RNA–Protein interactions for RNA: ENST00000553622.5

CHD8-204, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-204ENST00000553622 GCNAQ96QF7 691 aa10.22□□□□□ -0.77
CHD8-204ENST00000553622 GAS2L1Q99501 681 aaPredicted RBP10.22□□□□□ -0.77
CHD8-204ENST00000553622 TRIM62Q9BVG3 475 aa10.22□□□□□ -0.77
CHD8-204ENST00000553622 NACA2Q9H009 215 aa10.22□□□□□ -0.77
CHD8-204ENST00000553622 FAM204AQ9H8W3 233 aa10.22□□□□□ -0.77
CHD8-204ENST00000553622 POPDC2Q9HBU9 364 aa10.22□□□□□ -0.77
CHD8-204ENST00000553622 TRPC7Q9HCX4 862 aa10.22□□□□□ -0.77
CHD8-204ENST00000553622 ASAH2Q9NR71 780 aa10.22□□□□□ -0.77
CHD8-204ENST00000553622 KCND1Q9NSA2 647 aa10.22□□□□□ -0.77
CHD8-204ENST00000553622 ASNSD1Q9NWL6 643 aa10.22□□□□□ -0.77
CHD8-204ENST00000553622 HCFC1R1Q9NWW0 138 aa10.22□□□□□ -0.77
CHD8-204ENST00000553622 TRPM5Q9NZQ8 1165 aa10.22□□□□□ -0.77
CHD8-204ENST00000553622 UXTQ9UBK9 157 aaPredicted RBP10.22□□□□□ -0.77
CHD8-204ENST00000553622 TMEM59LQ9UK28 342 aa10.22□□□□□ -0.77
CHD8-204ENST00000553622 NUDT5Q9UKK9 219 aa10.22□□□□□ -0.77
CHD8-204ENST00000553622 STAP1Q9ULZ2 295 aa10.22□□□□□ -0.77
CHD8-204ENST00000553622 ASB3Q9Y575 518 aa10.22□□□□□ -0.77
CHD8-204ENST00000553622 BRWD1Q9NSI6 2320 aa10.21□□□□□ -0.77
CHD8-204ENST00000553622 CCDC195A0A1B0GUA6 201 aa10.21□□□□□ -0.77
CHD8-204ENST00000553622 C2CD4BA6NLJ0 364 aa10.21□□□□□ -0.77
CHD8-204ENST00000553622 LINC01565O15544 149 aa10.21□□□□□ -0.77
CHD8-204ENST00000553622 RNF8O76064 485 aa10.21□□□□□ -0.77
CHD8-204ENST00000553622 MTA2O94776 668 aa10.21□□□□□ -0.77
CHD8-204ENST00000553622 GLI1P08151 1106 aa10.21□□□□□ -0.77
CHD8-204ENST00000553622 HNRNPA1P09651 372 aaKnown RBP eCLIP10.21□□□□□ -0.77
CHD8-204ENST00000553622 RARGP13631 454 aa10.21□□□□□ -0.77
CHD8-204ENST00000553622 HMGA1P17096 107 aaKnown RBP10.21□□□□□ -0.77
CHD8-204ENST00000553622 GABRR2P28476 465 aa10.21□□□□□ -0.77
CHD8-204ENST00000553622 MATKP42679 507 aa10.21□□□□□ -0.77
CHD8-204ENST00000553622 PGFP49763 221 aa10.21□□□□□ -0.77
CHD8-204ENST00000553622 ZNF143P52747 638 aaPredicted RBP10.21□□□□□ -0.77
CHD8-204ENST00000553622 NME3Q13232 169 aa10.21□□□□□ -0.77
CHD8-204ENST00000553622 PIGHQ14442 188 aaPredicted RBP10.21□□□□□ -0.77
CHD8-204ENST00000553622 C15orf59Q2T9L4 293 aaPredicted RBP10.21□□□□□ -0.77
CHD8-204ENST00000553622 C10orf120Q5SQS8 335 aa10.21□□□□□ -0.77
CHD8-204ENST00000553622 RARS2Q5T160 578 aaKnown RBP10.21□□□□□ -0.77
CHD8-204ENST00000553622 ZFYVE27Q5T4F4 411 aa10.21□□□□□ -0.77
CHD8-204ENST00000553622 SYPL2Q5VXT5 272 aa10.21□□□□□ -0.77
CHD8-204ENST00000553622 TRNP1Q6NT89 227 aa10.21□□□□□ -0.77
CHD8-204ENST00000553622 TMC5Q6UXY8 1006 aa10.21□□□□□ -0.77
CHD8-204ENST00000553622 BHLHA9Q7RTU4 235 aa10.21□□□□□ -0.77
CHD8-204ENST00000553622 PEX26Q7Z412 305 aa10.21□□□□□ -0.77
CHD8-204ENST00000553622 SCD5Q86SK9 330 aa10.21□□□□□ -0.77
CHD8-204ENST00000553622 CPNE8Q86YQ8 564 aa10.21□□□□□ -0.77
CHD8-204ENST00000553622 SYCE1Q8N0S2 351 aa10.21□□□□□ -0.77
CHD8-204ENST00000553622 SCML4Q8N228 414 aa10.21□□□□□ -0.77
CHD8-204ENST00000553622 SLC35F6Q8N357 371 aa10.21□□□□□ -0.77
CHD8-204ENST00000553622 PDZD8Q8NEN9 1154 aa10.21□□□□□ -0.77
CHD8-204ENST00000553622 VN1R2Q8NFZ6 395 aa10.21□□□□□ -0.77
CHD8-204ENST00000553622 TRIM58Q8NG06 486 aa10.21□□□□□ -0.77
CHD8-204ENST00000553622 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.21□□□□□ -0.77
CHD8-204ENST00000553622 HDAC7Q8WUI4 952 aa10.21□□□□□ -0.77
CHD8-204ENST00000553622 SMG7Q92540 1137 aaKnown RBP10.21□□□□□ -0.77
CHD8-204ENST00000553622 ZNF592Q92610 1267 aa10.21□□□□□ -0.77
CHD8-204ENST00000553622 KHSRPQ92945 711 aaKnown RBP eCLIP10.21□□□□□ -0.77
CHD8-204ENST00000553622 CALR3Q96L12 384 aaKnown RBP10.21□□□□□ -0.77
CHD8-204ENST00000553622 TTLL2Q9BWV7 592 aa10.21□□□□□ -0.77
CHD8-204ENST00000553622 SFXN1Q9H9B4 322 aa10.21□□□□□ -0.77
CHD8-204ENST00000553622 NMUR1Q9HB89 426 aa10.21□□□□□ -0.77
CHD8-204ENST00000553622 ZNF334Q9HCZ1 680 aaPredicted RBP10.21□□□□□ -0.77
CHD8-204ENST00000553622 ABCC13Q9NSE7 274 aa10.21□□□□□ -0.77
CHD8-204ENST00000553622 DZANK1Q9NVP4 752 aa10.21□□□□□ -0.77
CHD8-204ENST00000553622 M0QYT0 321 aa10.2□□□□□ -0.78
CHD8-204ENST00000553622 MDM4O15151 490 aa10.2□□□□□ -0.78
CHD8-204ENST00000553622 PROSCO94903 275 aa10.2□□□□□ -0.78
CHD8-204ENST00000553622 C1RP00736 705 aa10.2□□□□□ -0.78
CHD8-204ENST00000553622 GJA1P17302 382 aa10.2□□□□□ -0.78
CHD8-204ENST00000553622 PTPN2P17706 415 aa10.2□□□□□ -0.78
CHD8-204ENST00000553622 TFE3P19532 575 aaPredicted RBP10.2□□□□□ -0.78
CHD8-204ENST00000553622 COMTP21964 271 aa10.2□□□□□ -0.78
CHD8-204ENST00000553622 NOS2P35228 1153 aa10.2□□□□□ -0.78
CHD8-204ENST00000553622 PSEN1P49768 467 aa10.2□□□□□ -0.78
CHD8-204ENST00000553622 HADHBP55084 474 aaKnown RBP10.2□□□□□ -0.78
CHD8-204ENST00000553622 PITX1P78337 314 aaPredicted RBP10.2□□□□□ -0.78
CHD8-204ENST00000553622 NTHL1P78549 312 aa10.2□□□□□ -0.78
CHD8-204ENST00000553622 ZNF252P-AS1Q0IIN9 211 aa10.2□□□□□ -0.78
CHD8-204ENST00000553622 EFEMP1Q12805 493 aa10.2□□□□□ -0.78
CHD8-204ENST00000553622 TCEAL1Q15170 157 aa10.2□□□□□ -0.78
CHD8-204ENST00000553622 CCDC14Q49A88 953 aa10.2□□□□□ -0.78
CHD8-204ENST00000553622 DNTTIP2Q5QJE6 756 aaKnown RBP10.2□□□□□ -0.78
CHD8-204ENST00000553622 SH3PXD2AQ5TCZ1 1133 aa10.2□□□□□ -0.78
CHD8-204ENST00000553622 C11orf63Q6NUN7 778 aa10.2□□□□□ -0.78
CHD8-204ENST00000553622 SCYL2Q6P3W7 929 aa10.2□□□□□ -0.78
CHD8-204ENST00000553622 SYT10Q6XYQ8 523 aa10.2□□□□□ -0.78
CHD8-204ENST00000553622 PDZD4Q76G19 769 aaPredicted RBP10.2□□□□□ -0.78
CHD8-204ENST00000553622 Q7L0L9 218 aa10.2□□□□□ -0.78
CHD8-204ENST00000553622 RTL10Q7L3V2 364 aa10.2□□□□□ -0.78
CHD8-204ENST00000553622 GRASPQ7Z6J2 395 aaPredicted RBP10.2□□□□□ -0.78
CHD8-204ENST00000553622 EFHBQ8N7U6 833 aa10.2□□□□□ -0.78
CHD8-204ENST00000553622 TTC16Q8NEE8 873 aa10.2□□□□□ -0.78
CHD8-204ENST00000553622 NUP210Q8TEM1 1887 aaPredicted RBP10.2□□□□□ -0.78
CHD8-204ENST00000553622 FAM172AQ8WUF8 416 aa10.2□□□□□ -0.78
CHD8-204ENST00000553622 RNF34Q969K3 372 aa10.2□□□□□ -0.78
CHD8-204ENST00000553622 TRMT2BQ96GJ1 504 aaKnown RBP10.2□□□□□ -0.78
CHD8-204ENST00000553622 MYRFLQ96LU7 910 aa10.2□□□□□ -0.78
CHD8-204ENST00000553622 SLC2A13Q96QE2 648 aa10.2□□□□□ -0.78
CHD8-204ENST00000553622 TBCBQ99426 244 aa10.2□□□□□ -0.78
CHD8-204ENST00000553622 CNPY3Q9BT09 278 aa10.2□□□□□ -0.78
CHD8-204ENST00000553622 PRKD2Q9BZL6 878 aa10.2□□□□□ -0.78
CHD8-204ENST00000553622 ATXN3LQ9H3M9 355 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms