RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 HUS1O60921 280 aa12.39□□□□□ -0.43
PTPRN-204ENST00000423636 SRGAP2BP0DMP2 458 aa12.39□□□□□ -0.43
PTPRN-204ENST00000423636 ELNP15502 786 aa12.39□□□□□ -0.43
PTPRN-204ENST00000423636 GBP1P32455 592 aa12.39□□□□□ -0.43
PTPRN-204ENST00000423636 GRM5P41594 1212 aa12.39□□□□□ -0.43
PTPRN-204ENST00000423636 LILRA4P59901 499 aa12.39□□□□□ -0.43
PTPRN-204ENST00000423636 C16orf46Q6P387 395 aa12.39□□□□□ -0.43
PTPRN-204ENST00000423636 SPATA21Q7Z572 469 aa12.39□□□□□ -0.43
PTPRN-204ENST00000423636 PDCD7Q8N8D1 485 aaKnown RBP12.39□□□□□ -0.43
PTPRN-204ENST00000423636 SLC7A14Q8TBB6 771 aa12.39□□□□□ -0.43
PTPRN-204ENST00000423636 L3MBTL3Q96JM7 780 aaPredicted RBP12.39□□□□□ -0.43
PTPRN-204ENST00000423636 NUMBLQ9Y6R0 609 aa12.39□□□□□ -0.43
PTPRN-204ENST00000423636 TPH1P17752 444 aa12.39□□□□□ -0.43
PTPRN-204ENST00000423636 CAP1Q01518 475 aa12.39□□□□□ -0.43
PTPRN-204ENST00000423636 MORF4L2Q15014 288 aa12.39□□□□□ -0.43
PTPRN-204ENST00000423636 EMC10Q5UCC4 262 aa12.39□□□□□ -0.43
PTPRN-204ENST00000423636 SMG8Q8ND04 991 aaKnown RBP12.39□□□□□ -0.43
PTPRN-204ENST00000423636 AGR3Q8TD06 166 aa12.39□□□□□ -0.43
PTPRN-204ENST00000423636 NKD2Q969F2 451 aaPredicted RBP12.39□□□□□ -0.43
PTPRN-204ENST00000423636 AZIN2Q96A70 460 aa12.39□□□□□ -0.43
PTPRN-204ENST00000423636 SMYD2Q9NRG4 433 aa12.39□□□□□ -0.43
PTPRN-204ENST00000423636 PHTF1Q9UMS5 762 aa12.39□□□□□ -0.43
PTPRN-204ENST00000423636 GABRQQ9UN88 632 aa12.39□□□□□ -0.43
PTPRN-204ENST00000423636 IKBKGQ9Y6K9 419 aa12.39□□□□□ -0.43
PTPRN-204ENST00000423636 CAPN9O14815 690 aa12.39□□□□□ -0.43
PTPRN-204ENST00000423636 ALOX15BO15296 676 aa12.39□□□□□ -0.43
PTPRN-204ENST00000423636 LMNB2Q03252 620 aa12.39□□□□□ -0.43
PTPRN-204ENST00000423636 PTK7Q13308 1070 aa12.39□□□□□ -0.43
PTPRN-204ENST00000423636 STAT4Q14765 748 aa12.39□□□□□ -0.43
PTPRN-204ENST00000423636 FAM219BQ5XKK7 198 aa12.39□□□□□ -0.43
PTPRN-204ENST00000423636 MFSD5Q6N075 450 aa12.39□□□□□ -0.43
PTPRN-204ENST00000423636 ECHDC2Q86YB7 292 aa12.39□□□□□ -0.43
PTPRN-204ENST00000423636 ZC3H15Q8WU90 426 aaKnown RBP12.39□□□□□ -0.43
PTPRN-204ENST00000423636 PARK7Q99497 189 aaKnown RBP12.39□□□□□ -0.43
PTPRN-204ENST00000423636 ROPN1BQ9BZX4 212 aaPredicted RBP12.39□□□□□ -0.43
PTPRN-204ENST00000423636 STMN4Q9H169 189 aaPredicted RBP12.39□□□□□ -0.43
PTPRN-204ENST00000423636 ECT2Q9H8V3 914 aa12.39□□□□□ -0.43
PTPRN-204ENST00000423636 ROPN1Q9HAT0 212 aaPredicted RBP12.39□□□□□ -0.43
PTPRN-204ENST00000423636 KRT82Q9NSB4 513 aa12.39□□□□□ -0.43
PTPRN-204ENST00000423636 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.39□□□□□ -0.43
PTPRN-204ENST00000423636 USP15Q9Y4E8 981 aaPredicted RBP12.39□□□□□ -0.43
PTPRN-204ENST00000423636 FARP1Q9Y4F1 1045 aaPredicted RBP12.39□□□□□ -0.43
PTPRN-204ENST00000423636 IQCA1LA6NCM1 817 aa12.38□□□□□ -0.43
PTPRN-204ENST00000423636 STRNO43815 780 aa12.38□□□□□ -0.43
PTPRN-204ENST00000423636 CSPG5O95196 566 aa12.38□□□□□ -0.43
PTPRN-204ENST00000423636 ITGB1P05556 798 aa12.38□□□□□ -0.43
PTPRN-204ENST00000423636 BGNP21810 368 aa12.38□□□□□ -0.43
PTPRN-204ENST00000423636 CPA2P48052 419 aa12.38□□□□□ -0.43
PTPRN-204ENST00000423636 IL31Q6EBC2 164 aa12.38□□□□□ -0.43
PTPRN-204ENST00000423636 CKAP2Q8WWK9 683 aa12.38□□□□□ -0.43
PTPRN-204ENST00000423636 ERP27Q96DN0 273 aa12.38□□□□□ -0.43
PTPRN-204ENST00000423636 B3GALT6Q96L58 329 aa12.38□□□□□ -0.43
PTPRN-204ENST00000423636 AP5M1Q9H0R1 490 aa12.38□□□□□ -0.43
PTPRN-204ENST00000423636 AGO3Q9H9G7 860 aaKnown RBP12.38□□□□□ -0.43
PTPRN-204ENST00000423636 USP29Q9HBJ7 922 aa12.38□□□□□ -0.43
PTPRN-204ENST00000423636 HAO1Q9UJM8 370 aa12.38□□□□□ -0.43
PTPRN-204ENST00000423636 PTGESO14684 152 aa12.38□□□□□ -0.43
PTPRN-204ENST00000423636 FSCN1Q16658 493 aaKnown RBP12.38□□□□□ -0.43
PTPRN-204ENST00000423636 SYDE1Q6ZW31 735 aaPredicted RBP12.38□□□□□ -0.43
PTPRN-204ENST00000423636 FAM228AQ86W67 206 aa12.38□□□□□ -0.43
PTPRN-204ENST00000423636 FUKQ8N0W3 1084 aa12.38□□□□□ -0.43
PTPRN-204ENST00000423636 RFWD2Q8NHY2 731 aa12.38□□□□□ -0.43
PTPRN-204ENST00000423636 NRDE2Q9H7Z3 1164 aa12.38□□□□□ -0.43
PTPRN-204ENST00000423636 RSAD1Q9HA92 442 aa12.38□□□□□ -0.43
PTPRN-204ENST00000423636 DDX43Q9NXZ2 648 aaKnown RBP12.38□□□□□ -0.43
PTPRN-204ENST00000423636 ZC3H7BQ9UGR2 993 aaKnown RBP12.38□□□□□ -0.43
PTPRN-204ENST00000423636 ST3GAL5Q9UNP4 418 aa12.38□□□□□ -0.43
PTPRN-204ENST00000423636 C2CD2Q9Y426 696 aa12.38□□□□□ -0.43
PTPRN-204ENST00000423636 CDY2AQ9Y6F7 541 aa12.38□□□□□ -0.43
PTPRN-204ENST00000423636 WDR27A2RRH5 827 aa12.37□□□□□ -0.43
PTPRN-204ENST00000423636 YJEFN3A6XGL0 299 aa12.37□□□□□ -0.43
PTPRN-204ENST00000423636 TRIM49D1C9J1S8 452 aa12.37□□□□□ -0.43
PTPRN-204ENST00000423636 E7ENQ6 273 aa12.37□□□□□ -0.43
PTPRN-204ENST00000423636 MFSD11O43934 449 aa12.37□□□□□ -0.43
PTPRN-204ENST00000423636 RPSAP08865 295 aaKnown RBP12.37□□□□□ -0.43
PTPRN-204ENST00000423636 PGFP49763 221 aa12.37□□□□□ -0.43
PTPRN-204ENST00000423636 GEMIN4P57678 1058 aaKnown RBP12.37□□□□□ -0.43
PTPRN-204ENST00000423636 NBPF20Q3BBV1 942 aa12.37□□□□□ -0.43
PTPRN-204ENST00000423636 UBXN11Q5T124 520 aa12.37□□□□□ -0.43
PTPRN-204ENST00000423636 PIGWQ7Z7B1 504 aa12.37□□□□□ -0.43
PTPRN-204ENST00000423636 EXOC8Q8IYI6 725 aa12.37□□□□□ -0.43
PTPRN-204ENST00000423636 SCAMP5Q8TAC9 235 aa12.37□□□□□ -0.43
PTPRN-204ENST00000423636 KCNV2Q8TDN2 545 aa12.37□□□□□ -0.43
PTPRN-204ENST00000423636 LRRC8CQ8TDW0 803 aa12.37□□□□□ -0.43
PTPRN-204ENST00000423636 PPP1R36Q96LQ0 422 aa12.37□□□□□ -0.43
PTPRN-204ENST00000423636 KLC4Q9NSK0 619 aa12.37□□□□□ -0.43
PTPRN-204ENST00000423636 PCMTD2Q9NV79 361 aa12.37□□□□□ -0.43
PTPRN-204ENST00000423636 MYO7AQ13402 2215 aa12.37□□□□□ -0.43
PTPRN-204ENST00000423636 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.37□□□□□ -0.43
PTPRN-204ENST00000423636 I6L893 689 aaPredicted RBP12.37□□□□□ -0.43
PTPRN-204ENST00000423636 MOCS2O96007 188 aaPredicted RBP12.37□□□□□ -0.43
PTPRN-204ENST00000423636 MT-ND3P03897 115 aa12.37□□□□□ -0.43
PTPRN-204ENST00000423636 INHBAP08476 426 aa12.37□□□□□ -0.43
PTPRN-204ENST00000423636 ZNF865P0CJ78 1059 aaPredicted RBP12.37□□□□□ -0.43
PTPRN-204ENST00000423636 NCAM1P13591 858 aa12.37□□□□□ -0.43
PTPRN-204ENST00000423636 CD52P31358 61 aa12.37□□□□□ -0.43
PTPRN-204ENST00000423636 L1CAMP32004 1257 aa12.37□□□□□ -0.43
PTPRN-204ENST00000423636 THPOP40225 353 aa12.37□□□□□ -0.43
PTPRN-204ENST00000423636 NOMO1Q15155 1222 aa12.37□□□□□ -0.43
PTPRN-204ENST00000423636 TNFAIP8L3Q5GJ75 292 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms