RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 SLC9A9Q8IVB4 645 aa15.31■□□□□ 0.04
SDF2-202ENST00000585428 FBXO44Q9H4M3 255 aa15.31■□□□□ 0.04
SDF2-202ENST00000585428 SLC32A1Q9H598 525 aa15.31■□□□□ 0.04
SDF2-202ENST00000585428 CAPN10Q9HC96 672 aa15.31■□□□□ 0.04
SDF2-202ENST00000585428 ATP8B3O60423 1300 aa15.31■□□□□ 0.04
SDF2-202ENST00000585428 PTPRDP23468 1912 aa15.31■□□□□ 0.04
SDF2-202ENST00000585428 TMEM8BA6NDV4 472 aa15.3■□□□□ 0.04
SDF2-202ENST00000585428 PRRT4C9JH25 899 aa15.3■□□□□ 0.04
SDF2-202ENST00000585428 RPN1P04843 607 aaKnown RBP15.3■□□□□ 0.04
SDF2-202ENST00000585428 CISD3P0C7P0 127 aa15.3■□□□□ 0.04
SDF2-202ENST00000585428 MAPK8P45983 427 aa15.3■□□□□ 0.04
SDF2-202ENST00000585428 DLG4P78352 724 aa15.3■□□□□ 0.04
SDF2-202ENST00000585428 ZNF33AQ06730 810 aa15.3■□□□□ 0.04
SDF2-202ENST00000585428 BIRC3Q13489 604 aa15.3■□□□□ 0.04
SDF2-202ENST00000585428 C10orf76Q5T2E6 689 aa15.3■□□□□ 0.04
SDF2-202ENST00000585428 THADAQ6YHU6 1953 aa15.3■□□□□ 0.04
SDF2-202ENST00000585428 UNC93AQ86WB7 457 aa15.3■□□□□ 0.04
SDF2-202ENST00000585428 DEFB119Q8N690 84 aa15.3■□□□□ 0.04
SDF2-202ENST00000585428 GOLGA5Q8TBA6 731 aa15.3■□□□□ 0.04
SDF2-202ENST00000585428 ACOX2Q99424 681 aa15.3■□□□□ 0.04
SDF2-202ENST00000585428 CYLDQ9NQC7 956 aa15.3■□□□□ 0.04
SDF2-202ENST00000585428 TLR8Q9NR97 1041 aaKnown RBP15.3■□□□□ 0.04
SDF2-202ENST00000585428 OSER1Q9NX31 292 aa15.3■□□□□ 0.04
SDF2-202ENST00000585428 WDR35Q9P2L0 1181 aa15.3■□□□□ 0.04
SDF2-202ENST00000585428 FBXO10Q9UK96 956 aa15.3■□□□□ 0.04
SDF2-202ENST00000585428 HELZP42694 1942 aaKnown RBP15.29■□□□□ 0.04
SDF2-202ENST00000585428 IGHV1OR15-9A0A0B4J2B8 117 aa15.29■□□□□ 0.04
SDF2-202ENST00000585428 FAM221BA6H8Z2 402 aa15.29■□□□□ 0.04
SDF2-202ENST00000585428 HHLA1C9JL84 531 aa15.29■□□□□ 0.04
SDF2-202ENST00000585428 IKBKBO14920 756 aa15.29■□□□□ 0.04
SDF2-202ENST00000585428 KLRC4O43908 158 aa15.29■□□□□ 0.04
SDF2-202ENST00000585428 CACNG3O60359 315 aa15.29■□□□□ 0.04
SDF2-202ENST00000585428 TLR5O60602 858 aa15.29■□□□□ 0.04
SDF2-202ENST00000585428 ZNF217O75362 1048 aa15.29■□□□□ 0.04
SDF2-202ENST00000585428 HOXB2P14652 356 aa15.29■□□□□ 0.04
SDF2-202ENST00000585428 TYRP14679 529 aa15.29■□□□□ 0.04
SDF2-202ENST00000585428 ATP5C1P36542 298 aaKnown RBP15.29■□□□□ 0.04
SDF2-202ENST00000585428 AFMP43652 599 aa15.29■□□□□ 0.04
SDF2-202ENST00000585428 NDST1P52848 882 aa15.29■□□□□ 0.04
SDF2-202ENST00000585428 MAP3K7CLP57077 242 aa15.29■□□□□ 0.04
SDF2-202ENST00000585428 RPL6Q02878 288 aaKnown RBP15.29■□□□□ 0.04
SDF2-202ENST00000585428 GFPT1Q06210 699 aaPredicted RBP15.29■□□□□ 0.04
SDF2-202ENST00000585428 STK4Q13043 487 aa15.29■□□□□ 0.04
SDF2-202ENST00000585428 ZACNQ401N2 412 aa15.29■□□□□ 0.04
SDF2-202ENST00000585428 EGFLAMQ63HQ2 1017 aa15.29■□□□□ 0.04
SDF2-202ENST00000585428 KIAA1211LQ6NV74 962 aa15.29■□□□□ 0.04
SDF2-202ENST00000585428 SLC41A1Q8IVJ1 513 aa15.29■□□□□ 0.04
SDF2-202ENST00000585428 C12orf29Q8N999 325 aa15.29■□□□□ 0.04
SDF2-202ENST00000585428 SLC2A14Q8TDB8 520 aa15.29■□□□□ 0.04
SDF2-202ENST00000585428 TAF4BQ92750 862 aa15.29■□□□□ 0.04
SDF2-202ENST00000585428 ZNF419Q96HQ0 510 aaPredicted RBP15.29■□□□□ 0.04
SDF2-202ENST00000585428 GABRG3Q99928 467 aa15.29■□□□□ 0.04
SDF2-202ENST00000585428 KCTD10Q9H3F6 313 aa15.29■□□□□ 0.04
SDF2-202ENST00000585428 FSCN3Q9NQT6 498 aa15.29■□□□□ 0.04
SDF2-202ENST00000585428 KRT82Q9NSB4 513 aa15.29■□□□□ 0.04
SDF2-202ENST00000585428 MARK1Q9P0L2 795 aa15.29■□□□□ 0.04
SDF2-202ENST00000585428 CALCOCO1Q9P1Z2 691 aa15.29■□□□□ 0.04
SDF2-202ENST00000585428 PCDHA7Q9UN72 937 aa15.29■□□□□ 0.04
SDF2-202ENST00000585428 SCML2Q9UQR0 700 aa15.29■□□□□ 0.04
SDF2-202ENST00000585428 NEUROG3Q9Y4Z2 214 aa15.29■□□□□ 0.04
SDF2-202ENST00000585428 NUP205Q92621 2012 aa15.29■□□□□ 0.04
SDF2-202ENST00000585428 K7ELQ4 463 aaPredicted RBP15.28■□□□□ 0.04
SDF2-202ENST00000585428 CFIP05156 583 aa15.28■□□□□ 0.04
SDF2-202ENST00000585428 IRF1P10914 325 aa15.28■□□□□ 0.04
SDF2-202ENST00000585428 CCDC130P13994 396 aa15.28■□□□□ 0.04
SDF2-202ENST00000585428 WASP42768 502 aa15.28■□□□□ 0.04
SDF2-202ENST00000585428 C1orf220Q5T0J3 134 aa15.28■□□□□ 0.04
SDF2-202ENST00000585428 RESP18Q5W5W9 173 aa15.28■□□□□ 0.04
SDF2-202ENST00000585428 GRAMD4Q6IC98 578 aa15.28■□□□□ 0.04
SDF2-202ENST00000585428 KLHDC10Q6PID8 442 aa15.28■□□□□ 0.04
SDF2-202ENST00000585428 SV2AQ7L0J3 742 aa15.28■□□□□ 0.04
SDF2-202ENST00000585428 ZNF276Q8N554 614 aa15.28■□□□□ 0.04
SDF2-202ENST00000585428 TMC2Q8TDI7 906 aa15.28■□□□□ 0.04
SDF2-202ENST00000585428 IPO4Q8TEX9 1081 aaKnown RBP15.28■□□□□ 0.04
SDF2-202ENST00000585428 XPO6Q96QU8 1125 aaKnown RBP15.28■□□□□ 0.04
SDF2-202ENST00000585428 HNRNPABQ99729 332 aaKnown RBP15.28■□□□□ 0.04
SDF2-202ENST00000585428 BBS2Q9BXC9 721 aa15.28■□□□□ 0.04
SDF2-202ENST00000585428 NACA2Q9H009 215 aa15.28■□□□□ 0.04
SDF2-202ENST00000585428 DNAJC17Q9NVM6 304 aaKnown RBP15.28■□□□□ 0.04
SDF2-202ENST00000585428 HMGXB4Q9UGU5 601 aa15.28■□□□□ 0.04
SDF2-202ENST00000585428 MSRB2Q9Y3D2 182 aa15.28■□□□□ 0.04
SDF2-202ENST00000585428 ATXN2Q99700 1313 aaKnown RBP15.27■□□□□ 0.04
SDF2-202ENST00000585428 SPAARA0A1B0GVQ0 90 aa15.27■□□□□ 0.04
SDF2-202ENST00000585428 SRRM3A6NNA2 597 aaPredicted RBP15.27■□□□□ 0.04
SDF2-202ENST00000585428 NEDD8-MDP1E9PL57 170 aa15.27■□□□□ 0.04
SDF2-202ENST00000585428 GFRA2O00451 464 aa15.27■□□□□ 0.04
SDF2-202ENST00000585428 PDXKO00764 312 aa15.27■□□□□ 0.04
SDF2-202ENST00000585428 ARHGAP33O14559 1287 aa15.27■□□□□ 0.04
SDF2-202ENST00000585428 HYAL3O43820 417 aaPredicted RBP15.27■□□□□ 0.04
SDF2-202ENST00000585428 ASS1P00966 412 aaKnown RBP15.27■□□□□ 0.04
SDF2-202ENST00000585428 P4HA1P13674 534 aa15.27■□□□□ 0.04
SDF2-202ENST00000585428 CD59P13987 128 aa15.27■□□□□ 0.04
SDF2-202ENST00000585428 NDUFV2P19404 249 aa15.27■□□□□ 0.04
SDF2-202ENST00000585428 PLA2G4AP47712 749 aa15.27■□□□□ 0.04
SDF2-202ENST00000585428 FAM193AP78312 1265 aa15.27■□□□□ 0.04
SDF2-202ENST00000585428 ORC1Q13415 861 aa15.27■□□□□ 0.04
SDF2-202ENST00000585428 SDE2Q6IQ49 451 aa15.27■□□□□ 0.04
SDF2-202ENST00000585428 SCARA5Q6ZMJ2 495 aa15.27■□□□□ 0.04
SDF2-202ENST00000585428 Q6ZNB5 142 aa15.27■□□□□ 0.04
SDF2-202ENST00000585428 TPGS1Q6ZTW0 290 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms