RNA–Protein interactions for RNA: ENST00000582252.1

CCDC47-204, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2 BASIC

Gene CCDC47, Length 1,719 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-204ENST00000582252 PAWRQ96IZ0 340 aaKnown RBP23.61■■□□□ 1.37
CCDC47-204ENST00000582252 OSBPL7Q9BZF2 842 aa23.61■■□□□ 1.37
CCDC47-204ENST00000582252 LRRC4Q9HBW1 653 aa23.61■■□□□ 1.37
CCDC47-204ENST00000582252 PCDH18Q9HCL0 1135 aa23.61■■□□□ 1.37
CCDC47-204ENST00000582252 TET1Q8NFU7 2136 aa23.6■■□□□ 1.37
CCDC47-204ENST00000582252 CFAP69A5D8W1 941 aa23.6■■□□□ 1.37
CCDC47-204ENST00000582252 MEIS3P2A8K0S8 358 aa23.6■■□□□ 1.37
CCDC47-204ENST00000582252 TCEA3O75764 348 aa23.6■■□□□ 1.37
CCDC47-204ENST00000582252 FAM200BP0CF97 657 aa23.6■■□□□ 1.37
CCDC47-204ENST00000582252 TKTP29401 623 aaKnown RBP23.6■■□□□ 1.37
CCDC47-204ENST00000582252 MAGEA4P43358 317 aa23.6■■□□□ 1.37
CCDC47-204ENST00000582252 SCNN1GP51170 649 aa23.6■■□□□ 1.37
CCDC47-204ENST00000582252 CLCNKBP51801 687 aa23.6■■□□□ 1.37
CCDC47-204ENST00000582252 HDAC4P56524 1084 aa23.6■■□□□ 1.37
CCDC47-204ENST00000582252 CENPUQ71F23 418 aa23.6■■□□□ 1.37
CCDC47-204ENST00000582252 PRUNE1Q86TP1 453 aa23.6■■□□□ 1.37
CCDC47-204ENST00000582252 PIGZQ86VD9 579 aa23.6■■□□□ 1.37
CCDC47-204ENST00000582252 PPIL6Q8IXY8 311 aa23.6■■□□□ 1.37
CCDC47-204ENST00000582252 UHMK1Q8TAS1 419 aaKnown RBP23.6■■□□□ 1.37
CCDC47-204ENST00000582252 LPPQ93052 612 aa23.6■■□□□ 1.37
CCDC47-204ENST00000582252 C11orf84Q9BUA3 381 aaPredicted RBP23.6■■□□□ 1.37
CCDC47-204ENST00000582252 SLC12A6Q9UHW9 1150 aa23.6■■□□□ 1.37
CCDC47-204ENST00000582252 SCN5AQ14524 2016 aa23.6■■□□□ 1.37
CCDC47-204ENST00000582252 SMIM23A6NLE4 172 aa23.59■■□□□ 1.37
CCDC47-204ENST00000582252 DAB1O75553 588 aa23.59■■□□□ 1.37
CCDC47-204ENST00000582252 ETS1P14921 441 aa23.59■■□□□ 1.37
CCDC47-204ENST00000582252 ZFXP17010 805 aaPredicted RBP23.59■■□□□ 1.37
CCDC47-204ENST00000582252 PCSK1P29120 753 aa23.59■■□□□ 1.37
CCDC47-204ENST00000582252 LSP1P33241 339 aa23.59■■□□□ 1.37
CCDC47-204ENST00000582252 MMRN1Q13201 1228 aa23.59■■□□□ 1.37
CCDC47-204ENST00000582252 DSC3Q14574 896 aa23.59■■□□□ 1.37
CCDC47-204ENST00000582252 STAT4Q14765 748 aa23.59■■□□□ 1.37
CCDC47-204ENST00000582252 KYNUQ16719 465 aa23.59■■□□□ 1.37
CCDC47-204ENST00000582252 MDH1BQ5I0G3 518 aa23.59■■□□□ 1.37
CCDC47-204ENST00000582252 DARS2Q6PI48 645 aaKnown RBP23.59■■□□□ 1.37
CCDC47-204ENST00000582252 FAM43BQ6ZT52 329 aaPredicted RBP23.59■■□□□ 1.37
CCDC47-204ENST00000582252 NECAB2Q7Z6G3 386 aa23.59■■□□□ 1.37
CCDC47-204ENST00000582252 EPS8L3Q8TE67 593 aaKnown RBP23.59■■□□□ 1.37
CCDC47-204ENST00000582252 SYT15Q9BQS2 421 aa23.59■■□□□ 1.37
CCDC47-204ENST00000582252 DNAJC17Q9NVM6 304 aaKnown RBP23.59■■□□□ 1.37
CCDC47-204ENST00000582252 SAE1Q9UBE0 346 aaPredicted RBP23.59■■□□□ 1.37
CCDC47-204ENST00000582252 CDH9Q9ULB4 789 aa23.59■■□□□ 1.37
CCDC47-204ENST00000582252 TDRD15B5MCY1 1934 aaKnown RBP23.59■■□□□ 1.37
CCDC47-204ENST00000582252 A0A0U1RQF3 1178 aa23.59■■□□□ 1.37
CCDC47-204ENST00000582252 ARHGEF37A1IGU5 675 aa23.59■■□□□ 1.37
CCDC47-204ENST00000582252 FBXO21O94952 628 aa23.59■■□□□ 1.37
CCDC47-204ENST00000582252 ODC1P11926 461 aa23.59■■□□□ 1.37
CCDC47-204ENST00000582252 PECAM1P16284 738 aaPredicted RBP23.59■■□□□ 1.37
CCDC47-204ENST00000582252 MATKP42679 507 aa23.59■■□□□ 1.37
CCDC47-204ENST00000582252 GUCY1A3Q02108 690 aa23.59■■□□□ 1.37
CCDC47-204ENST00000582252 FAAP100Q0VG06 881 aa23.59■■□□□ 1.37
CCDC47-204ENST00000582252 GRIK3Q13003 919 aa23.59■■□□□ 1.37
CCDC47-204ENST00000582252 ANKRD20A8PQ5CZ79 823 aa23.59■■□□□ 1.37
CCDC47-204ENST00000582252 SIX6OS1Q8N1H7 587 aa23.59■■□□□ 1.37
CCDC47-204ENST00000582252 BCAS4Q8TDM0 211 aa23.59■■□□□ 1.37
CCDC47-204ENST00000582252 CLEC4CQ8WTT0 213 aa23.59■■□□□ 1.37
CCDC47-204ENST00000582252 UROC1Q96N76 676 aa23.59■■□□□ 1.37
CCDC47-204ENST00000582252 HIPK3Q9H422 1215 aa23.59■■□□□ 1.37
CCDC47-204ENST00000582252 PRDM16Q9HAZ2 1276 aa23.59■■□□□ 1.37
CCDC47-204ENST00000582252 SAYSD1Q9NPB0 183 aa23.59■■□□□ 1.37
CCDC47-204ENST00000582252 PARNO95453 639 aaKnown RBP23.58■■□□□ 1.37
CCDC47-204ENST00000582252 ACAT1P24752 427 aaKnown RBP23.58■■□□□ 1.37
CCDC47-204ENST00000582252 BCAR1P56945 870 aa23.58■■□□□ 1.37
CCDC47-204ENST00000582252 ADIGQ0VDE8 80 aa23.58■■□□□ 1.37
CCDC47-204ENST00000582252 DPYSL2Q16555 572 aa23.58■■□□□ 1.37
CCDC47-204ENST00000582252 TTC19Q6DKK2 380 aaPredicted RBP23.58■■□□□ 1.37
CCDC47-204ENST00000582252 METTL23Q86XA0 190 aa23.58■■□□□ 1.37
CCDC47-204ENST00000582252 PSTKQ8IV42 348 aaKnown RBP23.58■■□□□ 1.37
CCDC47-204ENST00000582252 FAF2Q96CS3 445 aa23.58■■□□□ 1.37
CCDC47-204ENST00000582252 EPN3Q9H201 632 aa23.58■■□□□ 1.37
CCDC47-204ENST00000582252 MIOSQ9NXC5 875 aa23.58■■□□□ 1.37
CCDC47-204ENST00000582252 STAP1Q9ULZ2 295 aa23.58■■□□□ 1.37
CCDC47-204ENST00000582252 A0A087WUV0 522 aaPredicted RBP23.57■■□□□ 1.36
CCDC47-204ENST00000582252 ATP2C2O75185 946 aa23.57■■□□□ 1.36
CCDC47-204ENST00000582252 MRPS5P82675 430 aaKnown RBP23.57■■□□□ 1.36
CCDC47-204ENST00000582252 AUHQ13825 339 aaKnown RBP23.57■■□□□ 1.36
CCDC47-204ENST00000582252 UPP1Q16831 310 aa23.57■■□□□ 1.36
CCDC47-204ENST00000582252 SLC25A52Q3SY17 297 aa23.57■■□□□ 1.36
CCDC47-204ENST00000582252 RAB6CQ53S08 254 aa23.57■■□□□ 1.36
CCDC47-204ENST00000582252 ZC3H12AQ5D1E8 599 aaKnown RBP23.57■■□□□ 1.36
CCDC47-204ENST00000582252 SLC9A4Q6AI14 798 aa23.57■■□□□ 1.36
CCDC47-204ENST00000582252 RIBC1Q8N443 379 aaPredicted RBP23.57■■□□□ 1.36
CCDC47-204ENST00000582252 PRCCQ92733 491 aaPredicted RBP23.57■■□□□ 1.36
CCDC47-204ENST00000582252 FAM149B1Q96BN6 582 aa23.57■■□□□ 1.36
CCDC47-204ENST00000582252 FTHL17Q9BXU8 183 aa23.57■■□□□ 1.36
CCDC47-204ENST00000582252 RAB6CQ9H0N0 254 aa23.57■■□□□ 1.36
CCDC47-204ENST00000582252 DSEQ9UL01 958 aa23.57■■□□□ 1.36
CCDC47-204ENST00000582252 ATP11BQ9Y2G3 1177 aa23.57■■□□□ 1.36
CCDC47-204ENST00000582252 FARP1Q9Y4F1 1045 aaPredicted RBP23.57■■□□□ 1.36
CCDC47-204ENST00000582252 H7C0C1 242 aa23.56■■□□□ 1.36
CCDC47-204ENST00000582252 MGEA5O60502 916 aa23.56■■□□□ 1.36
CCDC47-204ENST00000582252 NOS2P35228 1153 aa23.56■■□□□ 1.36
CCDC47-204ENST00000582252 RPL22P35268 128 aaKnown RBP23.56■■□□□ 1.36
CCDC47-204ENST00000582252 ATP5OP48047 213 aa23.56■■□□□ 1.36
CCDC47-204ENST00000582252 HNRNPH2P55795 449 aaKnown RBP23.56■■□□□ 1.36
CCDC47-204ENST00000582252 ARL4CP56559 192 aa23.56■■□□□ 1.36
CCDC47-204ENST00000582252 TNFAIP8L3Q5GJ75 292 aa23.56■■□□□ 1.36
CCDC47-204ENST00000582252 CLEC20AQ6ZU45 233 aa23.56■■□□□ 1.36
CCDC47-204ENST00000582252 PLD5Q8N7P1 536 aa23.56■■□□□ 1.36
CCDC47-204ENST00000582252 ADAM2Q99965 735 aa23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms