RNA–Protein interactions for RNA: ENST00000299267.8

GABRB3-201, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 1 (best) BASIC

Gene GABRB3, Length 4,494 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-201ENST00000299267 RBL1P28749 1068 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 NDUFV1P49821 464 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 TRADDQ15628 312 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 LRRC52Q8N7C0 313 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 PDCD7Q8N8D1 485 aaKnown RBP10.54□□□□□ -0.72
GABRB3-201ENST00000299267 STMN2Q93045 179 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 SGF29Q96ES7 293 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 PWWP2AQ96N64 755 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 TRIM56Q9BRZ2 755 aaKnown RBP10.54□□□□□ -0.72
GABRB3-201ENST00000299267 FTHL17Q9BXU8 183 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 FBXO44Q9H4M3 255 aa10.54□□□□□ -0.72
GABRB3-201ENST00000299267 LOC102724159A0A0B4J2E5 919 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 CFAP69A5D8W1 941 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 FAM47DPA6NHR8 397 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 A8MX80 341 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 MSI1O43347 362 aaKnown RBP10.53□□□□□ -0.72
GABRB3-201ENST00000299267 TLL1O43897 1013 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 LGR5O75473 907 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 S100BP04271 92 aaPredicted RBP10.53□□□□□ -0.72
GABRB3-201ENST00000299267 HOXC6P09630 235 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 PAPOLAP51003 745 aaKnown RBP10.53□□□□□ -0.72
GABRB3-201ENST00000299267 RAD23BP54727 409 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 GRIK3Q13003 919 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 PWP2Q15269 919 aaKnown RBP10.53□□□□□ -0.72
GABRB3-201ENST00000299267 DCLRE1AQ6PJP8 1040 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 TRIM67Q6ZTA4 783 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 FAM35AQ86V20 835 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 PPIL6Q8IXY8 311 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 ARHGAP18Q8N392 663 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 EPS8L3Q8TE67 593 aaKnown RBP10.53□□□□□ -0.72
GABRB3-201ENST00000299267 PAWRQ96IZ0 340 aaKnown RBP10.53□□□□□ -0.72
GABRB3-201ENST00000299267 TBCBQ99426 244 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 CORO1BQ9BR76 489 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 SNRNP25Q9BV90 132 aaKnown RBP10.53□□□□□ -0.72
GABRB3-201ENST00000299267 UNKQ9C0B0 810 aaKnown RBP10.53□□□□□ -0.72
GABRB3-201ENST00000299267 MRPL17Q9NRX2 175 aaKnown RBP10.53□□□□□ -0.72
GABRB3-201ENST00000299267 MARCOQ9UEW3 520 aaPredicted RBP10.53□□□□□ -0.72
GABRB3-201ENST00000299267 GOLGA8TH3BQL2 631 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 O00370 1275 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 EDIL3O43854 480 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 ASMTLO95671 621 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 HSPA4LO95757 839 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 F2P00734 622 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 CCNG2Q16589 344 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 ZNF467Q7Z7K2 595 aaPredicted RBP10.53□□□□□ -0.72
GABRB3-201ENST00000299267 LGI2Q8N0V4 545 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 TACO1Q9BSH4 297 aaKnown RBP10.53□□□□□ -0.72
GABRB3-201ENST00000299267 SIX2Q9NPC8 291 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 PCMTD2Q9NV79 361 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 CILPO75339 1184 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 RAB44Q7Z6P3 723 aaPredicted RBP10.53□□□□□ -0.72
GABRB3-201ENST00000299267 FBXO36Q8NEA4 188 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 WNT8BQ93098 351 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 DCLK3Q9C098 648 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 TTYH3Q9C0H2 523 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 DYRK4Q9NR20 520 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 PLK2Q9NYY3 685 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 CDH9Q9ULB4 789 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 COG5Q9UP83 839 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 SLC45A1Q9Y2W3 748 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 TLL2Q9Y6L7 1015 aa10.53□□□□□ -0.72
GABRB3-201ENST00000299267 KDELR1P24390 212 aa10.52□□□□□ -0.72
GABRB3-201ENST00000299267 RPL21P46778 160 aaKnown RBP10.52□□□□□ -0.72
GABRB3-201ENST00000299267 USP10Q14694 798 aaKnown RBP10.52□□□□□ -0.72
GABRB3-201ENST00000299267 PSMD5Q16401 504 aa10.52□□□□□ -0.72
GABRB3-201ENST00000299267 KLC3Q6P597 504 aa10.52□□□□□ -0.72
GABRB3-201ENST00000299267 FIBCD1Q8N539 461 aa10.52□□□□□ -0.72
GABRB3-201ENST00000299267 COLGALT1Q8NBJ5 622 aa10.52□□□□□ -0.72
GABRB3-201ENST00000299267 ARL8AQ96BM9 186 aa10.52□□□□□ -0.72
GABRB3-201ENST00000299267 TWNKQ96RR1 684 aa10.52□□□□□ -0.72
GABRB3-201ENST00000299267 GPR63Q9BZJ6 419 aa10.52□□□□□ -0.72
GABRB3-201ENST00000299267 CNTRLQ7Z7A1 2325 aa10.52□□□□□ -0.72
GABRB3-201ENST00000299267 SCN9AQ15858 1988 aa10.52□□□□□ -0.72
GABRB3-201ENST00000299267 CDH16O75309 829 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 MMP8P22894 467 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 KRT33BQ14525 404 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 POU6F1Q14863 301 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 ARHGAP15Q53QZ3 475 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 RAP1GAP2Q684P5 730 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 SYDE1Q6ZW31 735 aaPredicted RBP10.52□□□□□ -0.73
GABRB3-201ENST00000299267 C7orf61Q8IZ16 206 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 SLC4A11Q8NBS3 891 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 CRYGNQ8WXF5 182 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 CINPQ9BW66 212 aaPredicted RBP10.52□□□□□ -0.73
GABRB3-201ENST00000299267 RHOBTB2Q9BYZ6 727 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 CNOT10Q9H9A5 744 aaKnown RBP10.52□□□□□ -0.73
GABRB3-201ENST00000299267 GTSE1Q9NYZ3 720 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 FLRT1Q9NZU1 646 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 ADAMTS5Q9UNA0 930 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 MYO5AQ9Y4I1 1855 aaKnown RBP10.52□□□□□ -0.73
GABRB3-201ENST00000299267 RHOCP08134 193 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 GOT1P17174 413 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 RPL9P32969 192 aaKnown RBP10.52□□□□□ -0.73
GABRB3-201ENST00000299267 NOS2P35228 1153 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 TUFMP49411 452 aaKnown RBP10.52□□□□□ -0.73
GABRB3-201ENST00000299267 VCPP55072 806 aaKnown RBP10.52□□□□□ -0.73
GABRB3-201ENST00000299267 FOXD4Q12950 439 aaPredicted RBP10.52□□□□□ -0.73
GABRB3-201ENST00000299267 STAT4Q14765 748 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 MTFR1Q15390 333 aa10.52□□□□□ -0.73
GABRB3-201ENST00000299267 MMEL1Q495T6 779 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms