RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 HCFC2Q9Y5Z7 792 aa16.89■□□□□ 0.29
SS18-226ENST00000585241 ENDOD1O94919 500 aa16.88■□□□□ 0.29
SS18-226ENST00000585241 LRG1P02750 347 aa16.88■□□□□ 0.29
SS18-226ENST00000585241 HNRNPA1P09651 372 aaKnown RBP eCLIP16.88■□□□□ 0.29
SS18-226ENST00000585241 TNNT1P13805 278 aa16.88■□□□□ 0.29
SS18-226ENST00000585241 EPCAMP16422 314 aa16.88■□□□□ 0.29
SS18-226ENST00000585241 COMTP21964 271 aa16.88■□□□□ 0.29
SS18-226ENST00000585241 RNASE9P60153 205 aaKnown RBP16.88■□□□□ 0.29
SS18-226ENST00000585241 IFRD2Q12894 506 aaPredicted RBP16.88■□□□□ 0.29
SS18-226ENST00000585241 SLC25A52Q3SY17 297 aa16.88■□□□□ 0.29
SS18-226ENST00000585241 MEI1Q5TIA1 1274 aa16.88■□□□□ 0.29
SS18-226ENST00000585241 OTUD1Q5VV17 481 aaPredicted RBP16.88■□□□□ 0.29
SS18-226ENST00000585241 MSANTD2Q6P1R3 559 aa16.88■□□□□ 0.29
SS18-226ENST00000585241 STRADAQ7RTN6 431 aa16.88■□□□□ 0.29
SS18-226ENST00000585241 DNAJB7Q7Z6W7 309 aaPredicted RBP16.88■□□□□ 0.29
SS18-226ENST00000585241 GOLGA1Q92805 767 aa16.88■□□□□ 0.29
SS18-226ENST00000585241 PPP2R3CQ969Q6 453 aa16.88■□□□□ 0.29
SS18-226ENST00000585241 PGAP3Q96FM1 320 aaPredicted RBP16.88■□□□□ 0.29
SS18-226ENST00000585241 SLITRK1Q96PX8 696 aa16.88■□□□□ 0.29
SS18-226ENST00000585241 NCAPGQ9BPX3 1015 aa16.88■□□□□ 0.29
SS18-226ENST00000585241 LRRC3Q9BY71 257 aa16.88■□□□□ 0.29
SS18-226ENST00000585241 TLE6Q9H808 572 aa16.88■□□□□ 0.29
SS18-226ENST00000585241 ABCC13Q9NSE7 274 aa16.88■□□□□ 0.29
SS18-226ENST00000585241 ZDHHC7Q9NXF8 308 aa16.88■□□□□ 0.29
SS18-226ENST00000585241 STAP1Q9ULZ2 295 aa16.88■□□□□ 0.29
SS18-226ENST00000585241 MYO9BQ13459 2157 aa16.88■□□□□ 0.29
SS18-226ENST00000585241 A0A1W2PQH9 124 aa16.87■□□□□ 0.29
SS18-226ENST00000585241 TMEM110-MUSTN1A8MSY1 372 aa16.87■□□□□ 0.29
SS18-226ENST00000585241 PER2O15055 1255 aa16.87■□□□□ 0.29
SS18-226ENST00000585241 LRCH4O75427 683 aa16.87■□□□□ 0.29
SS18-226ENST00000585241 FTCDO95954 541 aa16.87■□□□□ 0.29
SS18-226ENST00000585241 IGLV3-25P01717 112 aa16.87■□□□□ 0.29
SS18-226ENST00000585241 CTNNA2P26232 953 aa16.87■□□□□ 0.29
SS18-226ENST00000585241 PCK1P35558 622 aa16.87■□□□□ 0.29
SS18-226ENST00000585241 PPP3CCP48454 512 aa16.87■□□□□ 0.29
SS18-226ENST00000585241 PGFP49763 221 aa16.87■□□□□ 0.29
SS18-226ENST00000585241 PPM1LQ5SGD2 360 aa16.87■□□□□ 0.29
SS18-226ENST00000585241 SYPL2Q5VXT5 272 aa16.87■□□□□ 0.29
SS18-226ENST00000585241 ELMSAN1Q6PJG2 1045 aa16.87■□□□□ 0.29
SS18-226ENST00000585241 SYT10Q6XYQ8 523 aa16.87■□□□□ 0.29
SS18-226ENST00000585241 PEX26Q7Z412 305 aa16.87■□□□□ 0.29
SS18-226ENST00000585241 CPNE8Q86YQ8 564 aa16.87■□□□□ 0.29
SS18-226ENST00000585241 TMC8Q8IU68 726 aa16.87■□□□□ 0.29
SS18-226ENST00000585241 ARFGAP1Q8N6T3 406 aa16.87■□□□□ 0.29
SS18-226ENST00000585241 HES6Q96HZ4 224 aa16.87■□□□□ 0.29
SS18-226ENST00000585241 CFAP57Q96MR6 1250 aa16.87■□□□□ 0.29
SS18-226ENST00000585241 NAPGQ99747 312 aaPredicted RBP16.87■□□□□ 0.29
SS18-226ENST00000585241 TLR10Q9BXR5 811 aa16.87■□□□□ 0.29
SS18-226ENST00000585241 ADAM33Q9BZ11 813 aa16.87■□□□□ 0.29
SS18-226ENST00000585241 TTYH1Q9H313 450 aaPredicted RBP16.87■□□□□ 0.29
SS18-226ENST00000585241 NSUN3Q9H649 340 aaKnown RBP16.87■□□□□ 0.29
SS18-226ENST00000585241 IL21Q9HBE4 155 aa16.87■□□□□ 0.29
SS18-226ENST00000585241 TLR8Q9NR97 1041 aaKnown RBP16.87■□□□□ 0.29
SS18-226ENST00000585241 OSER1Q9NX31 292 aa16.87■□□□□ 0.29
SS18-226ENST00000585241 DNAI1Q9UI46 699 aa16.87■□□□□ 0.29
SS18-226ENST00000585241 AMFRQ9UKV5 643 aa16.87■□□□□ 0.29
SS18-226ENST00000585241 NAALADL1Q9UQQ1 740 aa16.87■□□□□ 0.29
SS18-226ENST00000585241 TRANK1O15050 2925 aa16.86■□□□□ 0.29
SS18-226ENST00000585241 MIF4GDA9UHW6 222 aaKnown RBP16.86■□□□□ 0.29
SS18-226ENST00000585241 TADA3O75528 432 aa16.86■□□□□ 0.29
SS18-226ENST00000585241 POU3F3P20264 500 aaPredicted RBP16.86■□□□□ 0.29
SS18-226ENST00000585241 NRIP1P48552 1158 aa16.86■□□□□ 0.29
SS18-226ENST00000585241 EPHA5P54756 1037 aa16.86■□□□□ 0.29
SS18-226ENST00000585241 EIF4EBP2Q13542 120 aaPredicted RBP16.86■□□□□ 0.29
SS18-226ENST00000585241 C15orf59Q2T9L4 293 aaPredicted RBP16.86■□□□□ 0.29
SS18-226ENST00000585241 DCAF6Q58WW2 860 aa16.86■□□□□ 0.29
SS18-226ENST00000585241 LRRC38Q5VT99 294 aa16.86■□□□□ 0.29
SS18-226ENST00000585241 PAPD7Q5XG87 772 aaKnown RBP16.86■□□□□ 0.29
SS18-226ENST00000585241 BTBD8Q5XKL5 378 aa16.86■□□□□ 0.29
SS18-226ENST00000585241 TMEM184AQ6ZMB5 413 aa16.86■□□□□ 0.29
SS18-226ENST00000585241 CMASQ8NFW8 434 aaPredicted RBP16.86■□□□□ 0.29
SS18-226ENST00000585241 SMOC2Q9H3U7 446 aa16.86■□□□□ 0.29
SS18-226ENST00000585241 ZNF334Q9HCZ1 680 aaPredicted RBP16.86■□□□□ 0.29
SS18-226ENST00000585241 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.86■□□□□ 0.29
SS18-226ENST00000585241 TMEM51Q9NW97 253 aa16.86■□□□□ 0.29
SS18-226ENST00000585241 MAGED2Q9UNF1 606 aaPredicted RBP16.86■□□□□ 0.29
SS18-226ENST00000585241 CTAGE9A4FU28 777 aa16.85■□□□□ 0.29
SS18-226ENST00000585241 ZNF840PA6NDX5 716 aa16.85■□□□□ 0.29
SS18-226ENST00000585241 CAPN9O14815 690 aa16.85■□□□□ 0.29
SS18-226ENST00000585241 PSTPIP1O43586 416 aa16.85■□□□□ 0.29
SS18-226ENST00000585241 SPOPO43791 374 aa16.85■□□□□ 0.29
SS18-226ENST00000585241 F11P03951 625 aa16.85■□□□□ 0.29
SS18-226ENST00000585241 NCAM1P13591 858 aa16.85■□□□□ 0.29
SS18-226ENST00000585241 DESP17661 470 aa16.85■□□□□ 0.29
SS18-226ENST00000585241 TFE3P19532 575 aaPredicted RBP16.85■□□□□ 0.29
SS18-226ENST00000585241 CTNNA1P35221 906 aaKnown RBP16.85■□□□□ 0.29
SS18-226ENST00000585241 TUBP50607 506 aa16.85■□□□□ 0.29
SS18-226ENST00000585241 HDAC4P56524 1084 aa16.85■□□□□ 0.29
SS18-226ENST00000585241 PITX1P78337 314 aaPredicted RBP16.85■□□□□ 0.29
SS18-226ENST00000585241 SLC25A11Q02978 314 aaKnown RBP16.85■□□□□ 0.29
SS18-226ENST00000585241 CC2D1AQ6P1N0 951 aaPredicted RBP16.85■□□□□ 0.29
SS18-226ENST00000585241 TMEM150AQ86TG1 271 aa16.85■□□□□ 0.29
SS18-226ENST00000585241 RBM23Q86U06 439 aaKnown RBP16.85■□□□□ 0.29
SS18-226ENST00000585241 ELMOD1Q8N336 334 aa16.85■□□□□ 0.29
SS18-226ENST00000585241 VN1R2Q8NFZ6 395 aa16.85■□□□□ 0.29
SS18-226ENST00000585241 DQX1Q8TE96 717 aaKnown RBP16.85■□□□□ 0.29
SS18-226ENST00000585241 FAM172AQ8WUF8 416 aa16.85■□□□□ 0.29
SS18-226ENST00000585241 EDEM1Q92611 657 aa16.85■□□□□ 0.29
SS18-226ENST00000585241 CASP10Q92851 521 aa16.85■□□□□ 0.29
SS18-226ENST00000585241 ZNF512Q96ME7 567 aaPredicted RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms