RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 CNGA4Q8IV77 575 aa12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 OSCP1Q8WVF1 389 aa12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 CPA5Q8WXQ8 436 aa12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 EDEM1Q92611 657 aa12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 KHSRPQ92945 711 aaKnown RBP eCLIP12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 KLF16Q9BXK1 252 aaPredicted RBP12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 MARCH2Q9P0N8 246 aa12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 CFAP97Q9P2B7 532 aa12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 WNT16Q9UBV4 365 aa12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 TJP2Q9UDY2 1190 aa12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 RASAL2Q9UJF2 1139 aa12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 NUDT5Q9UKK9 219 aa12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 SH3BP1Q9Y3L3 701 aa12.2□□□□□ -0.46
TRAF3IP1-204ENST00000462122 E2F8A0AVK6 867 aa12.19□□□□□ -0.46
TRAF3IP1-204ENST00000462122 ARNTLO00327 626 aa12.19□□□□□ -0.46
TRAF3IP1-204ENST00000462122 MFAP3LO75121 409 aa12.19□□□□□ -0.46
TRAF3IP1-204ENST00000462122 CALB1P05937 261 aa12.19□□□□□ -0.46
TRAF3IP1-204ENST00000462122 IFNAR2P48551 515 aa12.19□□□□□ -0.46
TRAF3IP1-204ENST00000462122 KPNA1P52294 538 aaPredicted RBP12.19□□□□□ -0.46
TRAF3IP1-204ENST00000462122 SLC6A3Q01959 620 aa12.19□□□□□ -0.46
TRAF3IP1-204ENST00000462122 TSR1Q2NL82 804 aaKnown RBP12.19□□□□□ -0.46
TRAF3IP1-204ENST00000462122 HGSNATQ68CP4 663 aa12.19□□□□□ -0.46
TRAF3IP1-204ENST00000462122 TRIM67Q6ZTA4 783 aa12.19□□□□□ -0.46
TRAF3IP1-204ENST00000462122 ZNF571Q7Z3V5 609 aaPredicted RBP12.19□□□□□ -0.46
TRAF3IP1-204ENST00000462122 TMC6Q7Z403 805 aa12.19□□□□□ -0.46
TRAF3IP1-204ENST00000462122 XYLT1Q86Y38 959 aa12.19□□□□□ -0.46
TRAF3IP1-204ENST00000462122 PHF13Q86YI8 300 aaPredicted RBP12.19□□□□□ -0.46
TRAF3IP1-204ENST00000462122 MIB1Q86YT6 1006 aa12.19□□□□□ -0.46
TRAF3IP1-204ENST00000462122 DRC7Q8IY82 874 aa12.19□□□□□ -0.46
TRAF3IP1-204ENST00000462122 TTC16Q8NEE8 873 aa12.19□□□□□ -0.46
TRAF3IP1-204ENST00000462122 OR8K1Q8NGG5 319 aa12.19□□□□□ -0.46
TRAF3IP1-204ENST00000462122 RIN3Q8TB24 985 aa12.19□□□□□ -0.46
TRAF3IP1-204ENST00000462122 CSGALNACT1Q8TDX6 532 aa12.19□□□□□ -0.46
TRAF3IP1-204ENST00000462122 OTUB2Q96DC9 234 aa12.19□□□□□ -0.46
TRAF3IP1-204ENST00000462122 SERPINB11Q96P15 392 aa12.19□□□□□ -0.46
TRAF3IP1-204ENST00000462122 PCDHB18PQ96TA0 734 aa12.19□□□□□ -0.46
TRAF3IP1-204ENST00000462122 DNAJC7Q99615 494 aa12.19□□□□□ -0.46
TRAF3IP1-204ENST00000462122 FAM83CQ9BQN1 747 aa12.19□□□□□ -0.46
TRAF3IP1-204ENST00000462122 SMOC2Q9H3U7 446 aa12.19□□□□□ -0.46
TRAF3IP1-204ENST00000462122 ZNHIT6Q9NWK9 470 aaKnown RBP12.19□□□□□ -0.46
TRAF3IP1-204ENST00000462122 WDR35Q9P2L0 1181 aa12.19□□□□□ -0.46
TRAF3IP1-204ENST00000462122 TBC1D14Q9P2M4 693 aa12.19□□□□□ -0.46
TRAF3IP1-204ENST00000462122 LSM7Q9UK45 103 aaKnown RBP12.19□□□□□ -0.46
TRAF3IP1-204ENST00000462122 FBXL21Q9UKT6 434 aa12.19□□□□□ -0.46
TRAF3IP1-204ENST00000462122 HBS1LQ9Y450 684 aaKnown RBP12.19□□□□□ -0.46
TRAF3IP1-204ENST00000462122 SLC12A8A0AV02 714 aa12.18□□□□□ -0.46
TRAF3IP1-204ENST00000462122 MDM4O15151 490 aa12.18□□□□□ -0.46
TRAF3IP1-204ENST00000462122 DAB1O75553 588 aa12.18□□□□□ -0.46
TRAF3IP1-204ENST00000462122 NFATC1O95644 943 aa12.18□□□□□ -0.46
TRAF3IP1-204ENST00000462122 GZMAP12544 262 aa12.18□□□□□ -0.46
TRAF3IP1-204ENST00000462122 MLLT6P55198 1093 aaPredicted RBP12.18□□□□□ -0.46
TRAF3IP1-204ENST00000462122 GSCP56915 257 aaPredicted RBP12.18□□□□□ -0.46
TRAF3IP1-204ENST00000462122 TBX2Q13207 712 aaPredicted RBP12.18□□□□□ -0.46
TRAF3IP1-204ENST00000462122 NNTQ13423 1086 aa12.18□□□□□ -0.46
TRAF3IP1-204ENST00000462122 FAM102AQ5T9C2 384 aaPredicted RBP12.18□□□□□ -0.46
TRAF3IP1-204ENST00000462122 ACAD10Q6JQN1 1059 aa12.18□□□□□ -0.46
TRAF3IP1-204ENST00000462122 MMS22LQ6ZRQ5 1243 aa12.18□□□□□ -0.46
TRAF3IP1-204ENST00000462122 HTR3DQ70Z44 454 aa12.18□□□□□ -0.46
TRAF3IP1-204ENST00000462122 SLC30A5Q8TAD4 765 aa12.18□□□□□ -0.46
TRAF3IP1-204ENST00000462122 OLIG1Q8TAK6 271 aa12.18□□□□□ -0.46
TRAF3IP1-204ENST00000462122 DQX1Q8TE96 717 aaKnown RBP12.18□□□□□ -0.46
TRAF3IP1-204ENST00000462122 ATP2A3Q93084 1043 aa12.18□□□□□ -0.46
TRAF3IP1-204ENST00000462122 PLD4Q96BZ4 506 aa12.18□□□□□ -0.46
TRAF3IP1-204ENST00000462122 ASIC4Q96FT7 647 aa12.18□□□□□ -0.46
TRAF3IP1-204ENST00000462122 MSANTD3Q96H12 275 aa12.18□□□□□ -0.46
TRAF3IP1-204ENST00000462122 PIWIL1Q96J94 861 aaKnown RBP12.18□□□□□ -0.46
TRAF3IP1-204ENST00000462122 SLC2A13Q96QE2 648 aa12.18□□□□□ -0.46
TRAF3IP1-204ENST00000462122 C11orf70Q9BRQ4 267 aa12.18□□□□□ -0.46
TRAF3IP1-204ENST00000462122 DCLK3Q9C098 648 aa12.18□□□□□ -0.46
TRAF3IP1-204ENST00000462122 ARHGEF3Q9NR81 526 aa12.18□□□□□ -0.46
TRAF3IP1-204ENST00000462122 GKN1Q9NS71 199 aa12.18□□□□□ -0.46
TRAF3IP1-204ENST00000462122 ABHD10Q9NUJ1 306 aa12.18□□□□□ -0.46
TRAF3IP1-204ENST00000462122 DUS2Q9NX74 493 aaKnown RBP12.18□□□□□ -0.46
TRAF3IP1-204ENST00000462122 ADAM22Q9P0K1 906 aa12.18□□□□□ -0.46
TRAF3IP1-204ENST00000462122 HELZP42694 1942 aaKnown RBP12.17□□□□□ -0.46
TRAF3IP1-204ENST00000462122 AKR1B15C9JRZ8 316 aaPredicted RBP12.17□□□□□ -0.46
TRAF3IP1-204ENST00000462122 DLL1O00548 723 aa12.17□□□□□ -0.46
TRAF3IP1-204ENST00000462122 STC2O76061 302 aa12.17□□□□□ -0.46
TRAF3IP1-204ENST00000462122 FYNP06241 537 aa12.17□□□□□ -0.46
TRAF3IP1-204ENST00000462122 IRF1P10914 325 aa12.17□□□□□ -0.46
TRAF3IP1-204ENST00000462122 SKILP12757 684 aa12.17□□□□□ -0.46
TRAF3IP1-204ENST00000462122 GLULP15104 373 aa12.17□□□□□ -0.46
TRAF3IP1-204ENST00000462122 NOS2P35228 1153 aa12.17□□□□□ -0.46
TRAF3IP1-204ENST00000462122 CDK17Q00537 523 aa12.17□□□□□ -0.46
TRAF3IP1-204ENST00000462122 PRKCQQ04759 706 aa12.17□□□□□ -0.46
TRAF3IP1-204ENST00000462122 PTP4A2Q12974 167 aa12.17□□□□□ -0.46
TRAF3IP1-204ENST00000462122 RUNX3Q13761 415 aa12.17□□□□□ -0.46
TRAF3IP1-204ENST00000462122 TAF5Q15542 800 aa12.17□□□□□ -0.46
TRAF3IP1-204ENST00000462122 TRIP4Q15650 581 aaPredicted RBP12.17□□□□□ -0.46
TRAF3IP1-204ENST00000462122 EML3Q32P44 896 aa12.17□□□□□ -0.46
TRAF3IP1-204ENST00000462122 DCAF6Q58WW2 860 aa12.17□□□□□ -0.46
TRAF3IP1-204ENST00000462122 C1orf228Q6PIY5 440 aa12.17□□□□□ -0.46
TRAF3IP1-204ENST00000462122 MON1BQ7L1V2 547 aa12.17□□□□□ -0.46
TRAF3IP1-204ENST00000462122 ARCQ7LC44 396 aa12.17□□□□□ -0.46
TRAF3IP1-204ENST00000462122 CPA6Q8N4T0 437 aa12.17□□□□□ -0.46
TRAF3IP1-204ENST00000462122 SHDQ96IW2 340 aa12.17□□□□□ -0.46
TRAF3IP1-204ENST00000462122 VCPIP1Q96JH7 1222 aa12.17□□□□□ -0.46
TRAF3IP1-204ENST00000462122 ZFYVE19Q96K21 471 aa12.17□□□□□ -0.46
TRAF3IP1-204ENST00000462122 C8orf33Q9H7E9 229 aaPredicted RBP12.17□□□□□ -0.46
TRAF3IP1-204ENST00000462122 TMEM51Q9NW97 253 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms