RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 RLN3Q8WXF3 142 aa17.81■□□□□ 0.44
SMN2-216ENST00000638794 JAKMIP2Q96AA8 810 aa17.81■□□□□ 0.44
SMN2-216ENST00000638794 HNRNPABQ99729 332 aaKnown RBP17.81■□□□□ 0.44
SMN2-216ENST00000638794 LSM14BQ9BX40 385 aaKnown RBP17.81■□□□□ 0.44
SMN2-216ENST00000638794 IMPG2Q9BZV3 1241 aa17.81■□□□□ 0.44
SMN2-216ENST00000638794 POLMQ9NP87 494 aaPredicted RBP17.81■□□□□ 0.44
SMN2-216ENST00000638794 OSER1Q9NX31 292 aa17.81■□□□□ 0.44
SMN2-216ENST00000638794 DEC1Q9P2X7 70 aa17.81■□□□□ 0.44
SMN2-216ENST00000638794 TBC1D3BA6NDS4 549 aa17.8■□□□□ 0.44
SMN2-216ENST00000638794 HHLA1C9JL84 531 aa17.8■□□□□ 0.44
SMN2-216ENST00000638794 TRIM24O15164 1050 aa17.8■□□□□ 0.44
SMN2-216ENST00000638794 GREM1O60565 184 aa17.8■□□□□ 0.44
SMN2-216ENST00000638794 DHPSP49366 369 aaPredicted RBP17.8■□□□□ 0.44
SMN2-216ENST00000638794 DPYDQ12882 1025 aa17.8■□□□□ 0.44
SMN2-216ENST00000638794 N4BP2L1Q5TBK1 243 aaPredicted RBP17.8■□□□□ 0.44
SMN2-216ENST00000638794 INTS8Q75QN2 995 aaKnown RBP17.8■□□□□ 0.44
SMN2-216ENST00000638794 CYP2U1Q7Z449 544 aa17.8■□□□□ 0.44
SMN2-216ENST00000638794 FRMD1Q8N878 549 aa17.8■□□□□ 0.44
SMN2-216ENST00000638794 TERB1Q8NA31 727 aa17.8■□□□□ 0.44
SMN2-216ENST00000638794 HMGB4Q8WW32 186 aa17.8■□□□□ 0.44
SMN2-216ENST00000638794 CCDC47Q96A33 483 aaKnown RBP17.8■□□□□ 0.44
SMN2-216ENST00000638794 CYFIP2Q96F07 1278 aa17.8■□□□□ 0.44
SMN2-216ENST00000638794 NT5C1AQ9BXI3 368 aa17.8■□□□□ 0.44
SMN2-216ENST00000638794 KLF16Q9BXK1 252 aaPredicted RBP17.8■□□□□ 0.44
SMN2-216ENST00000638794 MMRN2Q9H8L6 949 aa17.8■□□□□ 0.44
SMN2-216ENST00000638794 CYLDQ9NQC7 956 aa17.8■□□□□ 0.44
SMN2-216ENST00000638794 BCCIPQ9P287 314 aaKnown RBP eCLIP17.8■□□□□ 0.44
SMN2-216ENST00000638794 CIZ1Q9ULV3 898 aaPredicted RBP17.8■□□□□ 0.44
SMN2-216ENST00000638794 SCML2Q9UQR0 700 aa17.8■□□□□ 0.44
SMN2-216ENST00000638794 GON4LQ3T8J9 2241 aa17.8■□□□□ 0.44
SMN2-216ENST00000638794 CEP192Q8TEP8 1941 aa17.79■□□□□ 0.44
SMN2-216ENST00000638794 TCRBV21S2A2A0A5A6 115 aa17.79■□□□□ 0.44
SMN2-216ENST00000638794 C4orf47A7E2U8 309 aa17.79■□□□□ 0.44
SMN2-216ENST00000638794 PATE3B3GLJ2 98 aa17.79■□□□□ 0.44
SMN2-216ENST00000638794 KCNK5O95279 499 aa17.79■□□□□ 0.44
SMN2-216ENST00000638794 CD58P19256 250 aa17.79■□□□□ 0.44
SMN2-216ENST00000638794 TRIM21P19474 475 aaKnown RBP17.79■□□□□ 0.44
SMN2-216ENST00000638794 ACO1P21399 889 aaKnown RBP17.79■□□□□ 0.44
SMN2-216ENST00000638794 ATP5C1P36542 298 aaKnown RBP17.79■□□□□ 0.44
SMN2-216ENST00000638794 P2RY2P41231 377 aa17.79■□□□□ 0.44
SMN2-216ENST00000638794 PREPLQ4J6C6 727 aaPredicted RBP17.79■□□□□ 0.44
SMN2-216ENST00000638794 C10orf76Q5T2E6 689 aa17.79■□□□□ 0.44
SMN2-216ENST00000638794 HTR3DQ70Z44 454 aa17.79■□□□□ 0.44
SMN2-216ENST00000638794 FAM186BQ8IYM0 893 aa17.79■□□□□ 0.44
SMN2-216ENST00000638794 ZNF513Q8N8E2 541 aaPredicted RBP17.79■□□□□ 0.44
SMN2-216ENST00000638794 SPACA7Q96KW9 195 aa17.79■□□□□ 0.44
SMN2-216ENST00000638794 NIF3L1Q9GZT8 377 aa17.79■□□□□ 0.44
SMN2-216ENST00000638794 CYP3A43Q9HB55 503 aa17.79■□□□□ 0.44
SMN2-216ENST00000638794 NMUR1Q9HB89 426 aa17.79■□□□□ 0.44
SMN2-216ENST00000638794 HCN2Q9UL51 889 aa17.79■□□□□ 0.44
SMN2-216ENST00000638794 ZFHX4Q86UP3 3567 aa17.79■□□□□ 0.44
SMN2-216ENST00000638794 PI4KAP42356 2102 aa17.78■□□□□ 0.44
SMN2-216ENST00000638794 CEP295Q9C0D2 2601 aa17.78■□□□□ 0.44
SMN2-216ENST00000638794 USP24Q9UPU5 2620 aa17.78■□□□□ 0.44
SMN2-216ENST00000638794 A0A1W2PQH9 124 aa17.78■□□□□ 0.44
SMN2-216ENST00000638794 KHNYNO15037 678 aaKnown RBP17.78■□□□□ 0.44
SMN2-216ENST00000638794 MDM4O15151 490 aa17.78■□□□□ 0.44
SMN2-216ENST00000638794 CILPO75339 1184 aa17.78■□□□□ 0.44
SMN2-216ENST00000638794 KRT13P13646 458 aa17.78■□□□□ 0.44
SMN2-216ENST00000638794 PMLP29590 882 aa17.78■□□□□ 0.44
SMN2-216ENST00000638794 PSMC2P35998 433 aaKnown RBP17.78■□□□□ 0.44
SMN2-216ENST00000638794 MAP7D1Q3KQU3 841 aa17.78■□□□□ 0.44
SMN2-216ENST00000638794 KRBA2Q6ZNG9 492 aa17.78■□□□□ 0.44
SMN2-216ENST00000638794 TRMT11Q7Z4G4 463 aaKnown RBP17.78■□□□□ 0.44
SMN2-216ENST00000638794 GUF1Q8N442 669 aaKnown RBP17.78■□□□□ 0.44
SMN2-216ENST00000638794 KCNV2Q8TDN2 545 aa17.78■□□□□ 0.44
SMN2-216ENST00000638794 PIGKQ92643 395 aa17.78■□□□□ 0.44
SMN2-216ENST00000638794 GOLPH3LQ9H4A5 285 aa17.78■□□□□ 0.44
SMN2-216ENST00000638794 PNPLA8Q9NP80 782 aa17.78■□□□□ 0.44
SMN2-216ENST00000638794 MBD1Q9UIS9 605 aaPredicted RBP17.78■□□□□ 0.44
SMN2-216ENST00000638794 NUDT5Q9UKK9 219 aa17.78■□□□□ 0.44
SMN2-216ENST00000638794 PCDHA5Q9Y5H7 936 aa17.78■□□□□ 0.44
SMN2-216ENST00000638794 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.77■□□□□ 0.44
SMN2-216ENST00000638794 NEDD8-MDP1E9PL57 170 aa17.77■□□□□ 0.44
SMN2-216ENST00000638794 RPL13P26373 211 aaKnown RBP17.77■□□□□ 0.44
SMN2-216ENST00000638794 ENPEPQ07075 957 aa17.77■□□□□ 0.44
SMN2-216ENST00000638794 GOLGA8FQ08AF8 430 aa17.77■□□□□ 0.44
SMN2-216ENST00000638794 GOLGA8DPQ0D2H9 430 aa17.77■□□□□ 0.44
SMN2-216ENST00000638794 ADAM9Q13443 819 aa17.77■□□□□ 0.44
SMN2-216ENST00000638794 ZCWPW2Q504Y3 356 aa17.77■□□□□ 0.44
SMN2-216ENST00000638794 GRAMD4Q6IC98 578 aa17.77■□□□□ 0.44
SMN2-216ENST00000638794 PSAPL1Q6NUJ1 521 aa17.77■□□□□ 0.44
SMN2-216ENST00000638794 KLHDC10Q6PID8 442 aa17.77■□□□□ 0.44
SMN2-216ENST00000638794 TPGS1Q6ZTW0 290 aa17.77■□□□□ 0.44
SMN2-216ENST00000638794 NUDT18Q6ZVK8 323 aa17.77■□□□□ 0.44
SMN2-216ENST00000638794 ARMCX6Q7L4S7 300 aa17.77■□□□□ 0.44
SMN2-216ENST00000638794 LPCAT2Q7L5N7 544 aa17.77■□□□□ 0.44
SMN2-216ENST00000638794 MIB1Q86YT6 1006 aa17.77■□□□□ 0.44
SMN2-216ENST00000638794 TMEFF1Q8IYR6 380 aa17.77■□□□□ 0.44
SMN2-216ENST00000638794 PGBD3Q8N328 593 aa17.77■□□□□ 0.44
SMN2-216ENST00000638794 BBS2Q9BXC9 721 aa17.77■□□□□ 0.44
SMN2-216ENST00000638794 TMEM8AQ9HCN3 771 aa17.77■□□□□ 0.44
SMN2-216ENST00000638794 DNAJC17Q9NVM6 304 aaKnown RBP17.77■□□□□ 0.44
SMN2-216ENST00000638794 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.77■□□□□ 0.44
SMN2-216ENST00000638794 LSM7Q9UK45 103 aaKnown RBP17.77■□□□□ 0.44
SMN2-216ENST00000638794 ANGPTL2Q9UKU9 493 aa17.77■□□□□ 0.44
SMN2-216ENST00000638794 FRYQ5TBA9 3013 aa17.77■□□□□ 0.44
SMN2-216ENST00000638794 A0A1W2PQ27 194 aa17.76■□□□□ 0.43
SMN2-216ENST00000638794 A0A1W2PQ64 194 aa17.76■□□□□ 0.43
SMN2-216ENST00000638794 A0A1W2PQD8 194 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms