RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 ZNF189O75820 626 aaPredicted RBP13.47□□□□□ -0.25
TRIM35-201ENST00000305364 SERPINE1P05121 402 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 THRAP10827 490 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 XIAPP98170 497 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 MYBPC3Q14896 1274 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 VWA5B1Q5TIE3 1220 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 DRICH1Q6PGQ1 229 aaPredicted RBP13.47□□□□□ -0.25
TRIM35-201ENST00000305364 CDAN1Q8IWY9 1227 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 ZBTB45Q96K62 511 aaPredicted RBP13.47□□□□□ -0.25
TRIM35-201ENST00000305364 USP18Q9UMW8 372 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 TTLL3Q9Y4R7 772 aa13.47□□□□□ -0.25
TRIM35-201ENST00000305364 CNTNAP4Q9C0A0 1308 aa13.46□□□□□ -0.25
TRIM35-201ENST00000305364 APOC4-APOC2K7ER74 178 aa13.46□□□□□ -0.25
TRIM35-201ENST00000305364 TRMUO75648 421 aaKnown RBP13.46□□□□□ -0.25
TRIM35-201ENST00000305364 APOC2P02655 101 aa13.46□□□□□ -0.25
TRIM35-201ENST00000305364 CYP1A1P04798 512 aaPredicted RBP13.46□□□□□ -0.25
TRIM35-201ENST00000305364 HSPA13P48723 471 aa13.46□□□□□ -0.25
TRIM35-201ENST00000305364 NR1H2P55055 460 aa13.46□□□□□ -0.25
TRIM35-201ENST00000305364 ADRM1Q16186 407 aa13.46□□□□□ -0.25
TRIM35-201ENST00000305364 BBS12Q6ZW61 710 aa13.46□□□□□ -0.25
TRIM35-201ENST00000305364 SNX32Q86XE0 403 aa13.46□□□□□ -0.25
TRIM35-201ENST00000305364 ZNF668Q96K58 619 aaPredicted RBP13.46□□□□□ -0.25
TRIM35-201ENST00000305364 MRPS26Q9BYN8 205 aaKnown RBP13.46□□□□□ -0.25
TRIM35-201ENST00000305364 PAIP1Q9H074 479 aaKnown RBP13.46□□□□□ -0.25
TRIM35-201ENST00000305364 UPF3AQ9H1J1 476 aaKnown RBP13.46□□□□□ -0.25
TRIM35-201ENST00000305364 DHX35Q9H5Z1 703 aaKnown RBP13.46□□□□□ -0.25
TRIM35-201ENST00000305364 CISHQ9NSE2 258 aa13.46□□□□□ -0.25
TRIM35-201ENST00000305364 PLA2G4CQ9UP65 541 aa13.46□□□□□ -0.25
TRIM35-201ENST00000305364 DMTF1Q9Y222 760 aa13.46□□□□□ -0.25
TRIM35-201ENST00000305364 SSX2IPQ9Y2D8 614 aa13.46□□□□□ -0.25
TRIM35-201ENST00000305364 TDRKHQ9Y2W6 561 aaKnown RBP13.46□□□□□ -0.25
TRIM35-201ENST00000305364 PCDHAC2Q9Y5I4 1007 aa13.46□□□□□ -0.25
TRIM35-201ENST00000305364 DCCP43146 1447 aa13.46□□□□□ -0.25
TRIM35-201ENST00000305364 NFIBO00712 420 aa13.46□□□□□ -0.25
TRIM35-201ENST00000305364 SIN3BO75182 1162 aa13.46□□□□□ -0.25
TRIM35-201ENST00000305364 DUOXA2Q1HG44 320 aa13.46□□□□□ -0.25
TRIM35-201ENST00000305364 CCDC92Q53HC0 331 aaPredicted RBP13.46□□□□□ -0.25
TRIM35-201ENST00000305364 FAM47CQ5HY64 1035 aa13.46□□□□□ -0.25
TRIM35-201ENST00000305364 KLHDC10Q6PID8 442 aa13.46□□□□□ -0.25
TRIM35-201ENST00000305364 PATL1Q86TB9 770 aaKnown RBP13.46□□□□□ -0.25
TRIM35-201ENST00000305364 C4orf19Q8IY42 314 aa13.46□□□□□ -0.25
TRIM35-201ENST00000305364 KYQ8NBH2 561 aa13.46□□□□□ -0.25
TRIM35-201ENST00000305364 ZSCAN18Q8TBC5 510 aaPredicted RBP13.46□□□□□ -0.25
TRIM35-201ENST00000305364 SEMA6AQ9H2E6 1030 aa13.46□□□□□ -0.25
TRIM35-201ENST00000305364 COQ4Q9Y3A0 265 aa13.46□□□□□ -0.25
TRIM35-201ENST00000305364 NUB1Q9Y5A7 615 aa13.46□□□□□ -0.25
TRIM35-201ENST00000305364 SNX13Q9Y5W8 968 aa13.46□□□□□ -0.25
TRIM35-201ENST00000305364 C10orf71Q711Q0 1435 aa13.46□□□□□ -0.26
TRIM35-201ENST00000305364 A0A1B0GUL6 1792 aa13.46□□□□□ -0.26
TRIM35-201ENST00000305364 ZNF862O60290 1169 aa13.46□□□□□ -0.26
TRIM35-201ENST00000305364 COX4I1P13073 169 aa13.46□□□□□ -0.26
TRIM35-201ENST00000305364 MMP8P22894 467 aa13.46□□□□□ -0.26
TRIM35-201ENST00000305364 MMRN1Q13201 1228 aa13.46□□□□□ -0.26
TRIM35-201ENST00000305364 ZACNQ401N2 412 aa13.46□□□□□ -0.26
TRIM35-201ENST00000305364 ZNF554Q86TJ5 538 aa13.46□□□□□ -0.26
TRIM35-201ENST00000305364 MFSD14AQ96MC6 490 aa13.46□□□□□ -0.26
TRIM35-201ENST00000305364 TMEM79Q9BSE2 394 aa13.46□□□□□ -0.26
TRIM35-201ENST00000305364 FRMD8Q9BZ67 464 aaPredicted RBP13.46□□□□□ -0.26
TRIM35-201ENST00000305364 ZNF408Q9H9D4 720 aa13.46□□□□□ -0.26
TRIM35-201ENST00000305364 RRN3Q9NYV6 651 aa13.46□□□□□ -0.26
TRIM35-201ENST00000305364 PHF24Q9UPV7 400 aa13.46□□□□□ -0.26
TRIM35-201ENST00000305364 ATP5BP06576 529 aaKnown RBP13.45□□□□□ -0.26
TRIM35-201ENST00000305364 GRK2P25098 689 aa13.45□□□□□ -0.26
TRIM35-201ENST00000305364 TMED10P49755 219 aaKnown RBP13.45□□□□□ -0.26
TRIM35-201ENST00000305364 C6orf52Q5T4I8 152 aa13.45□□□□□ -0.26
TRIM35-201ENST00000305364 CDHR3Q6ZTQ4 885 aa13.45□□□□□ -0.26
TRIM35-201ENST00000305364 AMIGO2Q86SJ2 522 aa13.45□□□□□ -0.26
TRIM35-201ENST00000305364 TAAR1Q96RJ0 339 aa13.45□□□□□ -0.26
TRIM35-201ENST00000305364 ZNF341Q9BYN7 854 aa13.45□□□□□ -0.26
TRIM35-201ENST00000305364 NIF3L1Q9GZT8 377 aa13.45□□□□□ -0.26
TRIM35-201ENST00000305364 RNPEPQ9H4A4 650 aa13.45□□□□□ -0.26
TRIM35-201ENST00000305364 KCNK13Q9HB14 408 aa13.45□□□□□ -0.26
TRIM35-201ENST00000305364 FETUBQ9UGM5 382 aa13.45□□□□□ -0.26
TRIM35-201ENST00000305364 FBXO40Q9UH90 709 aa13.45□□□□□ -0.26
TRIM35-201ENST00000305364 CD48P09326 243 aa13.45□□□□□ -0.26
TRIM35-201ENST00000305364 CCDC166P0CW27 439 aa13.45□□□□□ -0.26
TRIM35-201ENST00000305364 IMPDH2P12268 514 aa13.45□□□□□ -0.26
TRIM35-201ENST00000305364 GYS1P13807 737 aa13.45□□□□□ -0.26
TRIM35-201ENST00000305364 MIPP30301 263 aa13.45□□□□□ -0.26
TRIM35-201ENST00000305364 MYL6P60660 151 aa13.45□□□□□ -0.26
TRIM35-201ENST00000305364 SFSWAPQ12872 951 aaKnown RBP13.45□□□□□ -0.26
TRIM35-201ENST00000305364 UGCGQ16739 394 aa13.45□□□□□ -0.26
TRIM35-201ENST00000305364 ANGEL2Q5VTE6 544 aaKnown RBP13.45□□□□□ -0.26
TRIM35-201ENST00000305364 DCAF15Q66K64 600 aa13.45□□□□□ -0.26
TRIM35-201ENST00000305364 CLVS1Q8IUQ0 354 aaPredicted RBP13.45□□□□□ -0.26
TRIM35-201ENST00000305364 ZNF786Q8N393 782 aa13.45□□□□□ -0.26
TRIM35-201ENST00000305364 FBXW8Q8N3Y1 598 aa13.45□□□□□ -0.26
TRIM35-201ENST00000305364 NAT8LQ8N9F0 302 aa13.45□□□□□ -0.26
TRIM35-201ENST00000305364 PDZD8Q8NEN9 1154 aa13.45□□□□□ -0.26
TRIM35-201ENST00000305364 MTMR12Q9C0I1 747 aa13.45□□□□□ -0.26
TRIM35-201ENST00000305364 AGO4Q9HCK5 861 aaKnown RBP13.45□□□□□ -0.26
TRIM35-201ENST00000305364 CYLDQ9NQC7 956 aa13.45□□□□□ -0.26
TRIM35-201ENST00000305364 FEM1BQ9UK73 627 aa13.45□□□□□ -0.26
TRIM35-201ENST00000305364 PSMD13Q9UNM6 376 aa13.45□□□□□ -0.26
TRIM35-201ENST00000305364 CPA3P15088 417 aa13.45□□□□□ -0.26
TRIM35-201ENST00000305364 RBL1P28749 1068 aa13.45□□□□□ -0.26
TRIM35-201ENST00000305364 MAP3K10Q02779 954 aa13.45□□□□□ -0.26
TRIM35-201ENST00000305364 CDKL3Q8IVW4 592 aaPredicted RBP13.45□□□□□ -0.26
TRIM35-201ENST00000305364 ZBTB8OSQ8IWT0 167 aa13.45□□□□□ -0.26
TRIM35-201ENST00000305364 AFAP1L2Q8N4X5 818 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms