RNA–Protein interactions for RNA: ENST00000463428.5

PHACTR4-203, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 1,421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-203ENST00000463428 CLUL1Q15846 466 aa14.51□□□□□ -0.09
PHACTR4-203ENST00000463428 CCDC14Q49A88 953 aa14.51□□□□□ -0.09
PHACTR4-203ENST00000463428 DCAF6Q58WW2 860 aa14.51□□□□□ -0.09
PHACTR4-203ENST00000463428 HECTD3Q5T447 861 aa14.51□□□□□ -0.09
PHACTR4-203ENST00000463428 STXBP5Q5T5C0 1151 aa14.51□□□□□ -0.09
PHACTR4-203ENST00000463428 OTUD1Q5VV17 481 aaPredicted RBP14.51□□□□□ -0.09
PHACTR4-203ENST00000463428 KLHDC10Q6PID8 442 aa14.51□□□□□ -0.09
PHACTR4-203ENST00000463428 REXO1L1PQ8IX06 675 aa14.51□□□□□ -0.09
PHACTR4-203ENST00000463428 ZNF564Q8TBZ8 553 aaPredicted RBP14.51□□□□□ -0.09
PHACTR4-203ENST00000463428 FNIP1Q8TF40 1166 aa14.51□□□□□ -0.09
PHACTR4-203ENST00000463428 GOLGA1Q92805 767 aa14.51□□□□□ -0.09
PHACTR4-203ENST00000463428 GCNAQ96QF7 691 aa14.51□□□□□ -0.09
PHACTR4-203ENST00000463428 SLC22A12Q96S37 553 aa14.51□□□□□ -0.09
PHACTR4-203ENST00000463428 NPY6RQ99463 290 aa14.51□□□□□ -0.09
PHACTR4-203ENST00000463428 TRIM62Q9BVG3 475 aa14.51□□□□□ -0.09
PHACTR4-203ENST00000463428 CALCOCO1Q9P1Z2 691 aa14.51□□□□□ -0.09
PHACTR4-203ENST00000463428 CTTNBP2NLQ9P2B4 639 aa14.51□□□□□ -0.09
PHACTR4-203ENST00000463428 MRPS23Q9Y3D9 190 aaKnown RBP14.51□□□□□ -0.09
PHACTR4-203ENST00000463428 COCHO43405 550 aa14.5□□□□□ -0.09
PHACTR4-203ENST00000463428 ENDOD1O94919 500 aa14.5□□□□□ -0.09
PHACTR4-203ENST00000463428 IGLV3-25P01717 112 aa14.5□□□□□ -0.09
PHACTR4-203ENST00000463428 PDGFRAP16234 1089 aa14.5□□□□□ -0.09
PHACTR4-203ENST00000463428 PFKLP17858 780 aa14.5□□□□□ -0.09
PHACTR4-203ENST00000463428 TFE3P19532 575 aaPredicted RBP14.5□□□□□ -0.09
PHACTR4-203ENST00000463428 GPD1P21695 349 aa14.5□□□□□ -0.09
PHACTR4-203ENST00000463428 KCNA5P22460 613 aa14.5□□□□□ -0.09
PHACTR4-203ENST00000463428 FSHRP23945 695 aa14.5□□□□□ -0.09
PHACTR4-203ENST00000463428 DDX6P26196 483 aaKnown RBP eCLIP14.5□□□□□ -0.09
PHACTR4-203ENST00000463428 MTHFRP42898 656 aa14.5□□□□□ -0.09
PHACTR4-203ENST00000463428 PTPN9P43378 593 aa14.5□□□□□ -0.09
PHACTR4-203ENST00000463428 KIF5AQ12840 1032 aa14.5□□□□□ -0.09
PHACTR4-203ENST00000463428 SKIV2LQ15477 1246 aaKnown RBP14.5□□□□□ -0.09
PHACTR4-203ENST00000463428 DCUN1D2Q6PH85 259 aa14.5□□□□□ -0.09
PHACTR4-203ENST00000463428 DQX1Q8TE96 717 aaKnown RBP14.5□□□□□ -0.09
PHACTR4-203ENST00000463428 CENPIQ92674 756 aaPredicted RBP14.5□□□□□ -0.09
PHACTR4-203ENST00000463428 HLA-CQ95604 372 aa14.5□□□□□ -0.09
PHACTR4-203ENST00000463428 BTBD6Q96KE9 485 aa14.5□□□□□ -0.09
PHACTR4-203ENST00000463428 RIPOR3Q96MK2 946 aa14.5□□□□□ -0.09
PHACTR4-203ENST00000463428 CFAP57Q96MR6 1250 aa14.5□□□□□ -0.09
PHACTR4-203ENST00000463428 CYP2S1Q96SQ9 504 aa14.5□□□□□ -0.09
PHACTR4-203ENST00000463428 POMKQ9H5K3 350 aa14.5□□□□□ -0.09
PHACTR4-203ENST00000463428 TASP1Q9H6P5 420 aa14.5□□□□□ -0.09
PHACTR4-203ENST00000463428 OLA1Q9NTK5 396 aaKnown RBP14.5□□□□□ -0.09
PHACTR4-203ENST00000463428 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.5□□□□□ -0.09
PHACTR4-203ENST00000463428 USP15Q9Y4E8 981 aaPredicted RBP14.5□□□□□ -0.09
PHACTR4-203ENST00000463428 HELZP42694 1942 aaKnown RBP14.5□□□□□ -0.09
PHACTR4-203ENST00000463428 CAPN9O14815 690 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 MDM4O15151 490 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 MBTPS2O43462 519 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 HDCP19113 662 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 ATP5C1P36542 298 aaKnown RBP14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 ZNF143P52747 638 aaPredicted RBP14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 SLC25A52Q3SY17 297 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 RAB6CQ53S08 254 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 GPR158Q5T848 1215 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 NPAS3Q8IXF0 933 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 TXLNBQ8N3L3 684 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 ARFGAP1Q8N6T3 406 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 ARL14EPQ8N8R7 260 aaPredicted RBP14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 MAB21L3Q8N8X9 362 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 MAFAQ8NHW3 353 aaPredicted RBP14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 KIAA1524Q8TCG1 905 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 RNF139Q8WU17 664 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 ING5Q8WYH8 240 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 PGAP3Q96FM1 320 aaPredicted RBP14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 ZSWIM3Q96MP5 696 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 CDK5RAP1Q96SZ6 601 aaKnown RBP14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 TBCBQ99426 244 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 CNPY3Q9BT09 278 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 RAB6CQ9H0N0 254 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 SMOC2Q9H3U7 446 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 KCND1Q9NSA2 647 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 RRN3Q9NYV6 651 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 SFMBT1Q9UHJ3 866 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 ANAPC7Q9UJX3 599 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 NUP210Q8TEM1 1887 aaPredicted RBP14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 USP27XA6NNY8 438 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 CCP110O43303 1012 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 TRUB2O95900 331 aaKnown RBP14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 WEE1P30291 646 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 SLC7A9P82251 487 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 ZXDBP98169 803 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 SMAD4Q13485 552 aaKnown RBP14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 CBX2Q14781 532 aaPredicted RBP14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 C15orf59Q2T9L4 293 aaPredicted RBP14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 LEXMQ3ZCV2 418 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 ARHGAP15Q53QZ3 475 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 C10orf120Q5SQS8 335 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 SH3PXD2AQ5TCZ1 1133 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 TAC4Q86UU9 113 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 NIPA2Q8N8Q9 360 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 TPCN2Q8NHX9 752 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 FGF13Q92913 245 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 ZFRQ96KR1 1074 aaKnown RBP14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 NECTIN4Q96NY8 510 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 KLF16Q9BXK1 252 aaPredicted RBP14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 TRPC7Q9HCX4 862 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 ZMYM5Q9UJ78 669 aa14.49□□□□□ -0.09
PHACTR4-203ENST00000463428 STAP1Q9ULZ2 295 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms