RNA–Protein interactions for RNA: ENST00000618944.4

TP53-223, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,404 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-223	ENST00000618944	CCDC130	P13994	396 aa		11.65	□□□□□ -0.55
TP53-223	ENST00000618944	HOXA11	P31270	313 aa	Predicted RBP	11.65	□□□□□ -0.55
TP53-223	ENST00000618944	YWHAZ	P63104	245 aa	Known RBP	11.65	□□□□□ -0.55
TP53-223	ENST00000618944	GBE1	Q04446	702 aa		11.65	□□□□□ -0.55
TP53-223	ENST00000618944	PDK2	Q15119	407 aa		11.65	□□□□□ -0.55
TP53-223	ENST00000618944	NLRP9	Q7RTR0	991 aa		11.65	□□□□□ -0.55
TP53-223	ENST00000618944	CCDC125	Q86Z20	511 aa		11.65	□□□□□ -0.55
TP53-223	ENST00000618944	SLC35F5	Q8WV83	523 aa		11.65	□□□□□ -0.55
TP53-223	ENST00000618944	ZNF408	Q9H9D4	720 aa		11.65	□□□□□ -0.55
TP53-223	ENST00000618944	UGT1A7	Q9HAW7	530 aa		11.65	□□□□□ -0.55
TP53-223	ENST00000618944	UGT1A10	Q9HAW8	530 aa		11.65	□□□□□ -0.55
TP53-223	ENST00000618944	UGT1A8	Q9HAW9	530 aa		11.65	□□□□□ -0.55
TP53-223	ENST00000618944	SSU72	Q9NP77	194 aa	Known RBP	11.65	□□□□□ -0.55
TP53-223	ENST00000618944	CYLD	Q9NQC7	956 aa		11.65	□□□□□ -0.55
TP53-223	ENST00000618944	TXLNG	Q9NUQ3	528 aa		11.65	□□□□□ -0.55
TP53-223	ENST00000618944	ETNK2	Q9NVF9	386 aa		11.65	□□□□□ -0.55
TP53-223	ENST00000618944	KLK14	Q9P0G3	267 aa		11.65	□□□□□ -0.55
TP53-223	ENST00000618944	HESX1	Q9UBX0	185 aa		11.65	□□□□□ -0.55
TP53-223	ENST00000618944	ZC3H7B	Q9UGR2	993 aa	Known RBP	11.65	□□□□□ -0.55
TP53-223	ENST00000618944	C2orf71	A6NGG8	1288 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	SMAP	O00193	183 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	CHAD	O15335	359 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	DCTN3	O75935	186 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	SNAI1	O95863	264 aa	Predicted RBP	11.64	□□□□□ -0.55
TP53-223	ENST00000618944	SMPD1	P17405	629 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	CYP2F1	P24903	491 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	LMO2	P25791	158 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	GRM5	P41594	1212 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	SLC10A2	Q12908	348 aa	Predicted RBP	11.64	□□□□□ -0.55
TP53-223	ENST00000618944	KYAT1	Q16773	422 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	PKDCC	Q504Y2	493 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	FYB2	Q5VWT5	728 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	TMEM110	Q86TL2	294 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	CAND1	Q86VP6	1230 aa	Known RBP	11.64	□□□□□ -0.55
TP53-223	ENST00000618944	NDRG1	Q92597	394 aa	Known RBP	11.64	□□□□□ -0.55
TP53-223	ENST00000618944	SLC10A4	Q96EP9	437 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	SLC4A5	Q9BY07	1137 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	SLC13A1	Q9BZW2	595 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	PHACTR1	Q9C0D0	580 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	MAD1L1	Q9Y6D9	718 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944		A0A0G2JMZ2	1700 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	11.64	□□□□□ -0.55
TP53-223	ENST00000618944	TRIM49D1	C9J1S8	452 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	TM9SF1	O15321	606 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	METTL18	O95568	372 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	BGN	P21810	368 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	GRIA1	P42261	906 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	SNAPC2	Q13487	334 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	BMPR2	Q13873	1038 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	SOWAHA	Q2M3V2	549 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	ZNF618	Q5T7W0	954 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	CDHR3	Q6ZTQ4	885 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	CATSPER4	Q7RTX7	472 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	DPP9	Q86TI2	863 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	MPP5	Q8N3R9	675 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	ALKBH8	Q96BT7	664 aa	Known RBP	11.64	□□□□□ -0.55
TP53-223	ENST00000618944	OSMR	Q99650	979 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	CXorf56	Q9H5V9	222 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	KANSL3	Q9P2N6	904 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	MCM8	Q9UJA3	840 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	ZFP69B	Q9UJL9	534 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	GJD2	Q9UKL4	321 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	MFHAS1	Q9Y4C4	1052 aa		11.64	□□□□□ -0.55
TP53-223	ENST00000618944	ANK1	P16157	1881 aa		11.63	□□□□□ -0.55
TP53-223	ENST00000618944	PDHX	O00330	501 aa		11.63	□□□□□ -0.55
TP53-223	ENST00000618944	TROVE2	P10155	538 aa	Known RBP eCLIP	11.63	□□□□□ -0.55
TP53-223	ENST00000618944	TGM2	P21980	687 aa		11.63	□□□□□ -0.55
TP53-223	ENST00000618944	SKIV2L2	P42285	1042 aa	Known RBP	11.63	□□□□□ -0.55
TP53-223	ENST00000618944	SLC9A4	Q6AI14	798 aa		11.63	□□□□□ -0.55
TP53-223	ENST00000618944	LONP2	Q86WA8	852 aa		11.63	□□□□□ -0.55
TP53-223	ENST00000618944	PYROXD2	Q8N2H3	581 aa		11.63	□□□□□ -0.55
TP53-223	ENST00000618944	GIMAP7	Q8NHV1	300 aa		11.63	□□□□□ -0.55
TP53-223	ENST00000618944	TACO1	Q9BSH4	297 aa	Known RBP	11.63	□□□□□ -0.55
TP53-223	ENST00000618944	TSSK1B	Q9BXA7	367 aa		11.63	□□□□□ -0.55
TP53-223	ENST00000618944	KLC2	Q9H0B6	622 aa		11.63	□□□□□ -0.55
TP53-223	ENST00000618944	VPS11	Q9H270	941 aa		11.63	□□□□□ -0.55
TP53-223	ENST00000618944	NXF3	Q9H4D5	531 aa	Known RBP	11.63	□□□□□ -0.55
TP53-223	ENST00000618944	NRDE2	Q9H7Z3	1164 aa		11.63	□□□□□ -0.55
TP53-223	ENST00000618944	PLAC1	Q9HBJ0	212 aa		11.63	□□□□□ -0.55
TP53-223	ENST00000618944	VTA1	Q9NP79	307 aa		11.63	□□□□□ -0.55
TP53-223	ENST00000618944	SMYD2	Q9NRG4	433 aa		11.63	□□□□□ -0.55
TP53-223	ENST00000618944	TTLL3	Q9Y4R7	772 aa		11.63	□□□□□ -0.55
TP53-223	ENST00000618944	ALAD	P13716	330 aa		11.62	□□□□□ -0.55
TP53-223	ENST00000618944	L1CAM	P32004	1257 aa		11.62	□□□□□ -0.55
TP53-223	ENST00000618944	SMAD1	Q15797	465 aa	Known RBP	11.62	□□□□□ -0.55
TP53-223	ENST00000618944	EP400NL	Q6ZTU2	488 aa		11.62	□□□□□ -0.55
TP53-223	ENST00000618944	SH2D5	Q6ZV89	423 aa		11.62	□□□□□ -0.55
TP53-223	ENST00000618944	SLC26A11	Q86WA9	606 aa		11.62	□□□□□ -0.55
TP53-223	ENST00000618944	SHCBP1	Q8NEM2	672 aa		11.62	□□□□□ -0.55
TP53-223	ENST00000618944	OR6J1	Q8NGC5	347 aa		11.62	□□□□□ -0.55
TP53-223	ENST00000618944	SLC7A6OS	Q96CW6	309 aa	Predicted RBP	11.62	□□□□□ -0.55
TP53-223	ENST00000618944	L3MBTL3	Q96JM7	780 aa	Predicted RBP	11.62	□□□□□ -0.55
TP53-223	ENST00000618944	MECR	Q9BV79	373 aa		11.62	□□□□□ -0.55
TP53-223	ENST00000618944	TRIM6	Q9C030	488 aa	Predicted RBP	11.62	□□□□□ -0.55
TP53-223	ENST00000618944	POPDC2	Q9HBU9	364 aa		11.62	□□□□□ -0.55
TP53-223	ENST00000618944	PIH1D1	Q9NWS0	290 aa	Known RBP	11.62	□□□□□ -0.55
TP53-223	ENST00000618944	HEY2	Q9UBP5	337 aa		11.62	□□□□□ -0.55
TP53-223	ENST00000618944	SYNJ2BP-COX16	A0A087WUM0	186 aa		11.62	□□□□□ -0.55
TP53-223	ENST00000618944	BCLAF3	A2AJT9	711 aa	Known RBP	11.62	□□□□□ -0.55
TP53-223	ENST00000618944		A6NJR5	290 aa		11.62	□□□□□ -0.55

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms