RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 RPF1Q9H9Y2 349 aaKnown RBP19.66■□□□□ 0.74
SNX4-201ENST00000251775 VCX3AQ9NNX9 186 aa19.66■□□□□ 0.74
SNX4-201ENST00000251775 KCNK4Q9NYG8 393 aa19.66■□□□□ 0.74
SNX4-201ENST00000251775 TNFSF13BQ9Y275 285 aa19.66■□□□□ 0.74
SNX4-201ENST00000251775 IQANK1A0A1B0GTG1 560 aa19.65■□□□□ 0.74
SNX4-201ENST00000251775 KLF11O14901 512 aa19.65■□□□□ 0.74
SNX4-201ENST00000251775 BUD23O43709 281 aaKnown RBP19.65■□□□□ 0.74
SNX4-201ENST00000251775 CSDE1O75534 798 aaKnown RBP19.65■□□□□ 0.74
SNX4-201ENST00000251775 CIB2O75838 187 aa19.65■□□□□ 0.74
SNX4-201ENST00000251775 FAAP100Q0VG06 881 aa19.65■□□□□ 0.74
SNX4-201ENST00000251775 ZNF667Q5HYK9 610 aa19.65■□□□□ 0.74
SNX4-201ENST00000251775 KCNT1Q5JUK3 1230 aa19.65■□□□□ 0.74
SNX4-201ENST00000251775 SULF1Q8IWU6 871 aa19.65■□□□□ 0.74
SNX4-201ENST00000251775 SMC1BQ8NDV3 1235 aa19.65■□□□□ 0.74
SNX4-201ENST00000251775 PPP2R3CQ969Q6 453 aa19.65■□□□□ 0.74
SNX4-201ENST00000251775 HAPLN3Q96S86 360 aa19.65■□□□□ 0.74
SNX4-201ENST00000251775 CYTH2Q99418 400 aa19.65■□□□□ 0.74
SNX4-201ENST00000251775 MMP19Q99542 508 aa19.65■□□□□ 0.74
SNX4-201ENST00000251775 RNPEPQ9H4A4 650 aa19.65■□□□□ 0.74
SNX4-201ENST00000251775 SMARCAD1Q9H4L7 1026 aa19.65■□□□□ 0.74
SNX4-201ENST00000251775 HMGXB4Q9UGU5 601 aa19.65■□□□□ 0.74
SNX4-201ENST00000251775 BAG2O95816 211 aa19.65■□□□□ 0.74
SNX4-201ENST00000251775 TXNP10599 105 aaKnown RBP19.65■□□□□ 0.74
SNX4-201ENST00000251775 PSMC1P62191 440 aaKnown RBP19.65■□□□□ 0.74
SNX4-201ENST00000251775 DYNLT1P63172 113 aa19.65■□□□□ 0.74
SNX4-201ENST00000251775 KCTD2Q14681 263 aa19.65■□□□□ 0.74
SNX4-201ENST00000251775 POLNQ7Z5Q5 900 aa19.65■□□□□ 0.74
SNX4-201ENST00000251775 IGDCC3Q8IVU1 814 aa19.65■□□□□ 0.74
SNX4-201ENST00000251775 EMC1Q8N766 993 aa19.65■□□□□ 0.74
SNX4-201ENST00000251775 DCPSQ96C86 337 aaKnown RBP19.65■□□□□ 0.74
SNX4-201ENST00000251775 CENPKQ9BS16 269 aa19.65■□□□□ 0.74
SNX4-201ENST00000251775 PPARGC1AQ9UBK2 798 aaKnown RBP19.65■□□□□ 0.74
SNX4-201ENST00000251775 SBF1O95248 1867 aa19.64■□□□□ 0.74
SNX4-201ENST00000251775 HBP1O60381 514 aa19.64■□□□□ 0.74
SNX4-201ENST00000251775 POLR2BP30876 1174 aaKnown RBP19.64■□□□□ 0.74
SNX4-201ENST00000251775 RPL22P35268 128 aaKnown RBP19.64■□□□□ 0.74
SNX4-201ENST00000251775 IREB2P48200 963 aaKnown RBP19.64■□□□□ 0.74
SNX4-201ENST00000251775 KDSRQ06136 332 aa19.64■□□□□ 0.74
SNX4-201ENST00000251775 LRRC23Q53EV4 343 aaPredicted RBP19.64■□□□□ 0.74
SNX4-201ENST00000251775 C6orf163Q5TEZ5 329 aa19.64■□□□□ 0.74
SNX4-201ENST00000251775 ERO1BQ86YB8 467 aa19.64■□□□□ 0.74
SNX4-201ENST00000251775 EBF3Q9H4W6 596 aa19.64■□□□□ 0.74
SNX4-201ENST00000251775 SMYD3Q9H7B4 428 aa19.64■□□□□ 0.74
SNX4-201ENST00000251775 AGTPBP1Q9UPW5 1226 aa19.64■□□□□ 0.74
SNX4-201ENST00000251775 CHMP2BQ9UQN3 213 aa19.64■□□□□ 0.74
SNX4-201ENST00000251775 DCAF8L1A6NGE4 600 aa19.64■□□□□ 0.73
SNX4-201ENST00000251775 LACTBL1A8MY62 500 aa19.64■□□□□ 0.73
SNX4-201ENST00000251775 ERBB2P04626 1255 aa19.64■□□□□ 0.73
SNX4-201ENST00000251775 IGBP1P78318 339 aa19.64■□□□□ 0.73
SNX4-201ENST00000251775 WDR78Q5VTH9 848 aa19.64■□□□□ 0.73
SNX4-201ENST00000251775 ARMC3Q5W041 872 aa19.64■□□□□ 0.73
SNX4-201ENST00000251775 CDHR3Q6ZTQ4 885 aa19.64■□□□□ 0.73
SNX4-201ENST00000251775 RAPH1Q70E73 1250 aa19.64■□□□□ 0.73
SNX4-201ENST00000251775 MARK2Q7KZI7 788 aaKnown RBP19.64■□□□□ 0.73
SNX4-201ENST00000251775 SLC4A11Q8NBS3 891 aa19.64■□□□□ 0.73
SNX4-201ENST00000251775 ACTL9Q8TC94 416 aa19.64■□□□□ 0.73
SNX4-201ENST00000251775 ITFG2Q969R8 447 aa19.64■□□□□ 0.73
SNX4-201ENST00000251775 OPTNQ96CV9 577 aa19.64■□□□□ 0.73
SNX4-201ENST00000251775 IFT122Q9HBG6 1241 aa19.64■□□□□ 0.73
SNX4-201ENST00000251775 GPAMQ9HCL2 828 aa19.64■□□□□ 0.73
SNX4-201ENST00000251775 IL1RAPL1Q9NZN1 696 aa19.64■□□□□ 0.73
SNX4-201ENST00000251775 TAGLN3Q9UI15 199 aa19.64■□□□□ 0.73
SNX4-201ENST00000251775 SPECC1L-ADORA2AF8WAN1 911 aa19.63■□□□□ 0.73
SNX4-201ENST00000251775 PDLIM1O00151 329 aa19.63■□□□□ 0.73
SNX4-201ENST00000251775 MED7O43513 233 aa19.63■□□□□ 0.73
SNX4-201ENST00000251775 IL18RAPO95256 599 aa19.63■□□□□ 0.73
SNX4-201ENST00000251775 ITGB3P05106 788 aa19.63■□□□□ 0.73
SNX4-201ENST00000251775 SLC26A2P50443 739 aa19.63■□□□□ 0.73
SNX4-201ENST00000251775 OTUD4Q01804 1114 aaKnown RBP19.63■□□□□ 0.73
SNX4-201ENST00000251775 HNRNPDQ14103 355 aaKnown RBP19.63■□□□□ 0.73
SNX4-201ENST00000251775 TMCO4Q5TGY1 634 aa19.63■□□□□ 0.73
SNX4-201ENST00000251775 C1orf146Q5VVC0 180 aa19.63■□□□□ 0.73
SNX4-201ENST00000251775 JADE1Q6IE81 842 aa19.63■□□□□ 0.73
SNX4-201ENST00000251775 XYLT1Q86Y38 959 aa19.63■□□□□ 0.73
SNX4-201ENST00000251775 SLC25A41Q8N5S1 370 aa19.63■□□□□ 0.73
SNX4-201ENST00000251775 SLC44A1Q8WWI5 657 aa19.63■□□□□ 0.73
SNX4-201ENST00000251775 PPP1R16BQ96T49 567 aa19.63■□□□□ 0.73
SNX4-201ENST00000251775 ELOVL4Q9GZR5 314 aa19.63■□□□□ 0.73
SNX4-201ENST00000251775 CXCL11O14625 94 aa19.63■□□□□ 0.73
SNX4-201ENST00000251775 C22orf31O95567 290 aa19.63■□□□□ 0.73
SNX4-201ENST00000251775 STAG3L1P0CL83 205 aa19.63■□□□□ 0.73
SNX4-201ENST00000251775 ETS2P15036 469 aa19.63■□□□□ 0.73
SNX4-201ENST00000251775 RANBP1P43487 201 aa19.63■□□□□ 0.73
SNX4-201ENST00000251775 LSAMPQ13449 338 aa19.63■□□□□ 0.73
SNX4-201ENST00000251775 KBTBD12Q3ZCT8 623 aa19.63■□□□□ 0.73
SNX4-201ENST00000251775 PABPC1LQ4VXU2 614 aaKnown RBP19.63■□□□□ 0.73
SNX4-201ENST00000251775 CES4AQ5XG92 561 aa19.63■□□□□ 0.73
SNX4-201ENST00000251775 FAM43BQ6ZT52 329 aaPredicted RBP19.63■□□□□ 0.73
SNX4-201ENST00000251775 ACAD11Q709F0 780 aa19.63■□□□□ 0.73
SNX4-201ENST00000251775 PDIK1LQ8N165 341 aa19.63■□□□□ 0.73
SNX4-201ENST00000251775 CXorf38Q8TB03 319 aa19.63■□□□□ 0.73
SNX4-201ENST00000251775 MTBPQ96DY7 904 aa19.63■□□□□ 0.73
SNX4-201ENST00000251775 MECRQ9BV79 373 aa19.63■□□□□ 0.73
SNX4-201ENST00000251775 ADARB2Q9NS39 739 aaKnown RBP19.63■□□□□ 0.73
SNX4-201ENST00000251775 XPO7Q9UIA9 1087 aaKnown RBP19.63■□□□□ 0.73
SNX4-201ENST00000251775 COMMD3-BMI1R4GMX3 469 aa19.63■□□□□ 0.73
SNX4-201ENST00000251775 TCRBV9S1A1TA0A576 114 aa19.62■□□□□ 0.73
SNX4-201ENST00000251775 CST8O60676 142 aa19.62■□□□□ 0.73
SNX4-201ENST00000251775 CD48P09326 243 aa19.62■□□□□ 0.73
SNX4-201ENST00000251775 KDELR1P24390 212 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms