13107 963 aa16.71■□□□□ 0.27
GPC1-207ENST00000466624 HTR4Q13639 388 aa16.71■□□□□ 0.27
GPC1-207ENST00000466624 TJAP1Q5JTD0 557 aa16.71■□□□□ 0.27
GPC1-207ENST00000466624 SYPL2Q5VXT5 272 aa16.71■□□□□ 0.27
GPC1-207ENST00000466624 LRRC8AQ8IWT6 810 aa16.71■□□□□ 0.27
GPC1-207ENST00000466624 DQX1Q8TE96 717 aaKnown RBP16.71■□□□□ 0.27
GPC1-207ENST00000466624 NT5C3BQ969T7 300 aa16.71■□□□□ 0.27
GPC1-207ENST00000466624 SERPINB11Q96P15 392 aa16.71■□□□□ 0.27
GPC1-207ENST00000466624 DDX23Q9BUQ8 820 aaKnown RBP16.71■□□□□ 0.27
GPC1-207ENST00000466624 KLF16Q9BXK1 252 aaPredicted RBP16.71■□□□□ 0.27
GPC1-207ENST00000466624 MRPL47Q9HD33 250 aaKnown RBP16.71■□□□□ 0.27
GPC1-207ENST00000466624 LUC7LQ9NQ29 371 aaKnown RBP16.71■□□□□ 0.27
GPC1-207ENST00000466624 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.71■□□□□ 0.27
GPC1-207ENST00000466624 MARCH2Q9P0N8 246 aa16.71■□□□□ 0.27
GPC1-207ENST00000466624 RASAL2Q9UJF2 1139 aa16.71■□□□□ 0.27
GPC1-207ENST00000466624 NUDT5Q9UKK9 219 aa16.71■□□□□ 0.27
GPC1-207ENST00000466624 STAP1Q9ULZ2 295 aa16.71■□□□□ 0.27
GPC1-207ENST00000466624 NAALADL1Q9UQQ1 740 aa16.71■□□□□ 0.27
GPC1-207ENST00000466624 HBS1LQ9Y450 684 aaKnown RBP16.71■□□□□ 0.27
GPC1-207ENST00000466624 CPQQ9Y646 472 aa16.71■□□□□ 0.27
GPC1-207ENST00000466624 EPN1Q9Y6I3 576 aaPredicted RBP16.71■□□□□ 0.27
GPC1-207ENST00000466624 MYO10Q9HD67 2058 aa16.7■□□□□ 0.26
GPC1-207ENST00000466624 DPYSL4O14531 572 aa16.7■□□□□ 0.26
GPC1-207ENST00000466624 ZNF263O14978 683 aa16.7■□□□□ 0.26
GPC1-207ENST00000466624 GRAP2O75791 330 aa16.7■□□□□ 0.26
GPC1-207ENST00000466624 IGLV3-25P01717 112 aa16.7■□□□□ 0.26
GPC1-207ENST00000466624 CYP1A2P05177 515 aa16.7■□□□□ 0.26
GPC1-207ENST00000466624 H2AFZP0C0S5 128 aa16.7■□□□□ 0.26
GPC1-207ENST00000466624 TMEM253P0C7T8 217 aa16.7■□□□□ 0.26
GPC1-207ENST00000466624 SP100P23497 879 aaPredicted RBP16.7■□□□□ 0.26
GPC1-207ENST00000466624 FLT3P36888 993 aa16.7■□□□□ 0.26
GPC1-207ENST00000466624 GALCP54803 685 aa16.7■□□□□ 0.26
GPC1-207ENST00000466624 EFEMP1Q12805 493 aa16.7■□□□□ 0.26
GPC1-207ENST00000466624 MAMLD1Q13495 774 aa16.7■□□□□ 0.26
GPC1-207ENST00000466624 ZNF77Q15935 545 aa16.7■□□□□ 0.26
GPC1-207ENST00000466624 DCAF6Q58WW2 860 aa16.7■□□□□ 0.26
GPC1-207ENST00000466624 PARM1Q6UWI2 310 aa16.7■□□□□ 0.26
GPC1-207ENST00000466624 H2AFVQ71UI9 128 aa16.7■□□□□ 0.26
GPC1-207ENST00000466624 DEPDC1BQ8WUY9 529 aa16.7■□□□□ 0.26
GPC1-207ENST00000466624 CTNNBL1Q8WYA6 563 aaPredicted RBP16.7■□□□□ 0.26
GPC1-207ENST00000466624 FGF14Q92915 247 aa16.7■□□□□ 0.26
GPC1-207ENST00000466624 PGAP3Q96FM1 320 aaPredicted RBP16.7■□□□□ 0.26
GPC1-207ENST00000466624 THAP2Q9H0W7 228 aa16.7■□□□□ 0.26
GPC1-207ENST00000466624 CCL26Q9Y258 94 aa16.7■□□□□ 0.26
GPC1-207ENST00000466624 C2CD4BA6NLJ0 364 aa16.69■□□□□ 0.26
GPC1-207ENST00000466624 LEFTY2O00292 366 aa16.69■□□□□ 0.26
GPC1-207ENST00000466624 MDM4O15151 490 aa16.69■□□□□ 0.26
GPC1-207ENST00000466624 NRDCO43847 1150 aa16.69■□□□□ 0.26
GPC1-207ENST00000466624 IPO7O95373 1038 aaKnown RBP16.69■□□□□ 0.26
GPC1-207ENST00000466624 ABCB4P21439 1286 aa16.69■□□□□ 0.26
GPC1-207ENST00000466624 PTPN9P43378 593 aa16.69■□□□□ 0.26
GPC1-207ENST00000466624 ZXDBP98169 803 aa16.69■□□□□ 0.26
GPC1-207ENST00000466624 RING1Q06587 406 aa16.69■□□□□ 0.26
GPC1-207ENST00000466624 EIF4EBP2Q13542 120 aaPredicted RBP16.69■□□□□ 0.26
GPC1-207ENST00000466624 SPA17Q15506 151 aa16.69■□□□□ 0.26
GPC1-207ENST00000466624 TRIP4Q15650 581 aaPredicted RBP16.69■□□□□ 0.26
GPC1-207ENST00000466624 SLC25A52Q3SY17 297 aa16.69■□□□□ 0.26
GPC1-207ENST00000466624 TANGO2Q6ICL3 276 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms