RNA–Protein interactions for RNA: ENST00000302538.9

ABR-202, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABR, Length 5,289 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-202ENST00000302538 FAM110CQ1W6H9 321 aa13.46□□□□□ -0.26
ABR-202ENST00000302538 SERPINA13PQ6UXR4 307 aa13.46□□□□□ -0.26
ABR-202ENST00000302538 OTOP2Q7RTS6 562 aa13.46□□□□□ -0.26
ABR-202ENST00000302538 KRT78Q8N1N4 520 aa13.46□□□□□ -0.26
ABR-202ENST00000302538 TMEM159Q96B96 161 aa13.46□□□□□ -0.26
ABR-202ENST00000302538 USP18Q9UMW8 372 aa13.46□□□□□ -0.26
ABR-202ENST00000302538 EVPLLA8MZ36 301 aa13.46□□□□□ -0.26
ABR-202ENST00000302538 BTBD19C9JJ37 291 aa13.46□□□□□ -0.26
ABR-202ENST00000302538 PSTPIP1O43586 416 aa13.46□□□□□ -0.26
ABR-202ENST00000302538 LSM8O95777 96 aaKnown RBP13.46□□□□□ -0.26
ABR-202ENST00000302538 SH3BGRP55822 239 aaPredicted RBP13.46□□□□□ -0.26
ABR-202ENST00000302538 HDAC4P56524 1084 aa13.46□□□□□ -0.26
ABR-202ENST00000302538 FLOT2Q14254 428 aa13.46□□□□□ -0.26
ABR-202ENST00000302538 IFNEQ86WN2 208 aa13.46□□□□□ -0.26
ABR-202ENST00000302538 ANKS1AQ92625 1134 aa13.46□□□□□ -0.26
ABR-202ENST00000302538 LPPQ93052 612 aa13.46□□□□□ -0.26
ABR-202ENST00000302538 ZNF556Q9HAH1 456 aa13.46□□□□□ -0.26
ABR-202ENST00000302538 NUDT5Q9UKK9 219 aa13.46□□□□□ -0.26
ABR-202ENST00000302538 ZNF541Q9H0D2 1346 aa13.46□□□□□ -0.26
ABR-202ENST00000302538 MEI4A8MW99 385 aa13.45□□□□□ -0.26
ABR-202ENST00000302538 SCAMP3O14828 347 aaKnown RBP13.45□□□□□ -0.26
ABR-202ENST00000302538 SOX11P35716 441 aa13.45□□□□□ -0.26
ABR-202ENST00000302538 ANXA11P50995 505 aaKnown RBP13.45□□□□□ -0.26
ABR-202ENST00000302538 BCL2L1Q07817 233 aa13.45□□□□□ -0.26
ABR-202ENST00000302538 AGAP9Q5VTM2 703 aa13.45□□□□□ -0.26
ABR-202ENST00000302538 OTOP1Q7RTM1 612 aa13.45□□□□□ -0.26
ABR-202ENST00000302538 KLRG1Q96E93 195 aa13.45□□□□□ -0.26
ABR-202ENST00000302538 C17orf80Q9BSJ5 609 aa13.45□□□□□ -0.26
ABR-202ENST00000302538 MARCH2Q9P0N8 246 aa13.45□□□□□ -0.26
ABR-202ENST00000302538 ZMYND8Q9ULU4 1186 aaPredicted RBP13.45□□□□□ -0.26
ABR-202ENST00000302538 GLP2RO95838 553 aa13.45□□□□□ -0.26
ABR-202ENST00000302538 GLUD1P00367 558 aa13.45□□□□□ -0.26
ABR-202ENST00000302538 KCNJ1P48048 391 aa13.45□□□□□ -0.26
ABR-202ENST00000302538 PRIM2P49643 509 aa13.45□□□□□ -0.26
ABR-202ENST00000302538 HECTD3Q5T447 861 aa13.45□□□□□ -0.26
ABR-202ENST00000302538 MROH9Q5TGP6 573 aa13.45□□□□□ -0.26
ABR-202ENST00000302538 C4orf33Q8N1A6 199 aa13.45□□□□□ -0.26
ABR-202ENST00000302538 ADAM32Q8TC27 787 aa13.45□□□□□ -0.26
ABR-202ENST00000302538 ZDHHC6Q9H6R6 413 aa13.45□□□□□ -0.26
ABR-202ENST00000302538 VPS51Q9UID3 782 aa13.45□□□□□ -0.26
ABR-202ENST00000302538 ST3GAL5Q9UNP4 418 aa13.45□□□□□ -0.26
ABR-202ENST00000302538 A0A1W2PQJ5 194 aa13.45□□□□□ -0.26
ABR-202ENST00000302538 SLITRK3O94933 977 aa13.45□□□□□ -0.26
ABR-202ENST00000302538 DMC1Q14565 340 aa13.45□□□□□ -0.26
ABR-202ENST00000302538 PSMD5Q16401 504 aa13.45□□□□□ -0.26
ABR-202ENST00000302538 MRPL42Q9Y6G3 142 aaKnown RBP13.45□□□□□ -0.26
ABR-202ENST00000302538 ZNF185O15231 689 aa13.45□□□□□ -0.26
ABR-202ENST00000302538 PLA2G6O60733 806 aa13.45□□□□□ -0.26
ABR-202ENST00000302538 GGCXP38435 758 aa13.45□□□□□ -0.26
ABR-202ENST00000302538 MAGEA4P43358 317 aa13.45□□□□□ -0.26
ABR-202ENST00000302538 FXR1P51114 621 aaKnown RBP eCLIP13.45□□□□□ -0.26
ABR-202ENST00000302538 XRCC4Q13426 336 aa13.45□□□□□ -0.26
ABR-202ENST00000302538 SETMARQ53H47 684 aaPredicted RBP13.45□□□□□ -0.26
ABR-202ENST00000302538 TTC39BQ5VTQ0 682 aaPredicted RBP13.45□□□□□ -0.26
ABR-202ENST00000302538 HOMEZQ8IX15 550 aa13.45□□□□□ -0.26
ABR-202ENST00000302538 AGXT2Q9BYV1 514 aa13.45□□□□□ -0.26
ABR-202ENST00000302538 UBP1Q9NZI7 540 aa13.45□□□□□ -0.26
ABR-202ENST00000302538 MARCOQ9UEW3 520 aaPredicted RBP13.45□□□□□ -0.26
ABR-202ENST00000302538 CDYLQ9Y232 598 aa13.45□□□□□ -0.26
ABR-202ENST00000302538 ITGA8P53708 1063 aa13.44□□□□□ -0.26
ABR-202ENST00000302538 POLR2LP62875 67 aaKnown RBP13.44□□□□□ -0.26
ABR-202ENST00000302538 HLA-DQA1Q5Y7H0 255 aa13.44□□□□□ -0.26
ABR-202ENST00000302538 PRUNE1Q86TP1 453 aa13.44□□□□□ -0.26
ABR-202ENST00000302538 VSIG10LQ86VR7 867 aa13.44□□□□□ -0.26
ABR-202ENST00000302538 CXorf40AQ8TE69 158 aa13.44□□□□□ -0.26
ABR-202ENST00000302538 PHF21AQ96BD5 680 aa13.44□□□□□ -0.26
ABR-202ENST00000302538 FAM161BQ96MY7 647 aa13.44□□□□□ -0.26
ABR-202ENST00000302538 FRMD8Q9BZ67 464 aaPredicted RBP13.44□□□□□ -0.26
ABR-202ENST00000302538 BRD9Q9H8M2 597 aa13.44□□□□□ -0.26
ABR-202ENST00000302538 TBC1D13Q9NVG8 400 aa13.44□□□□□ -0.26
ABR-202ENST00000302538 DRG1Q9Y295 367 aaKnown RBP13.44□□□□□ -0.26
ABR-202ENST00000302538 TBC1D12O60347 775 aa13.44□□□□□ -0.26
ABR-202ENST00000302538 USP17L7P0C7H9 530 aa13.44□□□□□ -0.26
ABR-202ENST00000302538 CCDC130P13994 396 aa13.44□□□□□ -0.26
ABR-202ENST00000302538 CTCFP49711 727 aaPredicted RBP13.44□□□□□ -0.26
ABR-202ENST00000302538 KCNK10P57789 538 aa13.44□□□□□ -0.26
ABR-202ENST00000302538 C11orf74Q86VG3 221 aa13.44□□□□□ -0.26
ABR-202ENST00000302538 KIAA0319LQ8IZA0 1049 aa13.44□□□□□ -0.26
ABR-202ENST00000302538 OSCP1Q8WVF1 389 aa13.44□□□□□ -0.26
ABR-202ENST00000302538 FAM162AQ96A26 154 aa13.44□□□□□ -0.26
ABR-202ENST00000302538 KLF6Q99612 283 aaPredicted RBP13.44□□□□□ -0.26
ABR-202ENST00000302538 SMG5Q9UPR3 1016 aaKnown RBP13.44□□□□□ -0.26
ABR-202ENST00000302538 ZBTB48P10074 688 aaPredicted RBP13.44□□□□□ -0.26
ABR-202ENST00000302538 MAPTP10636 758 aaKnown RBP13.44□□□□□ -0.26
ABR-202ENST00000302538 AMD1P17707 334 aa13.44□□□□□ -0.26
ABR-202ENST00000302538 LONRF1Q17RB8 773 aa13.44□□□□□ -0.26
ABR-202ENST00000302538 CCDC60Q8IWA6 550 aaPredicted RBP13.44□□□□□ -0.26
ABR-202ENST00000302538 FBXL16Q8N461 479 aa13.44□□□□□ -0.26
ABR-202ENST00000302538 FBXO22Q8NEZ5 403 aa13.44□□□□□ -0.26
ABR-202ENST00000302538 SERAC1Q96JX3 654 aa13.44□□□□□ -0.26
ABR-202ENST00000302538 SYTL2Q9HCH5 934 aa13.44□□□□□ -0.26
ABR-202ENST00000302538 EIF3LQ9Y262 564 aaKnown RBP13.44□□□□□ -0.26
ABR-202ENST00000302538 ATP5HO75947 161 aa13.44□□□□□ -0.26
ABR-202ENST00000302538 FAM107AO95990 144 aa13.44□□□□□ -0.26
ABR-202ENST00000302538 ITGB6P18564 788 aa13.44□□□□□ -0.26
ABR-202ENST00000302538 CACHD1Q5VU97 1274 aa13.44□□□□□ -0.26
ABR-202ENST00000302538 WSCD1Q658N2 575 aa13.44□□□□□ -0.26
ABR-202ENST00000302538 JAMLQ86YT9 394 aa13.44□□□□□ -0.26
ABR-202ENST00000302538 SLC44A2Q8IWA5 706 aaPredicted RBP13.44□□□□□ -0.26
ABR-202ENST00000302538 SYTL1Q8IYJ3 562 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms