RNA–Protein interactions for RNA: ENST00000542727.1

KNTC1-213, Transcript of kinetochore associated 1, humanhuman

TSL 3

Gene KNTC1, Length 203 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-213ENST00000542727 TRIM5Q9C035 493 aa2.89□□□□□ -1.95
KNTC1-213ENST00000542727 MS4A7Q9GZW8 240 aaPredicted RBP2.89□□□□□ -1.95
KNTC1-213ENST00000542727 ZCWPW1Q9H0M4 648 aa2.89□□□□□ -1.95
KNTC1-213ENST00000542727 FAM234AQ9H0X4 552 aa2.89□□□□□ -1.95
KNTC1-213ENST00000542727 ZMAT3Q9HA38 289 aaKnown RBP2.89□□□□□ -1.95
KNTC1-213ENST00000542727 C1orf112Q9NSG2 853 aa2.89□□□□□ -1.95
KNTC1-213ENST00000542727 OBP2AQ9NY56 170 aa2.89□□□□□ -1.95
KNTC1-213ENST00000542727 HEY2Q9UBP5 337 aa2.89□□□□□ -1.95
KNTC1-213ENST00000542727 A6NNZ2 444 aa2.88□□□□□ -1.95
KNTC1-213ENST00000542727 FOXN3O00409 490 aaPredicted RBP2.88□□□□□ -1.95
KNTC1-213ENST00000542727 BTN3A1O00481 513 aa2.88□□□□□ -1.95
KNTC1-213ENST00000542727 SMAD6O43541 496 aaKnown RBP2.88□□□□□ -1.95
KNTC1-213ENST00000542727 KRT86O43790 486 aa2.88□□□□□ -1.95
KNTC1-213ENST00000542727 VNN1O95497 513 aa2.88□□□□□ -1.95
KNTC1-213ENST00000542727 MAP4K4O95819 1239 aaPredicted RBP2.88□□□□□ -1.95
KNTC1-213ENST00000542727 CD19P15391 556 aa2.88□□□□□ -1.95
KNTC1-213ENST00000542727 MT3P25713 68 aa2.88□□□□□ -1.95
KNTC1-213ENST00000542727 TACR3P29371 465 aa2.88□□□□□ -1.95
KNTC1-213ENST00000542727 SLC7A1P30825 629 aa2.88□□□□□ -1.95
KNTC1-213ENST00000542727 DIO1P49895 249 aa2.88□□□□□ -1.95
KNTC1-213ENST00000542727 COPB1P53618 953 aaKnown RBP2.88□□□□□ -1.95
KNTC1-213ENST00000542727 TIAL1Q01085 375 aaKnown RBP eCLIP2.88□□□□□ -1.95
KNTC1-213ENST00000542727 CFHR3Q02985 330 aa2.88□□□□□ -1.95
KNTC1-213ENST00000542727 KRT81Q14533 505 aa2.88□□□□□ -1.95
KNTC1-213ENST00000542727 KIAA0753Q2KHM9 967 aa2.88□□□□□ -1.95
KNTC1-213ENST00000542727 ANO6Q4KMQ2 910 aa2.88□□□□□ -1.95
KNTC1-213ENST00000542727 LCE1EQ5T753 118 aa2.88□□□□□ -1.95
KNTC1-213ENST00000542727 RNF220Q5VTB9 566 aa2.88□□□□□ -1.95
KNTC1-213ENST00000542727 SKAP1Q86WV1 359 aa2.88□□□□□ -1.95
KNTC1-213ENST00000542727 MPP5Q8N3R9 675 aa2.88□□□□□ -1.95
KNTC1-213ENST00000542727 FAM156AQ8NDB6 213 aa2.88□□□□□ -1.95
KNTC1-213ENST00000542727 ACRBPQ8NEB7 543 aa2.88□□□□□ -1.95
KNTC1-213ENST00000542727 MAFAQ8NHW3 353 aaPredicted RBP2.88□□□□□ -1.95
KNTC1-213ENST00000542727 TMEM171Q8WVE6 324 aa2.88□□□□□ -1.95
KNTC1-213ENST00000542727 PPP2R3CQ969Q6 453 aa2.88□□□□□ -1.95
KNTC1-213ENST00000542727 CTHRC1Q96CG8 243 aa2.88□□□□□ -1.95
KNTC1-213ENST00000542727 ZNF668Q96K58 619 aaPredicted RBP2.88□□□□□ -1.95
KNTC1-213ENST00000542727 GBA2Q9HCG7 927 aaPredicted RBP2.88□□□□□ -1.95
KNTC1-213ENST00000542727 TMEM184CQ9NVA4 438 aa2.88□□□□□ -1.95
KNTC1-213ENST00000542727 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.88□□□□□ -1.95
KNTC1-213ENST00000542727 FAM50BQ9Y247 325 aa2.88□□□□□ -1.95
KNTC1-213ENST00000542727 CDY1Q9Y6F8 540 aa2.88□□□□□ -1.95
KNTC1-213ENST00000542727 USP19O94966 1318 aa2.88□□□□□ -1.95
KNTC1-213ENST00000542727 CAPN8A6NHC0 703 aa2.87□□□□□ -1.95
KNTC1-213ENST00000542727 PHGDHO43175 533 aaKnown RBP2.87□□□□□ -1.95
KNTC1-213ENST00000542727 TBC1D4O60343 1298 aa2.87□□□□□ -1.95
KNTC1-213ENST00000542727 NPR1P16066 1061 aa2.87□□□□□ -1.95
KNTC1-213ENST00000542727 CREB1P16220 341 aa2.87□□□□□ -1.95
KNTC1-213ENST00000542727 ZKSCAN1P17029 563 aaPredicted RBP2.87□□□□□ -1.95
KNTC1-213ENST00000542727 AGFG1P52594 562 aaKnown RBP2.87□□□□□ -1.95
KNTC1-213ENST00000542727 SUMO3P55854 103 aaPredicted RBP2.87□□□□□ -1.95
KNTC1-213ENST00000542727 TIRAPP58753 221 aa2.87□□□□□ -1.95
KNTC1-213ENST00000542727 SLC13A2Q13183 592 aa2.87□□□□□ -1.95
KNTC1-213ENST00000542727 CTBP1Q13363 440 aa2.87□□□□□ -1.95
KNTC1-213ENST00000542727 ST3GAL2Q16842 350 aa2.87□□□□□ -1.95
KNTC1-213ENST00000542727 ZNF750Q32MQ0 723 aa2.87□□□□□ -1.95
KNTC1-213ENST00000542727 CC2D1BQ5T0F9 858 aaKnown RBP2.87□□□□□ -1.95
KNTC1-213ENST00000542727 DCAF12L1Q5VU92 463 aa2.87□□□□□ -1.95
KNTC1-213ENST00000542727 DLK2Q6UY11 383 aa2.87□□□□□ -1.95
KNTC1-213ENST00000542727 COLCA1Q6ZS62 124 aa2.87□□□□□ -1.95
KNTC1-213ENST00000542727 MAEAQ7L5Y9 396 aa2.87□□□□□ -1.95
KNTC1-213ENST00000542727 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.87□□□□□ -1.95
KNTC1-213ENST00000542727 CCAR1Q8IX12 1150 aaKnown RBP2.87□□□□□ -1.95
KNTC1-213ENST00000542727 SUCLG2Q96I99 432 aa2.87□□□□□ -1.95
KNTC1-213ENST00000542727 APOL5Q9BWW9 433 aa2.87□□□□□ -1.95
KNTC1-213ENST00000542727 ZNF518BQ9C0D4 1074 aa2.87□□□□□ -1.95
KNTC1-213ENST00000542727 HIPK2Q9H2X6 1198 aa2.87□□□□□ -1.95
KNTC1-213ENST00000542727 FAM204AQ9H8W3 233 aa2.87□□□□□ -1.95
KNTC1-213ENST00000542727 ATP6V0A4Q9HBG4 840 aa2.87□□□□□ -1.95
KNTC1-213ENST00000542727 A1CFQ9NQ94 594 aaKnown RBP2.87□□□□□ -1.95
KNTC1-213ENST00000542727 SACM1LQ9NTJ5 587 aa2.87□□□□□ -1.95
KNTC1-213ENST00000542727 MGAT4CQ9UBM8 478 aa2.87□□□□□ -1.95
KNTC1-213ENST00000542727 RGS17Q9UGC6 210 aaPredicted RBP2.87□□□□□ -1.95
KNTC1-213ENST00000542727 TPCN1Q9ULQ1 816 aa2.87□□□□□ -1.95
KNTC1-213ENST00000542727 PCDHGB6Q9Y5F9 930 aa2.87□□□□□ -1.95
KNTC1-213ENST00000542727 MBD3L4A6NDZ8 208 aaPredicted RBP2.86□□□□□ -1.95
KNTC1-213ENST00000542727 MBD3L3A6NE82 208 aaPredicted RBP2.86□□□□□ -1.95
KNTC1-213ENST00000542727 A8MVJ9 347 aa2.86□□□□□ -1.95
KNTC1-213ENST00000542727 TMEM233B4DJY2 109 aa2.86□□□□□ -1.95
KNTC1-213ENST00000542727 PRSS44E7EML9 344 aa2.86□□□□□ -1.95
KNTC1-213ENST00000542727 TPP1O14773 563 aa2.86□□□□□ -1.95
KNTC1-213ENST00000542727 CD3EAPO15446 510 aaKnown RBP2.86□□□□□ -1.95
KNTC1-213ENST00000542727 SPRY2O43597 315 aa2.86□□□□□ -1.95
KNTC1-213ENST00000542727 CD63P08962 238 aa2.86□□□□□ -1.95
KNTC1-213ENST00000542727 TGFB3P10600 412 aa2.86□□□□□ -1.95
KNTC1-213ENST00000542727 BRAFP15056 766 aa2.86□□□□□ -1.95
KNTC1-213ENST00000542727 EN2P19622 333 aaPredicted RBP2.86□□□□□ -1.95
KNTC1-213ENST00000542727 UQCRC1P31930 480 aa2.86□□□□□ -1.95
KNTC1-213ENST00000542727 B4GALNT1Q00973 533 aa2.86□□□□□ -1.95
KNTC1-213ENST00000542727 FAM110CQ1W6H9 321 aa2.86□□□□□ -1.95
KNTC1-213ENST00000542727 SWSAP1Q6NVH7 229 aa2.86□□□□□ -1.95
KNTC1-213ENST00000542727 PDXDC1Q6P996 788 aa2.86□□□□□ -1.95
KNTC1-213ENST00000542727 DARS2Q6PI48 645 aaKnown RBP2.86□□□□□ -1.95
KNTC1-213ENST00000542727 KSR2Q6VAB6 950 aa2.86□□□□□ -1.95
KNTC1-213ENST00000542727 C18orf65Q6ZTR6 163 aa2.86□□□□□ -1.95
KNTC1-213ENST00000542727 KIAA0319LQ8IZA0 1049 aa2.86□□□□□ -1.95
KNTC1-213ENST00000542727 MMP21Q8N119 569 aa2.86□□□□□ -1.95
KNTC1-213ENST00000542727 KRT78Q8N1N4 520 aa2.86□□□□□ -1.95
KNTC1-213ENST00000542727 C12orf76Q8N812 135 aaPredicted RBP2.86□□□□□ -1.95
KNTC1-213ENST00000542727 PNPLA1Q8N8W4 532 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms