RNA–Protein interactions for RNA: ENST00000462730.5

HDAC6-213, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-213ENST00000462730 UBAP2Q5T6F2 1119 aaKnown RBP15.08■□□□□ 0
HDAC6-213ENST00000462730 NPNTQ6UXI9 565 aa15.08■□□□□ 0
HDAC6-213ENST00000462730 SUGP1Q8IWZ8 645 aaKnown RBP15.08■□□□□ 0
HDAC6-213ENST00000462730 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.08■□□□□ 0
HDAC6-213ENST00000462730 MYLPFQ96A32 169 aa15.08■□□□□ 0
HDAC6-213ENST00000462730 ATP6V1G3Q96LB4 118 aa15.08■□□□□ 0
HDAC6-213ENST00000462730 C10orf88Q9H8K7 445 aa15.08■□□□□ 0
HDAC6-213ENST00000462730 PCDH9Q9HC56 1237 aa15.08■□□□□ 0
HDAC6-213ENST00000462730 DNAJC17Q9NVM6 304 aaKnown RBP15.08■□□□□ 0
HDAC6-213ENST00000462730 TMEM189-UBE2V1I3L0A0 370 aa15.07■□□□□ 0
HDAC6-213ENST00000462730 DNALI1O14645 258 aaPredicted RBP15.07■□□□□ 0
HDAC6-213ENST00000462730 MCF2LO15068 1137 aa15.07■□□□□ 0
HDAC6-213ENST00000462730 IFNB1P01574 187 aa15.07■□□□□ 0
HDAC6-213ENST00000462730 NUDT17P0C025 328 aa15.07■□□□□ 0
HDAC6-213ENST00000462730 CACNA2D1P54289 1103 aa15.07■□□□□ 0
HDAC6-213ENST00000462730 EIF3BP55884 814 aaKnown RBP15.07■□□□□ 0
HDAC6-213ENST00000462730 GPS1Q13098 491 aa15.07■□□□□ 0
HDAC6-213ENST00000462730 PKN2Q16513 984 aaKnown RBP15.07■□□□□ 0
HDAC6-213ENST00000462730 ERMARDQ5T6L9 678 aa15.07■□□□□ 0
HDAC6-213ENST00000462730 TTC19Q6DKK2 380 aaPredicted RBP15.07■□□□□ 0
HDAC6-213ENST00000462730 OVOS1Q6IE37 1185 aa15.07■□□□□ 0
HDAC6-213ENST00000462730 ANKLE1Q8NAG6 615 aa15.07■□□□□ 0
HDAC6-213ENST00000462730 ZMIZ2Q8NF64 920 aa15.07■□□□□ 0
HDAC6-213ENST00000462730 CASD1Q96PB1 797 aa15.07■□□□□ 0
HDAC6-213ENST00000462730 RNF157Q96PX1 679 aa15.07■□□□□ 0
HDAC6-213ENST00000462730 RHOBTB2Q9BYZ6 727 aa15.07■□□□□ 0
HDAC6-213ENST00000462730 ULBP1Q9BZM6 244 aa15.07■□□□□ 0
HDAC6-213ENST00000462730 FAM169AQ9Y6X4 670 aa15.07■□□□□ 0
HDAC6-213ENST00000462730 HMGB1P1B2RPK0 211 aaPredicted RBP15.07■□□□□ 0
HDAC6-213ENST00000462730 FBXO21O94952 628 aa15.07■□□□□ 0
HDAC6-213ENST00000462730 SHBGP04278 402 aa15.07■□□□□ 0
HDAC6-213ENST00000462730 YWHAZP63104 245 aaKnown RBP15.07■□□□□ 0
HDAC6-213ENST00000462730 KRT71Q3SY84 523 aa15.07■□□□□ 0
HDAC6-213ENST00000462730 ANKRD20A8PQ5CZ79 823 aa15.07■□□□□ 0
HDAC6-213ENST00000462730 INTS6LQ5JSJ4 861 aaKnown RBP15.07■□□□□ 0
HDAC6-213ENST00000462730 HIBCHQ6NVY1 386 aaPredicted RBP15.07■□□□□ 0
HDAC6-213ENST00000462730 C1orf228Q6PIY5 440 aa15.07■□□□□ 0
HDAC6-213ENST00000462730 FAM43BQ6ZT52 329 aaPredicted RBP15.07■□□□□ 0
HDAC6-213ENST00000462730 STRADAQ7RTN6 431 aa15.07■□□□□ 0
HDAC6-213ENST00000462730 GPRIN1Q7Z2K8 1008 aa15.07■□□□□ 0
HDAC6-213ENST00000462730 CRIPAKQ8N1N5 446 aa15.07■□□□□ 0
HDAC6-213ENST00000462730 OR10T2Q8NGX3 314 aa15.07■□□□□ 0
HDAC6-213ENST00000462730 RSAD2Q8WXG1 361 aa15.07■□□□□ 0
HDAC6-213ENST00000462730 SMARCD1Q96GM5 515 aa15.07■□□□□ 0
HDAC6-213ENST00000462730 PAWRQ96IZ0 340 aaKnown RBP15.07■□□□□ 0
HDAC6-213ENST00000462730 PWWP2AQ96N64 755 aa15.07■□□□□ 0
HDAC6-213ENST00000462730 ACBD6Q9BR61 282 aa15.07■□□□□ 0
HDAC6-213ENST00000462730 RABEP2Q9H5N1 569 aa15.07■□□□□ 0
HDAC6-213ENST00000462730 C11orf49Q9H6J7 331 aa15.07■□□□□ 0
HDAC6-213ENST00000462730 TMEM39AQ9NV64 488 aa15.07■□□□□ 0
HDAC6-213ENST00000462730 TMEM30AQ9NV96 361 aa15.07■□□□□ 0
HDAC6-213ENST00000462730 ARHGEF37A1IGU5 675 aa15.06■□□□□ 0
HDAC6-213ENST00000462730 APOL1O14791 398 aa15.06■□□□□ 0
HDAC6-213ENST00000462730 RIPK2O43353 540 aa15.06■□□□□ 0
HDAC6-213ENST00000462730 CLTBP09497 229 aa15.06■□□□□ 0
HDAC6-213ENST00000462730 TYMPP19971 482 aa15.06■□□□□ 0
HDAC6-213ENST00000462730 IL4RP24394 825 aa15.06■□□□□ 0
HDAC6-213ENST00000462730 GDF10P55107 478 aa15.06■□□□□ 0
HDAC6-213ENST00000462730 SLC29A2Q14542 456 aa15.06■□□□□ 0
HDAC6-213ENST00000462730 NOMO1Q15155 1222 aa15.06■□□□□ 0
HDAC6-213ENST00000462730 LRRC26Q2I0M4 334 aa15.06■□□□□ 0
HDAC6-213ENST00000462730 SLC25A52Q3SY17 297 aa15.06■□□□□ 0
HDAC6-213ENST00000462730 DCAF6Q58WW2 860 aa15.06■□□□□ 0
HDAC6-213ENST00000462730 PPP6R3Q5H9R7 873 aaPredicted RBP15.06■□□□□ 0
HDAC6-213ENST00000462730 HFE2Q6ZVN8 426 aa15.06■□□□□ 0
HDAC6-213ENST00000462730 TRMT10CQ7L0Y3 403 aaKnown RBP15.06■□□□□ 0
HDAC6-213ENST00000462730 NPAS4Q8IUM7 802 aa15.06■□□□□ 0
HDAC6-213ENST00000462730 CCDC185Q8N715 623 aa15.06■□□□□ 0
HDAC6-213ENST00000462730 UHMK1Q8TAS1 419 aaKnown RBP15.06■□□□□ 0
HDAC6-213ENST00000462730 SLC2A13Q96QE2 648 aa15.06■□□□□ 0
HDAC6-213ENST00000462730 KCNK16Q96T55 309 aa15.06■□□□□ 0
HDAC6-213ENST00000462730 ZNF670Q9BS34 389 aa15.06■□□□□ 0
HDAC6-213ENST00000462730 ADAM7Q9H2U9 754 aa15.06■□□□□ 0
HDAC6-213ENST00000462730 CDC42EP4Q9H3Q1 356 aaKnown RBP15.06■□□□□ 0
HDAC6-213ENST00000462730 DHX35Q9H5Z1 703 aaKnown RBP15.06■□□□□ 0
HDAC6-213ENST00000462730 NRDE2Q9H7Z3 1164 aa15.06■□□□□ 0
HDAC6-213ENST00000462730 LRRC4CQ9HCJ2 640 aa15.06■□□□□ 0
HDAC6-213ENST00000462730 HCSTQ9UBK5 93 aa15.06■□□□□ 0
HDAC6-213ENST00000462730 PCDHB8Q9UN66 801 aa15.06■□□□□ 0
HDAC6-213ENST00000462730 AP4E1Q9UPM8 1137 aa15.06■□□□□ 0
HDAC6-213ENST00000462730 ATXN2Q99700 1313 aaKnown RBP15.06■□□□□ 0
HDAC6-213ENST00000462730 FNDC1Q4ZHG4 1894 aaPredicted RBP15.06■□□□□ 0
HDAC6-213ENST00000462730 NRP1O14786 923 aa15.05■□□□□ 0
HDAC6-213ENST00000462730 L1CAMP32004 1257 aa15.05■□□□□ 0
HDAC6-213ENST00000462730 DAOAP59103 153 aa15.05■□□□□ 0
HDAC6-213ENST00000462730 ROR1Q01973 937 aa15.05■□□□□ 0
HDAC6-213ENST00000462730 YWHAHQ04917 246 aaPredicted RBP15.05■□□□□ 0
HDAC6-213ENST00000462730 OTUD1Q5VV17 481 aaPredicted RBP15.05■□□□□ 0
HDAC6-213ENST00000462730 FAM171BQ6P995 826 aa15.05■□□□□ 0
HDAC6-213ENST00000462730 VSIG1Q86XK7 387 aa15.05■□□□□ 0
HDAC6-213ENST00000462730 UNC45BQ8IWX7 931 aa15.05■□□□□ 0
HDAC6-213ENST00000462730 THEM5Q8N1Q8 247 aa15.05■□□□□ 0
HDAC6-213ENST00000462730 PQLC3Q8N755 202 aa15.05■□□□□ 0
HDAC6-213ENST00000462730 PCDH19Q8TAB3 1148 aa15.05■□□□□ 0
HDAC6-213ENST00000462730 P3H4Q92791 437 aa15.05■□□□□ 0
HDAC6-213ENST00000462730 KCTD15Q96SI1 283 aaPredicted RBP15.05■□□□□ 0
HDAC6-213ENST00000462730 TMEM209Q96SK2 561 aa15.05■□□□□ 0
HDAC6-213ENST00000462730 TMLHEQ9NVH6 421 aa15.05■□□□□ 0
HDAC6-213ENST00000462730 TPX2Q9ULW0 747 aaKnown RBP15.05■□□□□ 0
HDAC6-213ENST00000462730 NLRC5Q86WI3 1866 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms