RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 SLITRK6Q9H5Y7 841 aa16.09■□□□□ 0.17
PDLIM5-202ENST00000318007 ZWILCHQ9H900 591 aa16.09■□□□□ 0.17
PDLIM5-202ENST00000318007 ABCC13Q9NSE7 274 aa16.09■□□□□ 0.17
PDLIM5-202ENST00000318007 DDIT4Q9NX09 232 aa16.09■□□□□ 0.17
PDLIM5-202ENST00000318007 RASAL2Q9UJF2 1139 aa16.09■□□□□ 0.17
PDLIM5-202ENST00000318007 SART1O43290 800 aaKnown RBP16.08■□□□□ 0.16
PDLIM5-202ENST00000318007 TLR5O60602 858 aa16.08■□□□□ 0.16
PDLIM5-202ENST00000318007 RHOP08100 348 aa16.08■□□□□ 0.16
PDLIM5-202ENST00000318007 MARCKSL1P49006 195 aa16.08■□□□□ 0.16
PDLIM5-202ENST00000318007 ZNF143P52747 638 aaPredicted RBP16.08■□□□□ 0.16
PDLIM5-202ENST00000318007 SKIV2LQ15477 1246 aaKnown RBP16.08■□□□□ 0.16
PDLIM5-202ENST00000318007 TXNRD3NBQ6F5E7 133 aa16.08■□□□□ 0.16
PDLIM5-202ENST00000318007 PDZD4Q76G19 769 aaPredicted RBP16.08■□□□□ 0.16
PDLIM5-202ENST00000318007 PEX26Q7Z412 305 aa16.08■□□□□ 0.16
PDLIM5-202ENST00000318007 TAC4Q86UU9 113 aa16.08■□□□□ 0.16
PDLIM5-202ENST00000318007 TMC8Q8IU68 726 aa16.08■□□□□ 0.16
PDLIM5-202ENST00000318007 ARFGAP1Q8N6T3 406 aa16.08■□□□□ 0.16
PDLIM5-202ENST00000318007 MAB21L3Q8N8X9 362 aa16.08■□□□□ 0.16
PDLIM5-202ENST00000318007 LRRC57Q8N9N7 239 aa16.08■□□□□ 0.16
PDLIM5-202ENST00000318007 ZNF707Q96C28 371 aaPredicted RBP16.08■□□□□ 0.16
PDLIM5-202ENST00000318007 SLC22A12Q96S37 553 aa16.08■□□□□ 0.16
PDLIM5-202ENST00000318007 TTLL2Q9BWV7 592 aa16.08■□□□□ 0.16
PDLIM5-202ENST00000318007 SMG9Q9H0W8 520 aaKnown RBP16.08■□□□□ 0.16
PDLIM5-202ENST00000318007 SMPD4Q9NXE4 827 aa16.08■□□□□ 0.16
PDLIM5-202ENST00000318007 IL37Q9NZH6 218 aa16.08■□□□□ 0.16
PDLIM5-202ENST00000318007 TRPM5Q9NZQ8 1165 aa16.08■□□□□ 0.16
PDLIM5-202ENST00000318007 IP6K2Q9UHH9 426 aa16.08■□□□□ 0.16
PDLIM5-202ENST00000318007 FAM92AA1XBS5 289 aa16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 ZNF840PA6NDX5 716 aa16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 TBX10O75333 385 aa16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 LRCH4O75427 683 aa16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 SP100P23497 879 aaPredicted RBP16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 CXCR5P32302 372 aa16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 NOS2P35228 1153 aa16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 CBX2Q14781 532 aaPredicted RBP16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 IFI16Q16666 785 aaKnown RBP16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 OTUD1Q5VV17 481 aaPredicted RBP16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 ZNF662Q6ZS27 426 aa16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 RNF10Q8N5U6 811 aaKnown RBP16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 TRIM58Q8NG06 486 aa16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 DQX1Q8TE96 717 aaKnown RBP16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 IRGQQ8WZA9 623 aa16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 SLC2A13Q96QE2 648 aa16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 IL21Q9HBE4 155 aa16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 PIGVQ9NUD9 493 aa16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 MAFFQ9ULX9 164 aa16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 XYLBO75191 536 aa16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 PROSCO94903 275 aa16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 ATP1A1P05023 1023 aaKnown RBP16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 IRF1P10914 325 aa16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 GGCXP38435 758 aa16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 TAS2R40P59535 323 aa16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 KCNC3Q14003 757 aa16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 ATP13A4Q4VNC1 1196 aa16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 PABPC1LQ4VXU2 614 aaKnown RBP16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 DNTTIP2Q5QJE6 756 aaKnown RBP16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 CC2D1AQ6P1N0 951 aaPredicted RBP16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 DEFB123Q8N688 67 aa16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 KRT35Q92764 455 aa16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 RNF34Q969K3 372 aa16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 MYRFLQ96LU7 910 aa16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 MAGEB5Q9BZ81 275 aa16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 PRKD2Q9BZL6 878 aa16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 KCND1Q9NSA2 647 aa16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 STAP1Q9ULZ2 295 aa16.07■□□□□ 0.16
PDLIM5-202ENST00000318007 COCHO43405 550 aa16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 RNF8O76064 485 aa16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 MTA2O94776 668 aa16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 TRUB2O95900 331 aaKnown RBP16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 MOCS2O96007 188 aaPredicted RBP16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 HDAC4P56524 1084 aa16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 DEUP1Q05D60 604 aa16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 TEAD2Q15562 447 aa16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 SLC25A52Q3SY17 297 aa16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 NYAP1Q6ZVC0 841 aa16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 ARL14EPQ8N8R7 260 aaPredicted RBP16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 TRMT2BQ96GJ1 504 aaKnown RBP16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 CDX2Q99626 313 aaPredicted RBP16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 CNPY3Q9BT09 278 aa16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 DDX23Q9BUQ8 820 aaKnown RBP16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 LRRC3Q9BY71 257 aa16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 RNF38Q9H0F5 515 aa16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 SFXN1Q9H9B4 322 aa16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 GPATCH2LQ9NWQ4 482 aa16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 UXTQ9UBK9 157 aaPredicted RBP16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 DPP7Q9UHL4 492 aa16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 H3BQ06 376 aaPredicted RBP16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 F11P03951 625 aa16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 GLI1P08151 1106 aa16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 RALAP11233 206 aa16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 PTPN2P17706 415 aa16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 IL1R2P27930 398 aa16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 MIPP30301 263 aa16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 PIGHQ14442 188 aaPredicted RBP16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 HABP4Q5JVS0 413 aaKnown RBP16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 EFHBQ8N7U6 833 aa16.06■□□□□ 0.16
PDLIM5-202ENST00000318007 ITFG1Q8TB96 612 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms