RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 FBXL13Q8NEE6 735 aa16.77■□□□□ 0.27
HMBOX1-212ENST00000558662 RIN3Q8TB24 985 aa16.77■□□□□ 0.27
HMBOX1-212ENST00000558662 ACMSDQ8TDX5 336 aa16.77■□□□□ 0.27
HMBOX1-212ENST00000558662 PPP4R1Q8TF05 950 aa16.77■□□□□ 0.27
HMBOX1-212ENST00000558662 KAT5Q92993 513 aa16.77■□□□□ 0.27
HMBOX1-212ENST00000558662 PLEKHA8Q96JA3 519 aa16.77■□□□□ 0.27
HMBOX1-212ENST00000558662 ZMAT2Q96NC0 199 aaKnown RBP16.77■□□□□ 0.27
HMBOX1-212ENST00000558662 SLC4A9Q96Q91 983 aa16.77■□□□□ 0.27
HMBOX1-212ENST00000558662 DOK1Q99704 481 aa16.77■□□□□ 0.27
HMBOX1-212ENST00000558662 GPATCH1Q9BRR8 931 aaKnown RBP16.77■□□□□ 0.27
HMBOX1-212ENST00000558662 MRPL40Q9NQ50 206 aaKnown RBP16.77■□□□□ 0.27
HMBOX1-212ENST00000558662 PARVAQ9NVD7 372 aa16.77■□□□□ 0.27
HMBOX1-212ENST00000558662 GID8Q9NWU2 228 aa16.77■□□□□ 0.27
HMBOX1-212ENST00000558662 GIT1Q9Y2X7 761 aa16.77■□□□□ 0.27
HMBOX1-212ENST00000558662 NUB1Q9Y5A7 615 aa16.77■□□□□ 0.27
HMBOX1-212ENST00000558662 SLC30A1Q9Y6M5 507 aa16.77■□□□□ 0.27
HMBOX1-212ENST00000558662 COL4A1P02462 1669 aa16.76■□□□□ 0.27
HMBOX1-212ENST00000558662 PRSS51A0A1B0GVH4 220 aa16.76■□□□□ 0.27
HMBOX1-212ENST00000558662 TCRBV9S1A1TA0A576 114 aa16.76■□□□□ 0.27
HMBOX1-212ENST00000558662 IQCA1LA6NCM1 817 aa16.76■□□□□ 0.27
HMBOX1-212ENST00000558662 MEI4A8MW99 385 aa16.76■□□□□ 0.27
HMBOX1-212ENST00000558662 TRIM49D1C9J1S8 452 aa16.76■□□□□ 0.27
HMBOX1-212ENST00000558662 MSH4O15457 936 aa16.76■□□□□ 0.27
HMBOX1-212ENST00000558662 KRT1P04264 644 aa16.76■□□□□ 0.27
HMBOX1-212ENST00000558662 HP1BP3Q5SSJ5 553 aaPredicted RBP16.76■□□□□ 0.27
HMBOX1-212ENST00000558662 IRAK1BP1Q5VVH5 260 aa16.76■□□□□ 0.27
HMBOX1-212ENST00000558662 POLNQ7Z5Q5 900 aa16.76■□□□□ 0.27
HMBOX1-212ENST00000558662 FEZF2Q8TBJ5 459 aa16.76■□□□□ 0.27
HMBOX1-212ENST00000558662 ZNF597Q96LX8 424 aa16.76■□□□□ 0.27
HMBOX1-212ENST00000558662 RTFDC1Q9BY42 306 aaPredicted RBP16.76■□□□□ 0.27
HMBOX1-212ENST00000558662 C12orf65Q9H3J6 166 aaKnown RBP16.76■□□□□ 0.27
HMBOX1-212ENST00000558662 SEPT3Q9UH03 358 aa16.76■□□□□ 0.27
HMBOX1-212ENST00000558662 DYTNA2CJ06 578 aa16.75■□□□□ 0.27
HMBOX1-212ENST00000558662 TRIM64BA6NI03 449 aa16.75■□□□□ 0.27
HMBOX1-212ENST00000558662 SFI1A8K8P3 1242 aa16.75■□□□□ 0.27
HMBOX1-212ENST00000558662 FAM155AB1AL88 458 aaPredicted RBP16.75■□□□□ 0.27
HMBOX1-212ENST00000558662 PDGFRBP09619 1106 aa16.75■□□□□ 0.27
HMBOX1-212ENST00000558662 WEE2P0C1S8 567 aa16.75■□□□□ 0.27
HMBOX1-212ENST00000558662 CD58P19256 250 aa16.75■□□□□ 0.27
HMBOX1-212ENST00000558662 FUT4P22083 530 aa16.75■□□□□ 0.27
HMBOX1-212ENST00000558662 MAMLD1Q13495 774 aa16.75■□□□□ 0.27
HMBOX1-212ENST00000558662 ITGA7Q13683 1181 aa16.75■□□□□ 0.27
HMBOX1-212ENST00000558662 MIER3Q7Z3K6 550 aa16.75■□□□□ 0.27
HMBOX1-212ENST00000558662 AMIGO2Q86SJ2 522 aa16.75■□□□□ 0.27
HMBOX1-212ENST00000558662 HPS6Q86YV9 775 aa16.75■□□□□ 0.27
HMBOX1-212ENST00000558662 COLGALT2Q8IYK4 626 aa16.75■□□□□ 0.27
HMBOX1-212ENST00000558662 POU5F2Q8N7G0 328 aa16.75■□□□□ 0.27
HMBOX1-212ENST00000558662 PDPRQ8NCN5 879 aa16.75■□□□□ 0.27
HMBOX1-212ENST00000558662 TNIP2Q8NFZ5 429 aa16.75■□□□□ 0.27
HMBOX1-212ENST00000558662 TRUB1Q8WWH5 349 aaKnown RBP16.75■□□□□ 0.27
HMBOX1-212ENST00000558662 LRRC39Q96DD0 335 aa16.75■□□□□ 0.27
HMBOX1-212ENST00000558662 RMND5BQ96G75 393 aaPredicted RBP16.75■□□□□ 0.27
HMBOX1-212ENST00000558662 PPP1R10Q96QC0 940 aaKnown RBP16.75■□□□□ 0.27
HMBOX1-212ENST00000558662 HGH1Q9BTY7 390 aa16.75■□□□□ 0.27
HMBOX1-212ENST00000558662 CLK4Q9HAZ1 481 aaKnown RBP16.75■□□□□ 0.27
HMBOX1-212ENST00000558662 PARVBQ9HBI1 364 aa16.75■□□□□ 0.27
HMBOX1-212ENST00000558662 HSPBP1Q9NZL4 362 aa16.75■□□□□ 0.27
HMBOX1-212ENST00000558662 TSC22D4Q9Y3Q8 395 aa16.75■□□□□ 0.27
HMBOX1-212ENST00000558662 PCDHA1Q9Y5I3 950 aa16.75■□□□□ 0.27
HMBOX1-212ENST00000558662 GREB1LQ9C091 1923 aaPredicted RBP16.75■□□□□ 0.27
HMBOX1-212ENST00000558662 MYH9P35579 1960 aaKnown RBP16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 MEIS2O14770 477 aa16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 TPD52L2O43399 206 aaKnown RBP16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 GSTT2P0CG29 244 aa16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 GSTT2BP0CG30 244 aa16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 PRKCHP24723 683 aa16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 GABRB2P47870 512 aa16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 BBS9Q3SYG4 887 aa16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 CARM1Q86X55 608 aa16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 STARD8Q92502 1023 aa16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 TOP1MTQ969P6 601 aa16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 CCDC124Q96CT7 223 aaKnown RBP16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 THAP11Q96EK4 314 aa16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 CCDC138Q96M89 665 aa16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 PRDM11Q9NQV5 511 aa16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 SLC38A7Q9NVC3 462 aa16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 TEX264Q9Y6I9 313 aa16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 RGPD3A6NKT7 1758 aaPredicted RBP16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 RGPD4Q7Z3J3 1758 aa16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 IRS2Q9Y4H2 1338 aa16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 COL14A1Q05707 1796 aaKnown RBP16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 USP17L15C9J2P7 530 aa16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 USP17L13C9JLJ4 530 aa16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 USP17L11C9JVI0 530 aa16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 USP17L18D6R9N7 530 aa16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 USP17L22D6RA61 530 aa16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 USP17L17D6RBQ6 530 aa16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 USP17L19D6RCP7 530 aa16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 USP17L20D6RJB6 530 aa16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 C6orf229H3BNL8 230 aa16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 MCF2LO15068 1137 aa16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 ADAM23O75077 832 aa16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 COX4I1P13073 169 aa16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 RPS8P62241 208 aaKnown RBP16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 CYP4A11Q02928 519 aa16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 USP17L24Q0WX57 530 aa16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 MSS51Q4VC12 460 aa16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 FAXCQ5TGI0 409 aa16.74■□□□□ 0.27
HMBOX1-212ENST00000558662 IL23RQ5VWK5 629 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms