RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 SHROOM1Q2M3G4 852 aaPredicted RBP5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 DNAL1Q4LDG9 190 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 AKAP4Q5JQC9 854 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 NANOGP8Q6NSW7 305 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 C11orf63Q6NUN7 778 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 ALKBH5Q6P6C2 394 aaKnown RBP5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 FAM47EQ6ZV65 393 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 SYDE1Q6ZW31 735 aaPredicted RBP5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 EPM2AIP1Q7L775 607 aaPredicted RBP5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 TXNRD3Q86VQ6 643 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 CHSY1Q86X52 802 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 MCF2L2Q86YR7 1114 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 GRAMD2AQ8IUY3 354 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 MMAAQ8IVH4 418 aaKnown RBP5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 RHOT2Q8IXI1 618 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 ULK2Q8IYT8 1036 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 SLC43A3Q8NBI5 491 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 DAGLBQ8NCG7 672 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 OR7G1Q8NGA0 311 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 RFWD2Q8NHY2 731 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 CCDC110Q8TBZ0 833 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 TBC1D15Q8TC07 691 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 HCAR2Q8TDS4 363 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 CHAC2Q8WUX2 184 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 ALG3Q92685 438 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 CD101Q93033 1021 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 SNF8Q96H20 258 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 PRR11Q96HE9 360 aaPredicted RBP5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 MED30Q96HR3 178 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 ZNF496Q96IT1 587 aaPredicted RBP5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 PLEKHA8Q96JA3 519 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 MEGF10Q96KG7 1140 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 AK8Q96MA6 479 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 LSM14BQ9BX40 385 aaKnown RBP5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 MROQ9BYG7 248 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 TRIM55Q9BYV6 548 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 OSBPL8Q9BZF1 889 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 DRC3Q9H069 523 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 VPS11Q9H270 941 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 GOLPH3Q9H4A6 298 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 CNNM2Q9H8M5 875 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 PPCSQ9HAB8 311 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 VPS45Q9NRW7 570 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 ANKFY1Q9P2R3 1169 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 FETUBQ9UGM5 382 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 ADAMTS1Q9UHI8 967 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 USP21Q9UK80 565 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 RABL2BQ9UNT1 228 aa5.52□□□□□ -1.53
LSM3P2-201ENST00000551246 COL1A1P02452 1464 aaPredicted RBP5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 MARF1Q9Y4F3 1742 aaKnown RBP5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 ASTN2O75129 1339 aaPredicted RBP5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 NFASCO94856 1347 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 SMIM23A6NLE4 172 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 FOXO6A8MYZ6 492 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 MIF4GDA9UHW6 222 aaKnown RBP5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 LAD1O00515 517 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 FCHO1O14526 889 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 KLF11O14901 512 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 USP1O94782 785 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 FARP2O94887 1054 aaPredicted RBP5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 TNFAIP8O95379 198 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 PGM3O95394 542 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 C6orf222P0C671 652 aaPredicted RBP5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 FCER1AP12319 257 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 CDH3P22223 829 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 ENPP1P22413 925 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 ARNTP27540 789 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 HMOX2P30519 316 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 HOXC9P31274 260 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 CHKAP35790 457 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 STT3AP46977 705 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 IREB2P48200 963 aaKnown RBP5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 DNA2P51530 1060 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 TIMM10P62072 90 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 TUBA1BP68363 451 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 TXNL4AP83876 142 aaKnown RBP5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 CHRNEQ04844 493 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 PTK6Q13882 451 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 SEPT6Q14141 434 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 KRT81Q14533 505 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 NR1D2Q14995 579 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 EFTUD2Q15029 972 aaKnown RBP eCLIP5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 CCDC85BQ15834 202 aaPredicted RBP5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 MOGQ16653 247 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 MAPK6Q16659 721 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 LSM12Q3MHD2 195 aaKnown RBP5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 BOLA3Q53S33 107 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 TDRD12Q587J7 1177 aaKnown RBP5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 ARSHQ5FYA8 562 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 AGAP7PQ5VUJ5 663 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 SLX4IPQ5VYV7 408 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 FAAH2Q6GMR7 532 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 SLC30A10Q6XR72 485 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 TUBA1AQ71U36 451 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 FASTKD5Q7L8L6 764 aaKnown RBP5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 GPR180Q86V85 440 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 KBTBD6Q86V97 674 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 CHERPQ8IWX8 916 aaKnown RBP5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 ZNF654Q8IZM8 581 aa5.51□□□□□ -1.53
LSM3P2-201ENST00000551246 VPS52Q8N1B4 723 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms