RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 EEFSECP57772 596 aaKnown RBP3.1□□□□□ -1.91
VPS41-206ENST00000418457 SUMO2P61956 95 aaKnown RBP3.1□□□□□ -1.91
VPS41-206ENST00000418457 GPS1Q13098 491 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 CYP1B1Q16678 543 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 SLC5A9Q2M3M2 681 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 TBC1D25Q3MII6 688 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.1□□□□□ -1.91
VPS41-206ENST00000418457 AARS2Q5JTZ9 985 aaKnown RBP3.1□□□□□ -1.91
VPS41-206ENST00000418457 AKNAD1Q5T1N1 836 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 TSTD2Q5T7W7 516 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 MRNIPQ6NTE8 343 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 CLEC9AQ6UXN8 241 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 DPY19L3Q6ZPD9 716 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 Q6ZWC4 215 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 USP49Q70CQ1 688 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 CENPQQ7L2Z9 268 aaPredicted RBP3.1□□□□□ -1.91
VPS41-206ENST00000418457 ZNF804AQ7Z570 1209 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 RASAL3Q86YV0 1011 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 MYLK4Q86YV6 388 aaPredicted RBP3.1□□□□□ -1.91
VPS41-206ENST00000418457 CCDC28AQ8IWP9 274 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 FSTL5Q8N475 847 aaPredicted RBP3.1□□□□□ -1.91
VPS41-206ENST00000418457 NGEFQ8N5V2 710 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 SIRT6Q8N6T7 355 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 C11orf44Q8N8P7 122 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 GOLGA6L2Q8N9W4 650 aaPredicted RBP3.1□□□□□ -1.91
VPS41-206ENST00000418457 GLIS1Q8NBF1 620 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 SIMC1Q8NDZ2 872 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 ABHD11Q8NFV4 315 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 PMM1Q92871 262 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 MUL1Q969V5 352 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 TMEM41AQ96HV5 264 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 UROC1Q96N76 676 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 AGAP2Q99490 1192 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 STK33Q9BYT3 514 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 TRIM36Q9NQ86 728 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 NECTIN3Q9NQS3 549 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 DUSP22Q9NRW4 184 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 DLL3Q9NYJ7 618 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 NKX1-2Q9UD57 310 aaPredicted RBP3.1□□□□□ -1.91
VPS41-206ENST00000418457 STEAP1Q9UHE8 339 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 VPS51Q9UID3 782 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 SLC39A10Q9ULF5 831 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 RIMKLBQ9ULI2 386 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 ZMYND8Q9ULU4 1186 aaPredicted RBP3.1□□□□□ -1.91
VPS41-206ENST00000418457 GABRQQ9UN88 632 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 MAGED2Q9UNF1 606 aaPredicted RBP3.1□□□□□ -1.91
VPS41-206ENST00000418457 SLC27A6Q9Y2P4 619 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 ENTPD2Q9Y5L3 495 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 TDRD9Q8NDG6 1382 aaKnown RBP3.1□□□□□ -1.91
VPS41-206ENST00000418457 NINLQ9Y2I6 1382 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 PTPRGP23470 1445 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 NUP160Q12769 1436 aa3.1□□□□□ -1.91
VPS41-206ENST00000418457 TROQ12816 1431 aaPredicted RBP3.1□□□□□ -1.91
VPS41-206ENST00000418457 PRDM15P57071 1507 aaPredicted RBP3.09□□□□□ -1.91
VPS41-206ENST00000418457 F5H423 210 aaPredicted RBP3.09□□□□□ -1.91
VPS41-206ENST00000418457 M0R3H8 397 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 CES2O00748 559 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 KIAA0355O15063 1070 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 PMPCBO75439 489 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 TJP3O95049 919 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 LDHAP00338 332 aaKnown RBP3.09□□□□□ -1.91
VPS41-206ENST00000418457 ARP10275 920 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 DRD4P21917 467 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 YY1P25490 414 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 CTGFP29279 349 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 SLC5A2P31639 672 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 IL6STP40189 918 aaPredicted RBP3.09□□□□□ -1.91
VPS41-206ENST00000418457 SOX10P56693 466 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 E2F1Q01094 437 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 TNFAIP2Q03169 654 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 COL10A1Q03692 680 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 NSUN2Q08J23 767 aaKnown RBP eCLIP3.09□□□□□ -1.91
VPS41-206ENST00000418457 CHAF1AQ13111 956 aaPredicted RBP3.09□□□□□ -1.91
VPS41-206ENST00000418457 CLCA4Q14CN2 919 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 RAB30Q15771 203 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 MAPKAPK3Q16644 382 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 GLIPR1L2Q4G1C9 344 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 PCID2Q5JVF3 399 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 L1TD1Q5T7N2 865 aaKnown RBP3.09□□□□□ -1.91
VPS41-206ENST00000418457 ARL6IP4Q66PJ3 421 aaKnown RBP3.09□□□□□ -1.91
VPS41-206ENST00000418457 RAP1GAP2Q684P5 730 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 ABLIM2Q6H8Q1 611 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 PGBD2Q6P3X8 592 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 MTHFD1LQ6UB35 978 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 SLC29A4Q7RTT9 530 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 ZNF527Q8NB42 609 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 VPS37AQ8NEZ2 397 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 MBD3L2Q8NHZ7 208 aaPredicted RBP3.09□□□□□ -1.91
VPS41-206ENST00000418457 ABHD5Q8WTS1 349 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 TBC1D5Q92609 795 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 GRAMD1AQ96CP6 724 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 PRR25Q96S07 402 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 CRB3Q9BUF7 120 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 TTLL2Q9BWV7 592 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 FSD1LQ9BXM9 530 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 KRTAP4-9Q9BYQ8 210 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 WDR12Q9GZL7 423 aaKnown RBP3.09□□□□□ -1.91
VPS41-206ENST00000418457 SYNPO2LQ9H987 977 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 CPNE5Q9HCH3 593 aa3.09□□□□□ -1.91
VPS41-206ENST00000418457 ALG13Q9NP73 1137 aaKnown RBP3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms