RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 ASS1P00966 412 aaKnown RBP20.03■□□□□ 0.8
CDX1-202ENST00000616154 TIE1P35590 1138 aa20.03■□□□□ 0.8
CDX1-202ENST00000616154 PSMC2P35998 433 aaKnown RBP20.03■□□□□ 0.8
CDX1-202ENST00000616154 VAMP7P51809 220 aa20.03■□□□□ 0.8
CDX1-202ENST00000616154 ETFBKMTQ8IXQ9 262 aa20.03■□□□□ 0.8
CDX1-202ENST00000616154 SMYD4Q8IYR2 804 aaPredicted RBP20.03■□□□□ 0.8
CDX1-202ENST00000616154 CRYBG2Q8N1P7 616 aa20.03■□□□□ 0.8
CDX1-202ENST00000616154 SMOQ99835 787 aa20.03■□□□□ 0.8
CDX1-202ENST00000616154 CSNK1G1Q9HCP0 422 aa20.03■□□□□ 0.8
CDX1-202ENST00000616154 POLMQ9NP87 494 aaPredicted RBP20.03■□□□□ 0.8
CDX1-202ENST00000616154 ANGPTL2Q9UKU9 493 aa20.03■□□□□ 0.8
CDX1-202ENST00000616154 CCDC130P13994 396 aa20.02■□□□□ 0.8
CDX1-202ENST00000616154 PRCPP42785 496 aa20.02■□□□□ 0.8
CDX1-202ENST00000616154 ADAM9Q13443 819 aa20.02■□□□□ 0.8
CDX1-202ENST00000616154 ST3GAL2Q16842 350 aa20.02■□□□□ 0.8
CDX1-202ENST00000616154 EMC10Q5UCC4 262 aa20.02■□□□□ 0.8
CDX1-202ENST00000616154 CYP2U1Q7Z449 544 aa20.02■□□□□ 0.8
CDX1-202ENST00000616154 UNC93AQ86WB7 457 aa20.02■□□□□ 0.8
CDX1-202ENST00000616154 TTC30AQ86WT1 665 aa20.02■□□□□ 0.8
CDX1-202ENST00000616154 BBS7Q8IWZ6 715 aa20.02■□□□□ 0.8
CDX1-202ENST00000616154 FAM186BQ8IYM0 893 aa20.02■□□□□ 0.8
CDX1-202ENST00000616154 SLC2A14Q8TDB8 520 aa20.02■□□□□ 0.8
CDX1-202ENST00000616154 WHAMMQ8TF30 809 aa20.02■□□□□ 0.8
CDX1-202ENST00000616154 FBXO44Q9H4M3 255 aa20.02■□□□□ 0.8
CDX1-202ENST00000616154 HMGXB4Q9UGU5 601 aa20.02■□□□□ 0.8
CDX1-202ENST00000616154 HOOK1Q9UJC3 728 aaKnown RBP20.02■□□□□ 0.8
CDX1-202ENST00000616154 PI4KAP42356 2102 aa20.02■□□□□ 0.8
CDX1-202ENST00000616154 CEP192Q8TEP8 1941 aa20.02■□□□□ 0.8
CDX1-202ENST00000616154 C4orf47A7E2U8 309 aa20.02■□□□□ 0.79
CDX1-202ENST00000616154 KHNYNO15037 678 aaKnown RBP20.02■□□□□ 0.79
CDX1-202ENST00000616154 ADAM23O75077 832 aa20.02■□□□□ 0.79
CDX1-202ENST00000616154 KRT37O76014 449 aa20.02■□□□□ 0.79
CDX1-202ENST00000616154 BEST1O76090 585 aa20.02■□□□□ 0.79
CDX1-202ENST00000616154 GTF2H1P32780 548 aa20.02■□□□□ 0.79
CDX1-202ENST00000616154 P2RY2P41231 377 aa20.02■□□□□ 0.79
CDX1-202ENST00000616154 ASPAP45381 313 aa20.02■□□□□ 0.79
CDX1-202ENST00000616154 NDST1P52848 882 aa20.02■□□□□ 0.79
CDX1-202ENST00000616154 SHC2P98077 582 aa20.02■□□□□ 0.79
CDX1-202ENST00000616154 ORC1Q13415 861 aa20.02■□□□□ 0.79
CDX1-202ENST00000616154 PREPLQ4J6C6 727 aaPredicted RBP20.02■□□□□ 0.79
CDX1-202ENST00000616154 BTBD8Q5XKL5 378 aa20.02■□□□□ 0.79
CDX1-202ENST00000616154 GPT2Q8TD30 523 aa20.02■□□□□ 0.79
CDX1-202ENST00000616154 KCNV2Q8TDN2 545 aa20.02■□□□□ 0.79
CDX1-202ENST00000616154 SMARCE1Q969G3 411 aa20.02■□□□□ 0.79
CDX1-202ENST00000616154 SPACA7Q96KW9 195 aa20.02■□□□□ 0.79
CDX1-202ENST00000616154 NACA2Q9H009 215 aa20.02■□□□□ 0.79
CDX1-202ENST00000616154 SPHK2Q9NRA0 654 aa20.02■□□□□ 0.79
CDX1-202ENST00000616154 GON4LQ3T8J9 2241 aa20.01■□□□□ 0.79
CDX1-202ENST00000616154 TLR5O60602 858 aa20.01■□□□□ 0.79
CDX1-202ENST00000616154 TULP3O75386 442 aa20.01■□□□□ 0.79
CDX1-202ENST00000616154 MBD3O95983 291 aa20.01■□□□□ 0.79
CDX1-202ENST00000616154 DHPSP49366 369 aaPredicted RBP20.01■□□□□ 0.79
CDX1-202ENST00000616154 PGFP49763 221 aa20.01■□□□□ 0.79
CDX1-202ENST00000616154 MAP3K7CLP57077 242 aa20.01■□□□□ 0.79
CDX1-202ENST00000616154 PPP3CAQ08209 521 aa20.01■□□□□ 0.79
CDX1-202ENST00000616154 FOXR2Q6PJQ5 311 aa20.01■□□□□ 0.79
CDX1-202ENST00000616154 WBP2Q969T9 261 aa20.01■□□□□ 0.79
CDX1-202ENST00000616154 TLR8Q9NR97 1041 aaKnown RBP20.01■□□□□ 0.79
CDX1-202ENST00000616154 DEC1Q9P2X7 70 aa20.01■□□□□ 0.79
CDX1-202ENST00000616154 TBC1D3BA6NDS4 549 aa20■□□□□ 0.79
CDX1-202ENST00000616154 HLA-DRAP01903 254 aa20■□□□□ 0.79
CDX1-202ENST00000616154 FAM200BP0CF97 657 aa20■□□□□ 0.79
CDX1-202ENST00000616154 KRT13P13646 458 aa20■□□□□ 0.79
CDX1-202ENST00000616154 PIK3CAP42336 1068 aa20■□□□□ 0.79
CDX1-202ENST00000616154 LRRC63Q05C16 580 aa20■□□□□ 0.79
CDX1-202ENST00000616154 INCA1Q0VD86 236 aa20■□□□□ 0.79
CDX1-202ENST00000616154 MAP7D1Q3KQU3 841 aa20■□□□□ 0.79
CDX1-202ENST00000616154 DAB2IPQ5VWQ8 1189 aa20■□□□□ 0.79
CDX1-202ENST00000616154 SPOPLQ6IQ16 392 aa20■□□□□ 0.79
CDX1-202ENST00000616154 PSAPL1Q6NUJ1 521 aa20■□□□□ 0.79
CDX1-202ENST00000616154 LPCAT2Q7L5N7 544 aa20■□□□□ 0.79
CDX1-202ENST00000616154 TRMT11Q7Z4G4 463 aaKnown RBP20■□□□□ 0.79
CDX1-202ENST00000616154 TMEM25Q86YD3 366 aa20■□□□□ 0.79
CDX1-202ENST00000616154 NAT16Q8N8M0 369 aa20■□□□□ 0.79
CDX1-202ENST00000616154 C12orf29Q8N999 325 aa20■□□□□ 0.79
CDX1-202ENST00000616154 TERB1Q8NA31 727 aa20■□□□□ 0.79
CDX1-202ENST00000616154 RLN3Q8WXF3 142 aa20■□□□□ 0.79
CDX1-202ENST00000616154 FAXDC2Q96IV6 333 aa20■□□□□ 0.79
CDX1-202ENST00000616154 TMEM8AQ9HCN3 771 aa20■□□□□ 0.79
CDX1-202ENST00000616154 ZDHHC4Q9NPG8 344 aa20■□□□□ 0.79
CDX1-202ENST00000616154 TMEM9BQ9NQ34 198 aa20■□□□□ 0.79
CDX1-202ENST00000616154 CYLDQ9NQC7 956 aa20■□□□□ 0.79
CDX1-202ENST00000616154 FAM49BQ9NUQ9 324 aa20■□□□□ 0.79
CDX1-202ENST00000616154 BCCIPQ9P287 314 aaKnown RBP eCLIP20■□□□□ 0.79
CDX1-202ENST00000616154 EVLQ9UI08 416 aaPredicted RBP20■□□□□ 0.79
CDX1-202ENST00000616154 ASCC3Q8N3C0 2202 aaKnown RBP19.99■□□□□ 0.79
CDX1-202ENST00000616154 TCRBV21S2A2A0A5A6 115 aa19.99■□□□□ 0.79
CDX1-202ENST00000616154 PATE3B3GLJ2 98 aa19.99■□□□□ 0.79
CDX1-202ENST00000616154 CETN3O15182 167 aa19.99■□□□□ 0.79
CDX1-202ENST00000616154 SLC16A3O15427 465 aaKnown RBP19.99■□□□□ 0.79
CDX1-202ENST00000616154 GREM1O60565 184 aa19.99■□□□□ 0.79
CDX1-202ENST00000616154 TRIM49P0CI25 452 aa19.99■□□□□ 0.79
CDX1-202ENST00000616154 TRIM49CP0CI26 452 aa19.99■□□□□ 0.79
CDX1-202ENST00000616154 IRF1P10914 325 aa19.99■□□□□ 0.79
CDX1-202ENST00000616154 TRIM21P19474 475 aaKnown RBP19.99■□□□□ 0.79
CDX1-202ENST00000616154 BYSLQ13895 437 aaKnown RBP19.99■□□□□ 0.79
CDX1-202ENST00000616154 ANO4Q32M45 955 aa19.99■□□□□ 0.79
CDX1-202ENST00000616154 NUDT18Q6ZVK8 323 aa19.99■□□□□ 0.79
CDX1-202ENST00000616154 HTR3DQ70Z44 454 aa19.99■□□□□ 0.79
CDX1-202ENST00000616154 ZNF513Q8N8E2 541 aaPredicted RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms