RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 RAC1P63000 192 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 SARNPP82979 210 aaKnown RBP8.66□□□□□ -1.02
CHD6-201ENST00000309279 UBXN1Q04323 297 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 ADCY1Q08828 1119 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 ACAP1Q15027 740 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 CCDC85BQ15834 202 aaPredicted RBP8.66□□□□□ -1.02
CHD6-201ENST00000309279 ZSCAN26Q16670 478 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 C21orf62-AS1Q17RA5 79 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 CFAP221Q4G0U5 840 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 TM4SF20Q53R12 229 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 KLHDC7AQ5VTJ3 777 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 NUGGCQ68CJ6 796 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 RNF19BQ6ZMZ0 732 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 RRAGAQ7L523 313 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 GAS2L3Q86XJ1 694 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 B3GALNT2Q8NCR0 500 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 KREMEN2Q8NCW0 462 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 RNF214Q8ND24 703 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 MAFAQ8NHW3 353 aaPredicted RBP8.66□□□□□ -1.02
CHD6-201ENST00000309279 MYCBPAPQ8TBZ2 947 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 FBF1Q8TES7 1133 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 FUBP3Q96I24 572 aaKnown RBP eCLIP8.66□□□□□ -1.02
CHD6-201ENST00000309279 TNIP3Q96KP6 325 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 KREMEN1Q96MU8 473 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 SYT15Q9BQS2 421 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 NT5C1AQ9BXI3 368 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 MAK16Q9BXY0 300 aaKnown RBP8.66□□□□□ -1.02
CHD6-201ENST00000309279 DPEP3Q9H4B8 488 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 UBE2TQ9NPD8 197 aaPredicted RBP8.66□□□□□ -1.02
CHD6-201ENST00000309279 CRTAC1Q9NQ79 661 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 TCF7L2Q9NQB0 619 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 TMLHEQ9NVH6 421 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 DZANK1Q9NVP4 752 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 HMGXB4Q9UGU5 601 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 PLAAQ9Y263 795 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 SIK3Q9Y2K2 1263 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 VCANP13611 3396 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 DOCK6Q96HP0 2047 aa8.66□□□□□ -1.02
CHD6-201ENST00000309279 A0A1W2PQC6 194 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 ZBTB24O43167 697 aaPredicted RBP8.65□□□□□ -1.02
CHD6-201ENST00000309279 TEX33O43247 280 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 TBX10O75333 385 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 B3GALNT1O75752 331 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 NOL4O94818 638 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 SEC24AO95486 1093 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 SERPINC1P01008 464 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 SPATA31D3P0C874 917 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 SRGAP2BP0DMP2 458 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 GZMAP12544 262 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 UCHL3P15374 230 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 HOXB8P17481 243 aaPredicted RBP8.65□□□□□ -1.02
CHD6-201ENST00000309279 DESP17661 470 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 CD58P19256 250 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 HOXA9P31269 272 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 CD86P42081 329 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 CCT5P48643 541 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 MAN2A2P49641 1150 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 RAD23BP54727 409 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 MFAP3P55082 362 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 ARPP19P56211 112 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 DLX2Q07687 328 aaPredicted RBP8.65□□□□□ -1.02
CHD6-201ENST00000309279 TCEA2Q15560 299 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 SLC39A12Q504Y0 691 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 ANKRD39Q53RE8 183 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 AP1ARQ63HQ0 302 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 ANKRD54Q6NXT1 300 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 SYCE2Q6PIF2 218 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 SPATA31D4Q6ZUB0 917 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 SDCCAG8Q86SQ7 713 aaPredicted RBP8.65□□□□□ -1.02
CHD6-201ENST00000309279 ATAD1Q8NBU5 361 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 NAXEQ8NCW5 288 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 CMASQ8NFW8 434 aaPredicted RBP8.65□□□□□ -1.02
CHD6-201ENST00000309279 SPPL2BQ8TCT7 592 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 KAT5Q92993 513 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 PCED1BQ96HM7 432 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 SEC16BQ96JE7 1060 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 MSLNLQ96KJ4 702 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 PGLYRP2Q96PD5 576 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 TWNKQ96RR1 684 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 NAA15Q9BXJ9 866 aaKnown RBP8.65□□□□□ -1.02
CHD6-201ENST00000309279 ELOVL4Q9GZR5 314 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 CRISPLD1Q9H336 500 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 CAAP1Q9H8G2 361 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 ABCB6Q9NP58 842 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 MAN1C1Q9NR34 630 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 CLDND1Q9NY35 253 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 PPARGC1AQ9UBK2 798 aaKnown RBP8.65□□□□□ -1.02
CHD6-201ENST00000309279 GGT7Q9UJ14 662 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 ZNF180Q9UJW8 692 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 COG5Q9UP83 839 aa8.65□□□□□ -1.02
CHD6-201ENST00000309279 LUC7L2Q9Y383 392 aaKnown RBP8.65□□□□□ -1.02
CHD6-201ENST00000309279 A0A0C4DFX4 3053 aa8.65□□□□□ -1.03
CHD6-201ENST00000309279 RNF225M0QZC1 329 aaPredicted RBP8.65□□□□□ -1.03
CHD6-201ENST00000309279 TIPRLO75663 272 aa8.65□□□□□ -1.03
CHD6-201ENST00000309279 POU2F2P09086 479 aa8.65□□□□□ -1.03
CHD6-201ENST00000309279 ELF1P32519 619 aa8.65□□□□□ -1.03
CHD6-201ENST00000309279 TUFMP49411 452 aaKnown RBP8.65□□□□□ -1.03
CHD6-201ENST00000309279 LRRC74AQ0VAA2 488 aa8.65□□□□□ -1.03
CHD6-201ENST00000309279 DUSP4Q13115 394 aa8.65□□□□□ -1.03
CHD6-201ENST00000309279 SYCP1Q15431 976 aa8.65□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms