RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 MAGEA10P43363 369 aaPredicted RBP11.86□□□□□ -0.51
VCL-202ENST00000372755 AQP5P55064 265 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 ZNF280DQ6N043 979 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 EXD1Q8NHP7 514 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 CELF2O95319 508 aaKnown RBP11.86□□□□□ -0.51
VCL-202ENST00000372755 KRT6AP02538 564 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 KRT6BP04259 564 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 PRLRP16471 622 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 YY1P25490 414 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 KRT6CP48668 564 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 EFEMP1Q12805 493 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 PDPK2PQ6A1A2 396 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 PLEKHH3Q7Z736 793 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 ITIH5Q86UX2 942 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 FAM45AQ8TCE6 357 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 ANKRD7Q92527 254 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 PHACTR1Q9C0D0 580 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 CYP4F12Q9HCS2 524 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 HAO1Q9UJM8 370 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 PLAGL2Q9UPG8 496 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 PSMD12O00232 456 aaPredicted RBP11.86□□□□□ -0.51
VCL-202ENST00000372755 FKBP6O75344 327 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 CYP2A7P20853 494 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 NME5P56597 212 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 USP49Q70CQ1 688 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 ATG16L2Q8NAA4 619 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 NFKBIZQ9BYH8 718 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 NLNQ9BYT8 704 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 SERHL2Q9H4I8 314 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 CXorf56Q9H5V9 222 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 SERHLQ9NQF3 203 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 FAM25AB3EWG3 89 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 FAM25CB3EWG5 89 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 FAM25GB3EWG6 89 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 CNPP09543 421 aaKnown RBP11.86□□□□□ -0.51
VCL-202ENST00000372755 BST2Q10589 180 aaKnown RBP11.86□□□□□ -0.51
VCL-202ENST00000372755 CYB5D1Q6P9G0 228 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 NEK10Q6ZWH5 1172 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 KRT77Q7Z794 578 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 ATP8B4Q8TF62 1192 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 SIKE1Q9BRV8 207 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 TMEM120AQ9BXJ8 343 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 TMBIM4Q9HC24 238 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 ENOPH1Q9UHY7 261 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 USP18Q9UMW8 372 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 A0A0A6YYK5 440 aaPredicted RBP11.86□□□□□ -0.51
VCL-202ENST00000372755 UBDO15205 165 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 TRAF2Q12933 501 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 GRB10Q13322 594 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 MPP3Q13368 585 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 ACTRT1Q8TDG2 376 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 RPRD1BQ9NQG5 326 aaKnown RBP11.86□□□□□ -0.51
VCL-202ENST00000372755 ARHGEF3Q9NR81 526 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 STARD13Q9Y3M8 1113 aa11.86□□□□□ -0.51
VCL-202ENST00000372755 ACADMP11310 421 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 SLC26A2P50443 739 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 VAC14Q08AM6 782 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 MGAT5Q09328 741 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 ELAVL2Q12926 359 aaKnown RBP11.85□□□□□ -0.51
VCL-202ENST00000372755 ATG4AQ8WYN0 398 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 RNFT2Q96EX2 444 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 MROH8Q9H579 483 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 ACTR8Q9H981 624 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 PXDNLA1KZ92 1463 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 THP07101 528 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 CORO7P57737 925 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 CSHL1Q14406 222 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 WDR36Q8NI36 951 aaKnown RBP11.85□□□□□ -0.51
VCL-202ENST00000372755 OSCP1Q8WVF1 389 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 INTS13Q9NVM9 706 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 ZNF839A8K0R7 811 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 PROSCO94903 275 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 PTPN3P26045 913 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 COX10Q12887 443 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 PLD1Q13393 1074 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 KCNT1Q5JUK3 1230 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 TMEM26Q6ZUK4 368 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 CBWD2Q8IUF1 395 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 PCSK9Q8NBP7 692 aaKnown RBP11.85□□□□□ -0.51
VCL-202ENST00000372755 TMEM176AQ96HP8 235 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 STK39Q9UEW8 545 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 ABCA8O94911 1581 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 MSH3P20585 1137 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 FEN1P39748 380 aaKnown RBP11.85□□□□□ -0.51
VCL-202ENST00000372755 PRKAA2P54646 552 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 ORC1Q13415 861 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 CCNG2Q16589 344 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 NT5MQ9NPB1 228 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 GPATCH2LQ9NWQ4 482 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 TRPC4Q9UBN4 977 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 PLA2G4CQ9UP65 541 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 CENPXA8MT69 81 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 SLC37A4O43826 429 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 PABPC1P11940 636 aaKnown RBP11.85□□□□□ -0.51
VCL-202ENST00000372755 FAM98BQ52LJ0 330 aaKnown RBP11.85□□□□□ -0.51
VCL-202ENST00000372755 OR8H2Q8N162 312 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 KAT2BQ92831 832 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 TLR8Q9NR97 1041 aaKnown RBP11.85□□□□□ -0.51
VCL-202ENST00000372755 TULP4Q9NRJ4 1543 aa11.85□□□□□ -0.51
VCL-202ENST00000372755 USP31Q70CQ4 1352 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms