RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 ATXN3LQ9H3M9 355 aa12.64□□□□□ -0.39
APOC1-206ENST00000590334 POPDC2Q9HBU9 364 aa12.64□□□□□ -0.39
APOC1-206ENST00000590334 ABCC13Q9NSE7 274 aa12.64□□□□□ -0.39
APOC1-206ENST00000590334 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.64□□□□□ -0.39
APOC1-206ENST00000590334 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.64□□□□□ -0.39
APOC1-206ENST00000590334 TMEM59LQ9UK28 342 aa12.64□□□□□ -0.39
APOC1-206ENST00000590334 INTUQ9ULD6 942 aa12.64□□□□□ -0.39
APOC1-206ENST00000590334 MRPS23Q9Y3D9 190 aaKnown RBP12.64□□□□□ -0.39
APOC1-206ENST00000590334 FAM170AA1A519 330 aa12.63□□□□□ -0.39
APOC1-206ENST00000590334 C2orf78A6NCI8 922 aa12.63□□□□□ -0.39
APOC1-206ENST00000590334 SIGLEC16A6NMB1 481 aa12.63□□□□□ -0.39
APOC1-206ENST00000590334 ARHGAP6O43182 974 aa12.63□□□□□ -0.39
APOC1-206ENST00000590334 RARGP13631 454 aa12.63□□□□□ -0.39
APOC1-206ENST00000590334 GJA1P17302 382 aa12.63□□□□□ -0.39
APOC1-206ENST00000590334 RRM1P23921 792 aa12.63□□□□□ -0.39
APOC1-206ENST00000590334 GALCP54803 685 aa12.63□□□□□ -0.39
APOC1-206ENST00000590334 GPC5P78333 572 aa12.63□□□□□ -0.39
APOC1-206ENST00000590334 CYP4F8P98187 520 aa12.63□□□□□ -0.39
APOC1-206ENST00000590334 TAF5Q15542 800 aa12.63□□□□□ -0.39
APOC1-206ENST00000590334 TEAD2Q15562 447 aa12.63□□□□□ -0.39
APOC1-206ENST00000590334 SMAD2Q15796 467 aaKnown RBP12.63□□□□□ -0.39
APOC1-206ENST00000590334 ARHGAP15Q53QZ3 475 aa12.63□□□□□ -0.39
APOC1-206ENST00000590334 HECTD3Q5T447 861 aa12.63□□□□□ -0.39
APOC1-206ENST00000590334 FAM102AQ5T9C2 384 aaPredicted RBP12.63□□□□□ -0.39
APOC1-206ENST00000590334 MSANTD2Q6P1R3 559 aa12.63□□□□□ -0.39
APOC1-206ENST00000590334 KLHDC10Q6PID8 442 aa12.63□□□□□ -0.39
APOC1-206ENST00000590334 POTEHQ6S545 545 aa12.63□□□□□ -0.39
APOC1-206ENST00000590334 DNAAF5Q86Y56 855 aa12.63□□□□□ -0.39
APOC1-206ENST00000590334 NPAS3Q8IXF0 933 aa12.63□□□□□ -0.39
APOC1-206ENST00000590334 GOLGA1Q92805 767 aa12.63□□□□□ -0.39
APOC1-206ENST00000590334 SLC2A13Q96QE2 648 aa12.63□□□□□ -0.39
APOC1-206ENST00000590334 CDK5RAP1Q96SZ6 601 aaKnown RBP12.63□□□□□ -0.39
APOC1-206ENST00000590334 THAP2Q9H0W7 228 aa12.63□□□□□ -0.39
APOC1-206ENST00000590334 TASP1Q9H6P5 420 aa12.63□□□□□ -0.39
APOC1-206ENST00000590334 PARVAQ9NVD7 372 aa12.63□□□□□ -0.39
APOC1-206ENST00000590334 GDE1Q9NZC3 331 aa12.63□□□□□ -0.39
APOC1-206ENST00000590334 ZFP37Q9Y6Q3 630 aaPredicted RBP12.63□□□□□ -0.39
APOC1-206ENST00000590334 UNC80Q8N2C7 3258 aa12.63□□□□□ -0.39
APOC1-206ENST00000590334 COCHO43405 550 aa12.62□□□□□ -0.39
APOC1-206ENST00000590334 TLR5O60602 858 aa12.62□□□□□ -0.39
APOC1-206ENST00000590334 DAB1O75553 588 aa12.62□□□□□ -0.39
APOC1-206ENST00000590334 CYP1A2P05177 515 aa12.62□□□□□ -0.39
APOC1-206ENST00000590334 H2AFZP0C0S5 128 aa12.62□□□□□ -0.39
APOC1-206ENST00000590334 TMEM253P0C7T8 217 aa12.62□□□□□ -0.39
APOC1-206ENST00000590334 RALAP11233 206 aa12.62□□□□□ -0.39
APOC1-206ENST00000590334 TFF2Q03403 129 aa12.62□□□□□ -0.39
APOC1-206ENST00000590334 MAMLD1Q13495 774 aa12.62□□□□□ -0.39
APOC1-206ENST00000590334 SPA17Q15506 151 aa12.62□□□□□ -0.39
APOC1-206ENST00000590334 STXBP5Q5T5C0 1151 aa12.62□□□□□ -0.39
APOC1-206ENST00000590334 GPR158Q5T848 1215 aa12.62□□□□□ -0.39
APOC1-206ENST00000590334 BTBD8Q5XKL5 378 aa12.62□□□□□ -0.39
APOC1-206ENST00000590334 TXNDC8Q6A555 127 aa12.62□□□□□ -0.39
APOC1-206ENST00000590334 PTCRAQ6ISU1 281 aaPredicted RBP12.62□□□□□ -0.39
APOC1-206ENST00000590334 H2AFVQ71UI9 128 aa12.62□□□□□ -0.39
APOC1-206ENST00000590334 TADA2BQ86TJ2 420 aa12.62□□□□□ -0.39
APOC1-206ENST00000590334 FGF13Q92913 245 aa12.62□□□□□ -0.39
APOC1-206ENST00000590334 NT5C3BQ969T7 300 aa12.62□□□□□ -0.39
APOC1-206ENST00000590334 FAM149B1Q96BN6 582 aa12.62□□□□□ -0.39
APOC1-206ENST00000590334 ZNF653Q96CK0 615 aa12.62□□□□□ -0.39
APOC1-206ENST00000590334 SLC46A2Q9BY10 475 aa12.62□□□□□ -0.39
APOC1-206ENST00000590334 PACSIN1Q9BY11 444 aa12.62□□□□□ -0.39
APOC1-206ENST00000590334 RNF38Q9H0F5 515 aa12.62□□□□□ -0.39
APOC1-206ENST00000590334 CCSER2Q9H7U1 834 aa12.62□□□□□ -0.39
APOC1-206ENST00000590334 PRDM6Q9NQX0 595 aa12.62□□□□□ -0.39
APOC1-206ENST00000590334 OLA1Q9NTK5 396 aaKnown RBP12.62□□□□□ -0.39
APOC1-206ENST00000590334 THEGQ9P2T0 379 aa12.62□□□□□ -0.39
APOC1-206ENST00000590334 CNOT8Q9UFF9 292 aaKnown RBP12.62□□□□□ -0.39
APOC1-206ENST00000590334 CDH7Q9ULB5 785 aa12.62□□□□□ -0.39
APOC1-206ENST00000590334 FAM50BQ9Y247 325 aa12.62□□□□□ -0.39
APOC1-206ENST00000590334 USTQ9Y2C2 406 aa12.62□□□□□ -0.39
APOC1-206ENST00000590334 REXO2Q9Y3B8 237 aaKnown RBP12.62□□□□□ -0.39
APOC1-206ENST00000590334 PCDHA13Q9Y5I0 950 aa12.62□□□□□ -0.39
APOC1-206ENST00000590334 SCINQ9Y6U3 715 aa12.62□□□□□ -0.39
APOC1-206ENST00000590334 TRAV19A0A0A6YYK7 116 aa12.61□□□□□ -0.39
APOC1-206ENST00000590334 GOLGA8SH3BPF8 625 aa12.61□□□□□ -0.39
APOC1-206ENST00000590334 NRDCO43847 1150 aa12.61□□□□□ -0.39
APOC1-206ENST00000590334 ABL1P00519 1130 aa12.61□□□□□ -0.39
APOC1-206ENST00000590334 IGLV3-25P01717 112 aa12.61□□□□□ -0.39
APOC1-206ENST00000590334 PTMAP06454 111 aaKnown RBP12.61□□□□□ -0.39
APOC1-206ENST00000590334 KRT3P12035 628 aa12.61□□□□□ -0.39
APOC1-206ENST00000590334 NCAM1P13591 858 aa12.61□□□□□ -0.39
APOC1-206ENST00000590334 ABCB4P21439 1286 aa12.61□□□□□ -0.39
APOC1-206ENST00000590334 NOS2P35228 1153 aa12.61□□□□□ -0.39
APOC1-206ENST00000590334 ATP5C1P36542 298 aaKnown RBP12.61□□□□□ -0.39
APOC1-206ENST00000590334 MATKP42679 507 aa12.61□□□□□ -0.39
APOC1-206ENST00000590334 MAGEA1P43355 309 aa12.61□□□□□ -0.39
APOC1-206ENST00000590334 SLC7A9P82251 487 aa12.61□□□□□ -0.39
APOC1-206ENST00000590334 TCEAL1Q15170 157 aa12.61□□□□□ -0.39
APOC1-206ENST00000590334 AAK1Q2M2I8 961 aa12.61□□□□□ -0.39
APOC1-206ENST00000590334 SYPL2Q5VXT5 272 aa12.61□□□□□ -0.39
APOC1-206ENST00000590334 TRNP1Q6NT89 227 aa12.61□□□□□ -0.39
APOC1-206ENST00000590334 DNAJC24Q6P3W2 148 aa12.61□□□□□ -0.39
APOC1-206ENST00000590334 GET4Q7L5D6 327 aaPredicted RBP12.61□□□□□ -0.39
APOC1-206ENST00000590334 CMTM8Q8IZV2 173 aa12.61□□□□□ -0.39
APOC1-206ENST00000590334 MAB21L3Q8N8X9 362 aa12.61□□□□□ -0.39
APOC1-206ENST00000590334 CTNNBL1Q8WYA6 563 aaPredicted RBP12.61□□□□□ -0.39
APOC1-206ENST00000590334 ING5Q8WYH8 240 aa12.61□□□□□ -0.39
APOC1-206ENST00000590334 EDEM1Q92611 657 aa12.61□□□□□ -0.39
APOC1-206ENST00000590334 ZSWIM3Q96MP5 696 aa12.61□□□□□ -0.39
APOC1-206ENST00000590334 SLC22A12Q96S37 553 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms