RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 PJA1Q8NG27 643 aa6.05□□□□□ -1.44
PRKDC-205ENST00000535375 WDYHV1Q96HA8 205 aa6.05□□□□□ -1.44
PRKDC-205ENST00000535375 SH2D3AQ9BRG2 576 aa6.05□□□□□ -1.44
PRKDC-205ENST00000535375 PCGF6Q9BYE7 350 aa6.05□□□□□ -1.44
PRKDC-205ENST00000535375 USP29Q9HBJ7 922 aa6.05□□□□□ -1.44
PRKDC-205ENST00000535375 ASIC5Q9NY37 505 aa6.05□□□□□ -1.44
PRKDC-205ENST00000535375 WDR17Q8IZU2 1322 aa6.04□□□□□ -1.44
PRKDC-205ENST00000535375 TCRBV5S1A1TA0A578 114 aa6.04□□□□□ -1.44
PRKDC-205ENST00000535375 WDR91A4D1P6 747 aa6.04□□□□□ -1.44
PRKDC-205ENST00000535375 APOL1O14791 398 aa6.04□□□□□ -1.44
PRKDC-205ENST00000535375 TMEM225BP0DP42 221 aa6.04□□□□□ -1.44
PRKDC-205ENST00000535375 CYP2A6P11509 494 aaPredicted RBP6.04□□□□□ -1.44
PRKDC-205ENST00000535375 MYL4P12829 197 aa6.04□□□□□ -1.44
PRKDC-205ENST00000535375 SLC5A1P13866 664 aa6.04□□□□□ -1.44
PRKDC-205ENST00000535375 ADRA1DP25100 572 aa6.04□□□□□ -1.44
PRKDC-205ENST00000535375 FAXCQ5TGI0 409 aa6.04□□□□□ -1.44
PRKDC-205ENST00000535375 VSTM1Q6UX27 236 aa6.04□□□□□ -1.44
PRKDC-205ENST00000535375 DCDC5Q6ZRR9 648 aa6.04□□□□□ -1.44
PRKDC-205ENST00000535375 NEK8Q86SG6 692 aa6.04□□□□□ -1.44
PRKDC-205ENST00000535375 CNGA4Q8IV77 575 aa6.04□□□□□ -1.44
PRKDC-205ENST00000535375 P3H2Q8IVL5 708 aa6.04□□□□□ -1.44
PRKDC-205ENST00000535375 FAM71DQ8N9W8 422 aa6.04□□□□□ -1.44
PRKDC-205ENST00000535375 C8orf58Q8NAV2 365 aa6.04□□□□□ -1.44
PRKDC-205ENST00000535375 MAFAQ8NHW3 353 aaPredicted RBP6.04□□□□□ -1.44
PRKDC-205ENST00000535375 MBD3L2Q8NHZ7 208 aaPredicted RBP6.04□□□□□ -1.44
PRKDC-205ENST00000535375 QTRT1Q9BXR0 403 aaKnown RBP6.04□□□□□ -1.44
PRKDC-205ENST00000535375 ZBTB26Q9HCK0 441 aa6.04□□□□□ -1.44
PRKDC-205ENST00000535375 TMOD4Q9NZQ9 345 aa6.04□□□□□ -1.44
PRKDC-205ENST00000535375 CLCA1A8K7I4 914 aa6.03□□□□□ -1.44
PRKDC-205ENST00000535375 ADAMTS3O15072 1205 aa6.03□□□□□ -1.44
PRKDC-205ENST00000535375 APEHP13798 732 aaKnown RBP6.03□□□□□ -1.44
PRKDC-205ENST00000535375 TSHRP16473 764 aa6.03□□□□□ -1.44
PRKDC-205ENST00000535375 FGFR2P21802 821 aa6.03□□□□□ -1.44
PRKDC-205ENST00000535375 MCM5P33992 734 aa6.03□□□□□ -1.44
PRKDC-205ENST00000535375 GNALP38405 381 aa6.03□□□□□ -1.44
PRKDC-205ENST00000535375 CASP5P51878 434 aa6.03□□□□□ -1.44
PRKDC-205ENST00000535375 TXNL4AP83876 142 aaKnown RBP6.03□□□□□ -1.44
PRKDC-205ENST00000535375 ZNF268Q14587 947 aaPredicted RBP6.03□□□□□ -1.44
PRKDC-205ENST00000535375 ZNF626Q68DY1 528 aa6.03□□□□□ -1.44
PRKDC-205ENST00000535375 TXLNBQ8N3L3 684 aa6.03□□□□□ -1.44
PRKDC-205ENST00000535375 GALNT16Q8N428 558 aa6.03□□□□□ -1.44
PRKDC-205ENST00000535375 C12orf76Q8N812 135 aaPredicted RBP6.03□□□□□ -1.44
PRKDC-205ENST00000535375 PNPLA1Q8N8W4 532 aa6.03□□□□□ -1.44
PRKDC-205ENST00000535375 ABHD5Q8WTS1 349 aa6.03□□□□□ -1.44
PRKDC-205ENST00000535375 ZC3H10Q96K80 434 aaKnown RBP6.03□□□□□ -1.44
PRKDC-205ENST00000535375 CINPQ9BW66 212 aaPredicted RBP6.03□□□□□ -1.44
PRKDC-205ENST00000535375 STARD7Q9NQZ5 370 aa6.03□□□□□ -1.44
PRKDC-205ENST00000535375 VPS51Q9UID3 782 aa6.03□□□□□ -1.44
PRKDC-205ENST00000535375 MAFFQ9ULX9 164 aa6.03□□□□□ -1.44
PRKDC-205ENST00000535375 TNFRSF18Q9Y5U5 241 aa6.03□□□□□ -1.44
PRKDC-205ENST00000535375 ZNF804BA4D1E1 1349 aa6.02□□□□□ -1.45
PRKDC-205ENST00000535375 ARHGEF17Q96PE2 2063 aaPredicted RBP6.02□□□□□ -1.45
PRKDC-205ENST00000535375 DSCR3O14972 297 aa6.02□□□□□ -1.45
PRKDC-205ENST00000535375 PRC1O43663 620 aa6.02□□□□□ -1.45
PRKDC-205ENST00000535375 MYL3P08590 195 aa6.02□□□□□ -1.45
PRKDC-205ENST00000535375 COPAP53621 1224 aa6.02□□□□□ -1.45
PRKDC-205ENST00000535375 CFHR3Q02985 330 aa6.02□□□□□ -1.45
PRKDC-205ENST00000535375 GPS1Q13098 491 aa6.02□□□□□ -1.45
PRKDC-205ENST00000535375 KCNB1Q14721 858 aa6.02□□□□□ -1.45
PRKDC-205ENST00000535375 LARS2Q15031 903 aaKnown RBP6.02□□□□□ -1.45
PRKDC-205ENST00000535375 ARL13BQ3SXY8 428 aa6.02□□□□□ -1.45
PRKDC-205ENST00000535375 CC2D1BQ5T0F9 858 aaKnown RBP6.02□□□□□ -1.45
PRKDC-205ENST00000535375 USP17L6PQ6QN14 398 aa6.02□□□□□ -1.45
PRKDC-205ENST00000535375 CRTC1Q6UUV9 634 aa6.02□□□□□ -1.45
PRKDC-205ENST00000535375 ZNF813Q6ZN06 617 aa6.02□□□□□ -1.45
PRKDC-205ENST00000535375 DPP9Q86TI2 863 aa6.02□□□□□ -1.45
PRKDC-205ENST00000535375 SMG7Q92540 1137 aaKnown RBP6.02□□□□□ -1.45
PRKDC-205ENST00000535375 EFHD1Q9BUP0 239 aa6.02□□□□□ -1.45
PRKDC-205ENST00000535375 SELENOOQ9BVL4 669 aa6.02□□□□□ -1.45
PRKDC-205ENST00000535375 COLEC11Q9BWP8 271 aa6.02□□□□□ -1.45
PRKDC-205ENST00000535375 NAA15Q9BXJ9 866 aaKnown RBP6.02□□□□□ -1.45
PRKDC-205ENST00000535375 PDGFCQ9NRA1 345 aa6.02□□□□□ -1.45
PRKDC-205ENST00000535375 MYO1AQ9UBC5 1043 aa6.02□□□□□ -1.45
PRKDC-205ENST00000535375 COL15A1P39059 1388 aa6.02□□□□□ -1.45
PRKDC-205ENST00000535375 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.01□□□□□ -1.45
PRKDC-205ENST00000535375 ANO9A1A5B4 782 aa6.01□□□□□ -1.45
PRKDC-205ENST00000535375 CA12O43570 354 aa6.01□□□□□ -1.45
PRKDC-205ENST00000535375 WDR47O94967 919 aa6.01□□□□□ -1.45
PRKDC-205ENST00000535375 ARHGAP25P42331 645 aa6.01□□□□□ -1.45
PRKDC-205ENST00000535375 ZNF81P51508 661 aa6.01□□□□□ -1.45
PRKDC-205ENST00000535375 DEUP1Q05D60 604 aa6.01□□□□□ -1.45
PRKDC-205ENST00000535375 CCDC15Q0P6D6 951 aa6.01□□□□□ -1.45
PRKDC-205ENST00000535375 MFSD13AQ14CX5 517 aa6.01□□□□□ -1.45
PRKDC-205ENST00000535375 SUPT20HL1Q3ZLR7 823 aa6.01□□□□□ -1.45
PRKDC-205ENST00000535375 RANBP10Q6VN20 620 aa6.01□□□□□ -1.45
PRKDC-205ENST00000535375 RNF152Q8N8N0 203 aa6.01□□□□□ -1.45
PRKDC-205ENST00000535375 SNX27Q96L92 541 aa6.01□□□□□ -1.45
PRKDC-205ENST00000535375 FAM118BQ9BPY3 351 aa6.01□□□□□ -1.45
PRKDC-205ENST00000535375 EIF2AQ9BY44 585 aaKnown RBP6.01□□□□□ -1.45
PRKDC-205ENST00000535375 RNF7Q9UBF6 113 aa6.01□□□□□ -1.45
PRKDC-205ENST00000535375 ASAP1Q9ULH1 1129 aa6.01□□□□□ -1.45
PRKDC-205ENST00000535375 CEP83Q9Y592 693 aa6.01□□□□□ -1.45
PRKDC-205ENST00000535375 FNDC1Q4ZHG4 1894 aaPredicted RBP6□□□□□ -1.45
PRKDC-205ENST00000535375 SMIM35A0A1B0GVV1 85 aa6□□□□□ -1.45
PRKDC-205ENST00000535375 A0A1W2PPC4 97 aa6□□□□□ -1.45
PRKDC-205ENST00000535375 KCNU1A8MYU2 1149 aa6□□□□□ -1.45
PRKDC-205ENST00000535375 CLIC1O00299 241 aa6□□□□□ -1.45
PRKDC-205ENST00000535375 MYL1P05976 194 aa6□□□□□ -1.45
PRKDC-205ENST00000535375 DGKQP52824 942 aa6□□□□□ -1.45
PRKDC-205ENST00000535375 PICALMQ13492 652 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms