RNA–Protein interactions for RNA: ENST00000260810.9

TOPBP1-201, Transcript of DNA topoisomerase II binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOPBP1, Length 5,378 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-201ENST00000260810 DDX23Q9BUQ8 820 aaKnown RBP5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 GPATCH2LQ9NWQ4 482 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 ARHGEF38Q9NXL2 777 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 EPG5Q9HCE0 2579 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 KPNA7A9QM74 516 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 TRAFD1O14545 582 aaPredicted RBP5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 GZMAP12544 262 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 SELPP16109 830 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 HDCP19113 662 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 KCNJ11Q14654 390 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 PLA2G4EQ3MJ16 856 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 PDE12Q6L8Q7 609 aaKnown RBP5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 HS6ST3Q8IZP7 471 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 MCPH1Q8NEM0 835 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 CPT1BQ92523 772 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 MYRFLQ96LU7 910 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 TBCBQ99426 244 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 SLC30A3Q99726 388 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 IMPG2Q9BZV3 1241 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 SMG9Q9H0W8 520 aaKnown RBP5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 FAM49BQ9NUQ9 324 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 FBXO10Q9UK96 956 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 IRAK3Q9Y616 596 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 ZCWPW2A0A1B0GU75 182 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 MAFKO60675 156 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 TIMP1P01033 207 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 CTSLP07711 333 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 DAOAP59103 153 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 PTPN11Q06124 597 aaPredicted RBP5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 PTPRCAPQ14761 206 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 PTPN14Q15678 1187 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 CNGA2Q16280 664 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 TRMT10BQ6PF06 316 aaKnown RBP5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 SCARA5Q6ZMJ2 495 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 PYM1Q9BRP8 204 aaKnown RBP5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 AICDAQ9GZX7 198 aa5.94□□□□□ -1.46
TOPBP1-201ENST00000260810 TMEM229AB2RXF0 380 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 DPYSL4O14531 572 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 SERPING1P05155 500 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 MIPP30301 263 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 PTPN7P35236 360 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 NIPAL4Q0D2K0 466 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 CFAP221Q4G0U5 840 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 KHDC1Q4VXA5 237 aaKnown RBP5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 TAF3Q5VWG9 929 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 NAA35Q5VZE5 725 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 TXNDC11Q6PKC3 985 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 B3GALNT2Q8NCR0 500 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 ACTRT1Q8TDG2 376 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 SIGLEC10Q96LC7 697 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 TIPINQ9BVW5 301 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 CARD6Q9BX69 1037 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 DPP3Q9NY33 737 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 A0A0D9SEW6 157 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 N4BP3O15049 544 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 FAM155BO75949 473 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 ATN1P54259 1190 aaPredicted RBP5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 SCAPQ12770 1279 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 DOC2BQ14184 412 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 RNASEH2BQ5TBB1 312 aaKnown RBP5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 LRRC8DQ7L1W4 858 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 DLG3Q92796 817 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 C1QTNF1Q9BXJ1 281 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 ARHGEF35A5YM69 484 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 C2orf71A6NGG8 1288 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 TEX28O15482 410 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 ATXN1LP0C7T5 689 aaKnown RBP5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 GJA1P17302 382 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 EPORP19235 508 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 POLGP54098 1239 aaPredicted RBP5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 ARF5P84085 180 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 PLCB3Q01970 1234 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 DGKKQ5KSL6 1271 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 CC2D1AQ6P1N0 951 aaPredicted RBP5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 CIR1Q86X95 450 aaPredicted RBP5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 MAML2Q8IZL2 1156 aaPredicted RBP5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 DEPDC1BQ8WUY9 529 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 SPOCK2Q92563 424 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 DRC1Q96MC2 740 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 IFIH1Q9BYX4 1025 aaKnown RBP5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 GLT8D2Q9H1C3 349 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 RXFP1Q9HBX9 757 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 SQORQ9Y6N5 450 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 P4HA2O15460 535 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 FZD6O60353 706 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 MXD4Q14582 209 aaPredicted RBP5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 BMS1Q14692 1282 aaKnown RBP5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 DCAF17Q5H9S7 520 aaPredicted RBP5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 ALG1LQ6GMV1 187 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 ACCSQ96QU6 501 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 MSTO1Q9BUK6 570 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 ASB7Q9H672 318 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 AMACRQ9UHK6 382 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 ABT1Q9ULW3 272 aaKnown RBP5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 MPDZO75970 2070 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 SCN3AQ9NY46 2000 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 CLDN3O15551 220 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 DHX9Q08211 1270 aaKnown RBP5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 ARHGAP44Q17R89 818 aa5.93□□□□□ -1.46
TOPBP1-201ENST00000260810 AAK1Q2M2I8 961 aa5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms