RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 SYCE1Q8N0S2 351 aa22.46■■□□□ 1.19
TPM1-204ENST00000334895 EFHBQ8N7U6 833 aa22.46■■□□□ 1.19
TPM1-204ENST00000334895 C12orf76Q8N812 135 aaPredicted RBP22.46■■□□□ 1.19
TPM1-204ENST00000334895 PDZD8Q8NEN9 1154 aa22.46■■□□□ 1.19
TPM1-204ENST00000334895 DQX1Q8TE96 717 aaKnown RBP22.46■■□□□ 1.19
TPM1-204ENST00000334895 TRIM62Q9BVG3 475 aa22.46■■□□□ 1.19
TPM1-204ENST00000334895 PRKD2Q9BZL6 878 aa22.46■■□□□ 1.19
TPM1-204ENST00000334895 UXTQ9UBK9 157 aaPredicted RBP22.46■■□□□ 1.19
TPM1-204ENST00000334895 LCMT1Q9UIC8 334 aa22.46■■□□□ 1.19
TPM1-204ENST00000334895 PACSIN2Q9UNF0 486 aaPredicted RBP22.46■■□□□ 1.19
TPM1-204ENST00000334895 DENND4CQ5VZ89 1909 aa22.46■■□□□ 1.19
TPM1-204ENST00000334895 NCK2O43639 380 aa22.46■■□□□ 1.19
TPM1-204ENST00000334895 POU2F2P09086 479 aa22.46■■□□□ 1.19
TPM1-204ENST00000334895 RARGP13631 454 aa22.46■■□□□ 1.19
TPM1-204ENST00000334895 SULT1E1P49888 294 aa22.46■■□□□ 1.19
TPM1-204ENST00000334895 ATXN1P54253 815 aaKnown RBP22.46■■□□□ 1.19
TPM1-204ENST00000334895 EPHA5P54756 1037 aa22.46■■□□□ 1.19
TPM1-204ENST00000334895 HDAC4P56524 1084 aa22.46■■□□□ 1.19
TPM1-204ENST00000334895 TAS2R40P59535 323 aa22.46■■□□□ 1.19
TPM1-204ENST00000334895 SYT10Q6XYQ8 523 aa22.46■■□□□ 1.19
TPM1-204ENST00000334895 TMEM184AQ6ZMB5 413 aa22.46■■□□□ 1.19
TPM1-204ENST00000334895 GAREM2Q75VX8 874 aa22.46■■□□□ 1.19
TPM1-204ENST00000334895 ELMOD1Q8N336 334 aa22.46■■□□□ 1.19
TPM1-204ENST00000334895 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.46■■□□□ 1.19
TPM1-204ENST00000334895 ADAM32Q8TC27 787 aa22.46■■□□□ 1.19
TPM1-204ENST00000334895 FAM172AQ8WUF8 416 aa22.46■■□□□ 1.19
TPM1-204ENST00000334895 CD101Q93033 1021 aa22.46■■□□□ 1.19
TPM1-204ENST00000334895 CORO1BQ9BR76 489 aa22.46■■□□□ 1.19
TPM1-204ENST00000334895 CCSER2Q9H7U1 834 aa22.46■■□□□ 1.19
TPM1-204ENST00000334895 DNMT3BQ9UBC3 853 aaKnown RBP22.46■■□□□ 1.19
TPM1-204ENST00000334895 STAP1Q9ULZ2 295 aa22.46■■□□□ 1.19
TPM1-204ENST00000334895 CCDC195A0A1B0GUA6 201 aa22.45■■□□□ 1.18
TPM1-204ENST00000334895 IGLV3-25P01717 112 aa22.45■■□□□ 1.18
TPM1-204ENST00000334895 SLC1A1P43005 524 aa22.45■■□□□ 1.18
TPM1-204ENST00000334895 CCDC85BQ15834 202 aaPredicted RBP22.45■■□□□ 1.18
TPM1-204ENST00000334895 MEI1Q5TIA1 1274 aa22.45■■□□□ 1.18
TPM1-204ENST00000334895 CC2D1AQ6P1N0 951 aaPredicted RBP22.45■■□□□ 1.18
TPM1-204ENST00000334895 PEX26Q7Z412 305 aa22.45■■□□□ 1.18
TPM1-204ENST00000334895 TAC4Q86UU9 113 aa22.45■■□□□ 1.18
TPM1-204ENST00000334895 CASP10Q92851 521 aa22.45■■□□□ 1.18
TPM1-204ENST00000334895 TLR10Q9BXR5 811 aa22.45■■□□□ 1.18
TPM1-204ENST00000334895 TRPM5Q9NZQ8 1165 aa22.45■■□□□ 1.18
TPM1-204ENST00000334895 DNAI1Q9UI46 699 aa22.45■■□□□ 1.18
TPM1-204ENST00000334895 ENC1O14682 589 aa22.44■■□□□ 1.18
TPM1-204ENST00000334895 ENDOD1O94919 500 aa22.44■■□□□ 1.18
TPM1-204ENST00000334895 TBX18O95935 607 aa22.44■■□□□ 1.18
TPM1-204ENST00000334895 GABRR2P28476 465 aa22.44■■□□□ 1.18
TPM1-204ENST00000334895 CCR2P41597 374 aa22.44■■□□□ 1.18
TPM1-204ENST00000334895 ACAP1Q15027 740 aa22.44■■□□□ 1.18
TPM1-204ENST00000334895 MSANTD2Q6P1R3 559 aa22.44■■□□□ 1.18
TPM1-204ENST00000334895 ELMSAN1Q6PJG2 1045 aa22.44■■□□□ 1.18
TPM1-204ENST00000334895 PPM1EQ8WY54 764 aa22.44■■□□□ 1.18
TPM1-204ENST00000334895 SMOC2Q9H3U7 446 aa22.44■■□□□ 1.18
TPM1-204ENST00000334895 ASAH2Q9NR71 780 aa22.44■■□□□ 1.18
TPM1-204ENST00000334895 AMFRQ9UKV5 643 aa22.44■■□□□ 1.18
TPM1-204ENST00000334895 C2orf16Q68DN1 1984 aa22.44■■□□□ 1.18
TPM1-204ENST00000334895 M0QYT0 321 aa22.43■■□□□ 1.18
TPM1-204ENST00000334895 MDM4O15151 490 aa22.43■■□□□ 1.18
TPM1-204ENST00000334895 SPOPO43791 374 aa22.43■■□□□ 1.18
TPM1-204ENST00000334895 TLR5O60602 858 aa22.43■■□□□ 1.18
TPM1-204ENST00000334895 XYLBO75191 536 aa22.43■■□□□ 1.18
TPM1-204ENST00000334895 TRUB2O95900 331 aaKnown RBP22.43■■□□□ 1.18
TPM1-204ENST00000334895 ATP1A1P05023 1023 aaKnown RBP22.43■■□□□ 1.18
TPM1-204ENST00000334895 TNNT1P13805 278 aa22.43■■□□□ 1.18
TPM1-204ENST00000334895 PTPN2P17706 415 aa22.43■■□□□ 1.18
TPM1-204ENST00000334895 MIPP30301 263 aa22.43■■□□□ 1.18
TPM1-204ENST00000334895 MARCKSL1P49006 195 aa22.43■■□□□ 1.18
TPM1-204ENST00000334895 EIF4EBP2Q13542 120 aaPredicted RBP22.43■■□□□ 1.18
TPM1-204ENST00000334895 STRADAQ7RTN6 431 aa22.43■■□□□ 1.18
TPM1-204ENST00000334895 CMASQ8NFW8 434 aaPredicted RBP22.43■■□□□ 1.18
TPM1-204ENST00000334895 PGAP3Q96FM1 320 aaPredicted RBP22.43■■□□□ 1.18
TPM1-204ENST00000334895 PEBP4Q96S96 227 aa22.43■■□□□ 1.18
TPM1-204ENST00000334895 SFXN1Q9H9B4 322 aa22.43■■□□□ 1.18
TPM1-204ENST00000334895 PIGVQ9NUD9 493 aa22.43■■□□□ 1.18
TPM1-204ENST00000334895 DZANK1Q9NVP4 752 aa22.43■■□□□ 1.18
TPM1-204ENST00000334895 RRN3Q9NYV6 651 aa22.43■■□□□ 1.18
TPM1-204ENST00000334895 SFMBT1Q9UHJ3 866 aa22.43■■□□□ 1.18
TPM1-204ENST00000334895 JRKLQ9Y4A0 524 aa22.43■■□□□ 1.18
TPM1-204ENST00000334895 C2orf78A6NCI8 922 aa22.42■■□□□ 1.18
TPM1-204ENST00000334895 SPDYE4A6NLX3 237 aa22.42■■□□□ 1.18
TPM1-204ENST00000334895 RALAP11233 206 aa22.42■■□□□ 1.18
TPM1-204ENST00000334895 MYL4P12829 197 aa22.42■■□□□ 1.18
TPM1-204ENST00000334895 IL1R2P27930 398 aa22.42■■□□□ 1.18
TPM1-204ENST00000334895 PPP3CCP48454 512 aa22.42■■□□□ 1.18
TPM1-204ENST00000334895 NTHL1P78549 312 aa22.42■■□□□ 1.18
TPM1-204ENST00000334895 SLC25A11Q02978 314 aaKnown RBP22.42■■□□□ 1.18
TPM1-204ENST00000334895 ADAM15Q13444 863 aa22.42■■□□□ 1.18
TPM1-204ENST00000334895 TXNRD3NBQ6F5E7 133 aa22.42■■□□□ 1.18
TPM1-204ENST00000334895 TMC5Q6UXY8 1006 aa22.42■■□□□ 1.18
TPM1-204ENST00000334895 CYP4V2Q6ZWL3 525 aaPredicted RBP22.42■■□□□ 1.18
TPM1-204ENST00000334895 ZNF276Q8N554 614 aa22.42■■□□□ 1.18
TPM1-204ENST00000334895 RNF139Q8WU17 664 aa22.42■■□□□ 1.18
TPM1-204ENST00000334895 KRT35Q92764 455 aa22.42■■□□□ 1.18
TPM1-204ENST00000334895 HES6Q96HZ4 224 aa22.42■■□□□ 1.18
TPM1-204ENST00000334895 WDR6Q9NNW5 1121 aaKnown RBP22.42■■□□□ 1.18
TPM1-204ENST00000334895 SYNJ2BP-COX16A0A087WUM0 186 aa22.42■■□□□ 1.18
TPM1-204ENST00000334895 MSI1O43347 362 aaKnown RBP22.42■■□□□ 1.18
TPM1-204ENST00000334895 MOSPD3O75425 235 aa22.42■■□□□ 1.18
TPM1-204ENST00000334895 RNF8O76064 485 aa22.42■■□□□ 1.18
TPM1-204ENST00000334895 OAS1P00973 400 aaKnown RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms