RNA–Protein interactions for RNA: ENST00000398145.6

HPS4-202, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS4, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-202ENST00000398145 TERB1Q8NA31 727 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 FAM81AQ8TBF8 368 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 VPS50Q96JG6 964 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 PHACTR1Q9C0D0 580 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 AP4E1Q9UPM8 1137 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 V9GYQ6 96 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 C3P01024 1663 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 HEATR9A2RTY3 570 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 USP1O94782 785 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 ZNF23P17027 643 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 PTGIRP43119 386 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 ACAP1Q15027 740 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 SLC1A5Q15758 541 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 AGKQ53H12 422 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 C16orf46Q6P387 395 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 AAGABQ6PD74 315 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 COLGALT1Q8NBJ5 622 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 SHCBP1Q8NEM2 672 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 SLC7A14Q8TBB6 771 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 PDCD6IPQ8WUM4 868 aaKnown RBP11.39□□□□□ -0.59
HPS4-202ENST00000398145 TMEM176AQ96HP8 235 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 PRMT6Q96LA8 375 aaPredicted RBP11.39□□□□□ -0.59
HPS4-202ENST00000398145 PPP1R2P1Q96PQ5 205 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 ZNF317Q96PQ6 595 aaPredicted RBP11.39□□□□□ -0.59
HPS4-202ENST00000398145 NDNQ99608 321 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 EGFL8Q99944 293 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 CHST12Q9NRB3 414 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 SLIT3O75094 1523 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 SUPT20HL2P0C7V6 817 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 SP100P23497 879 aaPredicted RBP11.39□□□□□ -0.59
HPS4-202ENST00000398145 CAP2P40123 477 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 ALDH1A3P47895 512 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 FOXD4Q12950 439 aaPredicted RBP11.39□□□□□ -0.59
HPS4-202ENST00000398145 RBBP7Q16576 425 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 DGKDQ16760 1214 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 MICU2Q8IYU8 434 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 TNIP2Q8NFZ5 429 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 DCUN1D5Q9BTE7 237 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 IKZF4Q9H2S9 585 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 COPS7BQ9H9Q2 264 aaPredicted RBP11.39□□□□□ -0.59
HPS4-202ENST00000398145 ZDHHC18Q9NUE0 388 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.39□□□□□ -0.59
HPS4-202ENST00000398145 LGALS13Q9UHV8 139 aa11.39□□□□□ -0.59
HPS4-202ENST00000398145 R3HDM2Q9Y2K5 976 aaKnown RBP11.39□□□□□ -0.59
HPS4-202ENST00000398145 CASZ1Q86V15 1759 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 CYP2F1P24903 491 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 HMOX2P30519 316 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 S100A5P33763 92 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 CLK1P49759 484 aaKnown RBP11.38□□□□□ -0.59
HPS4-202ENST00000398145 TAS2R40P59535 323 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 BTBD8Q5XKL5 378 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 CWF19L1Q69YN2 538 aaKnown RBP11.38□□□□□ -0.59
HPS4-202ENST00000398145 ISLR2Q6UXK2 745 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 BBS12Q6ZW61 710 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 ARCQ7LC44 396 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 CLVS1Q8IUQ0 354 aaPredicted RBP11.38□□□□□ -0.59
HPS4-202ENST00000398145 THEM5Q8N1Q8 247 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 ZNF280CQ8ND82 737 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 PIK3R5Q8WYR1 880 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 MKL1Q969V6 931 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 CYP3A43Q9HB55 503 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 TMEM59LQ9UK28 342 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 A0A096LPK6 155 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 FOXO6A8MYZ6 492 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 CHADO15335 359 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 BANF1O75531 89 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 NFKBIAP25963 317 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 TSPY1Q01534 308 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 GRM1Q13255 1194 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 ANO4Q32M45 955 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 EFCAB12Q6NXP0 572 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 MPZL3Q6UWV2 235 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 DLG3Q92796 817 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 TUBGCP3Q96CW5 907 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 CCDC28BQ9BUN5 200 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 IARS2Q9NSE4 1012 aaKnown RBP11.38□□□□□ -0.59
HPS4-202ENST00000398145 GGA3Q9NZ52 723 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 DDHD2O94830 711 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 NPTXRO95502 500 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 SERPINA6P08185 405 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 TPBGLP0DKB5 382 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 RBL1P28749 1068 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 ZDHHC24Q6UX98 284 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 ACOT1Q86TX2 421 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 FAM131BQ86XD5 332 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 UNC45BQ8IWX7 931 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 WDR60Q8WVS4 1066 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 NMUR2Q9GZQ4 415 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 EBF2Q9HAK2 575 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 SLC17A7Q9P2U7 560 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 GAKO14976 1311 aa11.38□□□□□ -0.59
HPS4-202ENST00000398145 M0QYT0 321 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 UBDO15205 165 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 ANXA9O76027 345 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 ETS2P15036 469 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 AVPR1AP37288 418 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 IREB2P48200 963 aaKnown RBP11.37□□□□□ -0.59
HPS4-202ENST00000398145 RPL7AP62424 266 aaKnown RBP11.37□□□□□ -0.59
HPS4-202ENST00000398145 ZNF235Q14590 738 aa11.37□□□□□ -0.59
HPS4-202ENST00000398145 GLRA4Q5JXX5 417 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms