RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 ASRGL1Q7L266 308 aa17.7■□□□□ 0.42
RXRB-201ENST00000374680 CCNYQ8ND76 341 aa17.7■□□□□ 0.42
RXRB-201ENST00000374680 TBC1D10AQ9BXI6 508 aa17.7■□□□□ 0.42
RXRB-201ENST00000374680 KANSL3Q9P2N6 904 aa17.7■□□□□ 0.42
RXRB-201ENST00000374680 KCNH4Q9UQ05 1017 aa17.7■□□□□ 0.42
RXRB-201ENST00000374680 IQANK1A0A1B0GTG1 560 aa17.7■□□□□ 0.42
RXRB-201ENST00000374680 E7ESA3 106 aa17.7■□□□□ 0.42
RXRB-201ENST00000374680 SLC8A1P32418 973 aa17.7■□□□□ 0.42
RXRB-201ENST00000374680 NDUFV1P49821 464 aa17.7■□□□□ 0.42
RXRB-201ENST00000374680 SESN3P58005 492 aa17.7■□□□□ 0.42
RXRB-201ENST00000374680 BOLA3Q53S33 107 aa17.7■□□□□ 0.42
RXRB-201ENST00000374680 ATXN7L3BQ96GX2 97 aa17.7■□□□□ 0.42
RXRB-201ENST00000374680 PLCD4Q9BRC7 762 aa17.7■□□□□ 0.42
RXRB-201ENST00000374680 NRDE2Q9H7Z3 1164 aa17.7■□□□□ 0.42
RXRB-201ENST00000374680 TIMM13Q9Y5L4 95 aaPredicted RBP17.7■□□□□ 0.42
RXRB-201ENST00000374680 RGPD3A6NKT7 1758 aaPredicted RBP17.69■□□□□ 0.42
RXRB-201ENST00000374680 RGPD4Q7Z3J3 1758 aa17.69■□□□□ 0.42
RXRB-201ENST00000374680 LOC102724159A0A0B4J2E5 919 aa17.69■□□□□ 0.42
RXRB-201ENST00000374680 ENTPD5O75356 428 aa17.69■□□□□ 0.42
RXRB-201ENST00000374680 TROVE2P10155 538 aaKnown RBP eCLIP17.69■□□□□ 0.42
RXRB-201ENST00000374680 SNAPC2Q13487 334 aa17.69■□□□□ 0.42
RXRB-201ENST00000374680 PWP2Q15269 919 aaKnown RBP17.69■□□□□ 0.42
RXRB-201ENST00000374680 C16orf46Q6P387 395 aa17.69■□□□□ 0.42
RXRB-201ENST00000374680 TTC8Q8TAM2 541 aa17.69■□□□□ 0.42
RXRB-201ENST00000374680 SLC35F5Q8WV83 523 aa17.69■□□□□ 0.42
RXRB-201ENST00000374680 SRPK1Q96SB4 655 aaKnown RBP17.69■□□□□ 0.42
RXRB-201ENST00000374680 CSH1P0DML2 217 aa17.69■□□□□ 0.42
RXRB-201ENST00000374680 CSH2P0DML3 217 aa17.69■□□□□ 0.42
RXRB-201ENST00000374680 GNL1P36915 607 aaPredicted RBP17.69■□□□□ 0.42
RXRB-201ENST00000374680 DCAF6Q58WW2 860 aa17.69■□□□□ 0.42
RXRB-201ENST00000374680 NME8Q8N427 588 aa17.69■□□□□ 0.42
RXRB-201ENST00000374680 PPTC7Q8NI37 304 aa17.69■□□□□ 0.42
RXRB-201ENST00000374680 TMEM40Q8WWA1 233 aa17.69■□□□□ 0.42
RXRB-201ENST00000374680 SLC44A1Q8WWI5 657 aa17.69■□□□□ 0.42
RXRB-201ENST00000374680 AGAP3Q96P47 875 aa17.69■□□□□ 0.42
RXRB-201ENST00000374680 TBCBQ99426 244 aa17.69■□□□□ 0.42
RXRB-201ENST00000374680 KLC2Q9H0B6 622 aa17.69■□□□□ 0.42
RXRB-201ENST00000374680 TXLNGQ9NUQ3 528 aa17.69■□□□□ 0.42
RXRB-201ENST00000374680 PAK5Q9P286 719 aa17.69■□□□□ 0.42
RXRB-201ENST00000374680 AP4E1Q9UPM8 1137 aa17.69■□□□□ 0.42
RXRB-201ENST00000374680 PTPRFP10586 1907 aa17.69■□□□□ 0.42
RXRB-201ENST00000374680 CCDC78A2IDD5 438 aa17.68■□□□□ 0.42
RXRB-201ENST00000374680 EPHX2P34913 555 aa17.68■□□□□ 0.42
RXRB-201ENST00000374680 INCA1Q0VD86 236 aa17.68■□□□□ 0.42
RXRB-201ENST00000374680 FAM47CQ5HY64 1035 aa17.68■□□□□ 0.42
RXRB-201ENST00000374680 ZNF276Q8N554 614 aa17.68■□□□□ 0.42
RXRB-201ENST00000374680 C2CD2Q9Y426 696 aa17.68■□□□□ 0.42
RXRB-201ENST00000374680 PPME1Q9Y570 386 aa17.68■□□□□ 0.42
RXRB-201ENST00000374680 CCL15-CCL14A0A0B4J2E2 113 aa17.68■□□□□ 0.42
RXRB-201ENST00000374680 BTBD19C9JJ37 291 aa17.68■□□□□ 0.42
RXRB-201ENST00000374680 USP12O75317 370 aa17.68■□□□□ 0.42
RXRB-201ENST00000374680 ARFIP2P53365 341 aa17.68■□□□□ 0.42
RXRB-201ENST00000374680 AP1B1Q10567 949 aa17.68■□□□□ 0.42
RXRB-201ENST00000374680 CCL15Q16663 113 aa17.68■□□□□ 0.42
RXRB-201ENST00000374680 ZNF792Q3KQV3 632 aa17.68■□□□□ 0.42
RXRB-201ENST00000374680 UNC5AQ6ZN44 842 aa17.68■□□□□ 0.42
RXRB-201ENST00000374680 ARL8BQ9NVJ2 186 aa17.68■□□□□ 0.42
RXRB-201ENST00000374680 ENDOD1O94919 500 aa17.68■□□□□ 0.42
RXRB-201ENST00000374680 MYCNP04198 464 aaPredicted RBP17.68■□□□□ 0.42
RXRB-201ENST00000374680 ABCG1P45844 678 aa17.68■□□□□ 0.42
RXRB-201ENST00000374680 FAM187BQ17R55 369 aa17.68■□□□□ 0.42
RXRB-201ENST00000374680 ALYREFQ86V81 257 aaKnown RBP17.68■□□□□ 0.42
RXRB-201ENST00000374680 PDCD7Q8N8D1 485 aaKnown RBP17.68■□□□□ 0.42
RXRB-201ENST00000374680 SLC7A6OSQ96CW6 309 aaPredicted RBP17.68■□□□□ 0.42
RXRB-201ENST00000374680 KCTD15Q96SI1 283 aaPredicted RBP17.68■□□□□ 0.42
RXRB-201ENST00000374680 TMEM120AQ9BXJ8 343 aa17.68■□□□□ 0.42
RXRB-201ENST00000374680 TRIM55Q9BYV6 548 aa17.68■□□□□ 0.42
RXRB-201ENST00000374680 PLAC1Q9HBJ0 212 aa17.68■□□□□ 0.42
RXRB-201ENST00000374680 TTLL3Q9Y4R7 772 aa17.68■□□□□ 0.42
RXRB-201ENST00000374680 ANK1P16157 1881 aa17.67■□□□□ 0.42
RXRB-201ENST00000374680 WDR27A2RRH5 827 aa17.67■□□□□ 0.42
RXRB-201ENST00000374680 DCTN3O75935 186 aa17.67■□□□□ 0.42
RXRB-201ENST00000374680 UPP2O95045 317 aa17.67■□□□□ 0.42
RXRB-201ENST00000374680 MYL2P10916 166 aa17.67■□□□□ 0.42
RXRB-201ENST00000374680 CYP2C9P11712 490 aa17.67■□□□□ 0.42
RXRB-201ENST00000374680 L1CAMP32004 1257 aa17.67■□□□□ 0.42
RXRB-201ENST00000374680 SERPINB4P48594 390 aa17.67■□□□□ 0.42
RXRB-201ENST00000374680 TMPRSS15P98073 1019 aa17.67■□□□□ 0.42
RXRB-201ENST00000374680 BEX3Q00994 111 aa17.67■□□□□ 0.42
RXRB-201ENST00000374680 HIC1Q14526 733 aa17.67■□□□□ 0.42
RXRB-201ENST00000374680 NAA25Q14CX7 972 aa17.67■□□□□ 0.42
RXRB-201ENST00000374680 RFWD3Q6PCD5 774 aa17.67■□□□□ 0.42
RXRB-201ENST00000374680 NDUFAF2Q8N183 169 aa17.67■□□□□ 0.42
RXRB-201ENST00000374680 ZFP42Q96MM3 310 aa17.67■□□□□ 0.42
RXRB-201ENST00000374680 SNX25Q9H3E2 840 aa17.67■□□□□ 0.42
RXRB-201ENST00000374680 BEST1O76090 585 aa17.67■□□□□ 0.42
RXRB-201ENST00000374680 MMP3P08254 477 aa17.67■□□□□ 0.42
RXRB-201ENST00000374680 GM2AP17900 193 aa17.67■□□□□ 0.42
RXRB-201ENST00000374680 SOX4Q06945 474 aaPredicted RBP17.67■□□□□ 0.42
RXRB-201ENST00000374680 ACVR2BQ13705 512 aa17.67■□□□□ 0.42
RXRB-201ENST00000374680 TRIM68Q6AZZ1 485 aa17.67■□□□□ 0.42
RXRB-201ENST00000374680 SLC26A11Q86WA9 606 aa17.67■□□□□ 0.42
RXRB-201ENST00000374680 DEFB106AQ8N104 65 aa17.67■□□□□ 0.42
RXRB-201ENST00000374680 VPS52Q8N1B4 723 aa17.67■□□□□ 0.42
RXRB-201ENST00000374680 LINC01465Q8N7H1 131 aa17.67■□□□□ 0.42
RXRB-201ENST00000374680 DEPDC1BQ8WUY9 529 aa17.67■□□□□ 0.42
RXRB-201ENST00000374680 NCAPGQ9BPX3 1015 aa17.67■□□□□ 0.42
RXRB-201ENST00000374680 DHRS4Q9BTZ2 278 aa17.67■□□□□ 0.42
RXRB-201ENST00000374680 POPDC2Q9HBU9 364 aa17.67■□□□□ 0.42
RXRB-201ENST00000374680 SLC15A5A6NIM6 579 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms