RNA–Protein interactions for RNA: ENST00000531290.5

TRAPPC4-210, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,135 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-210ENST00000531290 CYLDQ9NQC7 956 aa23.5■■□□□ 1.35
TRAPPC4-210ENST00000531290 RAB20Q9NX57 234 aa23.5■■□□□ 1.35
TRAPPC4-210ENST00000531290 LSM7Q9UK45 103 aaKnown RBP23.5■■□□□ 1.35
TRAPPC4-210ENST00000531290 ZNF638Q14966 1978 aaKnown RBP23.5■■□□□ 1.35
TRAPPC4-210ENST00000531290 MXI1P50539 228 aa23.49■■□□□ 1.35
TRAPPC4-210ENST00000531290 CREB5Q02930 508 aa23.49■■□□□ 1.35
TRAPPC4-210ENST00000531290 PLA2G2CQ5R387 149 aa23.49■■□□□ 1.35
TRAPPC4-210ENST00000531290 RASSF3Q86WH2 238 aa23.49■■□□□ 1.35
TRAPPC4-210ENST00000531290 FBXL13Q8NEE6 735 aa23.49■■□□□ 1.35
TRAPPC4-210ENST00000531290 DDX1Q92499 740 aaKnown RBP23.49■■□□□ 1.35
TRAPPC4-210ENST00000531290 WBP2Q969T9 261 aa23.49■■□□□ 1.35
TRAPPC4-210ENST00000531290 TSG101Q99816 390 aa23.49■■□□□ 1.35
TRAPPC4-210ENST00000531290 DUSP16Q9BY84 665 aa23.49■■□□□ 1.35
TRAPPC4-210ENST00000531290 POLMQ9NP87 494 aaPredicted RBP23.49■■□□□ 1.35
TRAPPC4-210ENST00000531290 A0A1W2PQH9 124 aa23.48■■□□□ 1.35
TRAPPC4-210ENST00000531290 SGK1O00141 431 aa23.48■■□□□ 1.35
TRAPPC4-210ENST00000531290 TULP3O75386 442 aa23.48■■□□□ 1.35
TRAPPC4-210ENST00000531290 SMC2O95347 1197 aa23.48■■□□□ 1.35
TRAPPC4-210ENST00000531290 RARGP13631 454 aa23.48■■□□□ 1.35
TRAPPC4-210ENST00000531290 KIR2DL1P43626 348 aaPredicted RBP23.48■■□□□ 1.35
TRAPPC4-210ENST00000531290 KIF11P52732 1056 aa23.48■■□□□ 1.35
TRAPPC4-210ENST00000531290 MCCD1P59942 119 aaPredicted RBP23.48■■□□□ 1.35
TRAPPC4-210ENST00000531290 PPP1R26Q5T8A7 1209 aaPredicted RBP23.48■■□□□ 1.35
TRAPPC4-210ENST00000531290 TMEM92Q6UXU6 159 aa23.48■■□□□ 1.35
TRAPPC4-210ENST00000531290 TADA2BQ86TJ2 420 aa23.48■■□□□ 1.35
TRAPPC4-210ENST00000531290 ETFBKMTQ8IXQ9 262 aa23.48■■□□□ 1.35
TRAPPC4-210ENST00000531290 FMR1NBQ8N0W7 255 aaPredicted RBP23.48■■□□□ 1.35
TRAPPC4-210ENST00000531290 MDGA1Q8NFP4 955 aa23.48■■□□□ 1.35
TRAPPC4-210ENST00000531290 SEMA4DQ92854 862 aa23.48■■□□□ 1.35
TRAPPC4-210ENST00000531290 OSER1Q9NX31 292 aa23.48■■□□□ 1.35
TRAPPC4-210ENST00000531290 DNMT3LQ9UJW3 386 aa23.48■■□□□ 1.35
TRAPPC4-210ENST00000531290 NAGPAQ9UK23 515 aa23.48■■□□□ 1.35
TRAPPC4-210ENST00000531290 CAVIN2O95810 425 aa23.47■■□□□ 1.35
TRAPPC4-210ENST00000531290 PRCPP42785 496 aa23.47■■□□□ 1.35
TRAPPC4-210ENST00000531290 PLA2G4AP47712 749 aa23.47■■□□□ 1.35
TRAPPC4-210ENST00000531290 PSEN1P49768 467 aa23.47■■□□□ 1.35
TRAPPC4-210ENST00000531290 LIMK1P53667 647 aa23.47■■□□□ 1.35
TRAPPC4-210ENST00000531290 PPM1JQ5JR12 505 aa23.47■■□□□ 1.35
TRAPPC4-210ENST00000531290 C10orf120Q5SQS8 335 aa23.47■■□□□ 1.35
TRAPPC4-210ENST00000531290 ZNF658Q5TYW1 1059 aaPredicted RBP23.47■■□□□ 1.35
TRAPPC4-210ENST00000531290 TCERG1LQ5VWI1 586 aa23.47■■□□□ 1.35
TRAPPC4-210ENST00000531290 KLHDC10Q6PID8 442 aa23.47■■□□□ 1.35
TRAPPC4-210ENST00000531290 TRMT11Q7Z4G4 463 aaKnown RBP23.47■■□□□ 1.35
TRAPPC4-210ENST00000531290 PHTF2Q8N3S3 785 aa23.47■■□□□ 1.35
TRAPPC4-210ENST00000531290 KCNV2Q8TDN2 545 aa23.47■■□□□ 1.35
TRAPPC4-210ENST00000531290 TMEM176AQ96HP8 235 aa23.47■■□□□ 1.35
TRAPPC4-210ENST00000531290 GSDMAQ96QA5 445 aa23.47■■□□□ 1.35
TRAPPC4-210ENST00000531290 XPO6Q96QU8 1125 aaKnown RBP23.47■■□□□ 1.35
TRAPPC4-210ENST00000531290 SMOC1Q9H4F8 434 aa23.47■■□□□ 1.35
TRAPPC4-210ENST00000531290 NMUR1Q9HB89 426 aa23.47■■□□□ 1.35
TRAPPC4-210ENST00000531290 CISHQ9NSE2 258 aa23.47■■□□□ 1.35
TRAPPC4-210ENST00000531290 MTPAPQ9NVV4 582 aaKnown RBP eCLIP23.47■■□□□ 1.35
TRAPPC4-210ENST00000531290 BCCIPQ9P287 314 aaKnown RBP eCLIP23.47■■□□□ 1.35
TRAPPC4-210ENST00000531290 WDR35Q9P2L0 1181 aa23.47■■□□□ 1.35
TRAPPC4-210ENST00000531290 HOOK1Q9UJC3 728 aaKnown RBP23.47■■□□□ 1.35
TRAPPC4-210ENST00000531290 CIZ1Q9ULV3 898 aaPredicted RBP23.47■■□□□ 1.35
TRAPPC4-210ENST00000531290 RALAP11233 206 aa23.46■■□□□ 1.35
TRAPPC4-210ENST00000531290 PTPRDP23468 1912 aa23.46■■□□□ 1.35
TRAPPC4-210ENST00000531290 GREB1Q4ZG55 1949 aa23.46■■□□□ 1.35
TRAPPC4-210ENST00000531290 BBS2Q9BXC9 721 aa23.46■■□□□ 1.35
TRAPPC4-210ENST00000531290 GTPBP4Q9BZE4 634 aaKnown RBP23.46■■□□□ 1.35
TRAPPC4-210ENST00000531290 ANAPC1Q9H1A4 1944 aa23.46■■□□□ 1.35
TRAPPC4-210ENST00000531290 RXFP3Q9NSD7 469 aa23.46■■□□□ 1.35
TRAPPC4-210ENST00000531290 NUDT5Q9UKK9 219 aa23.46■■□□□ 1.35
TRAPPC4-210ENST00000531290 BCLAF3A2AJT9 711 aaKnown RBP23.45■■□□□ 1.34
TRAPPC4-210ENST00000531290 GREM1O60565 184 aa23.45■■□□□ 1.34
TRAPPC4-210ENST00000531290 HNRNPLP14866 589 aaKnown RBP eCLIP23.45■■□□□ 1.34
TRAPPC4-210ENST00000531290 KCNA4P22459 653 aa23.45■■□□□ 1.34
TRAPPC4-210ENST00000531290 SLC8A3P57103 927 aa23.45■■□□□ 1.34
TRAPPC4-210ENST00000531290 FKBP3Q00688 224 aaKnown RBP23.45■■□□□ 1.34
TRAPPC4-210ENST00000531290 DCAF17Q5H9S7 520 aaPredicted RBP23.45■■□□□ 1.34
TRAPPC4-210ENST00000531290 C10orf76Q5T2E6 689 aa23.45■■□□□ 1.34
TRAPPC4-210ENST00000531290 STPG1Q5TH74 334 aa23.45■■□□□ 1.34
TRAPPC4-210ENST00000531290 GRAMD4Q6IC98 578 aa23.45■■□□□ 1.34
TRAPPC4-210ENST00000531290 TPGS1Q6ZTW0 290 aa23.45■■□□□ 1.34
TRAPPC4-210ENST00000531290 CCDC186Q7Z3E2 898 aa23.45■■□□□ 1.34
TRAPPC4-210ENST00000531290 PGBD3Q8N328 593 aa23.45■■□□□ 1.34
TRAPPC4-210ENST00000531290 ZNF513Q8N8E2 541 aaPredicted RBP23.45■■□□□ 1.34
TRAPPC4-210ENST00000531290 TERB1Q8NA31 727 aa23.45■■□□□ 1.34
TRAPPC4-210ENST00000531290 SMARCE1Q969G3 411 aa23.45■■□□□ 1.34
TRAPPC4-210ENST00000531290 CDK5RAP1Q96SZ6 601 aaKnown RBP23.45■■□□□ 1.34
TRAPPC4-210ENST00000531290 FAM124BQ9H5Z6 455 aaPredicted RBP23.45■■□□□ 1.34
TRAPPC4-210ENST00000531290 ZDHHC4Q9NPG8 344 aa23.45■■□□□ 1.34
TRAPPC4-210ENST00000531290 DNAJC17Q9NVM6 304 aaKnown RBP23.45■■□□□ 1.34
TRAPPC4-210ENST00000531290 NEDD8-MDP1E9PL57 170 aa23.44■■□□□ 1.34
TRAPPC4-210ENST00000531290 MDM4O15151 490 aa23.44■■□□□ 1.34
TRAPPC4-210ENST00000531290 SLC16A3O15427 465 aaKnown RBP23.44■■□□□ 1.34
TRAPPC4-210ENST00000531290 MAP3K13O43283 966 aa23.44■■□□□ 1.34
TRAPPC4-210ENST00000531290 ADAM23O75077 832 aa23.44■■□□□ 1.34
TRAPPC4-210ENST00000531290 BYSLQ13895 437 aaKnown RBP23.44■■□□□ 1.34
TRAPPC4-210ENST00000531290 COBLL1Q53SF7 1204 aa23.44■■□□□ 1.34
TRAPPC4-210ENST00000531290 PMS2CLQ68D20 193 aa23.44■■□□□ 1.34
TRAPPC4-210ENST00000531290 SCD5Q86SK9 330 aa23.44■■□□□ 1.34
TRAPPC4-210ENST00000531290 SLC4A11Q8NBS3 891 aa23.44■■□□□ 1.34
TRAPPC4-210ENST00000531290 TATDN2Q93075 761 aa23.44■■□□□ 1.34
TRAPPC4-210ENST00000531290 SPACA7Q96KW9 195 aa23.44■■□□□ 1.34
TRAPPC4-210ENST00000531290 UBXN6Q9BZV1 441 aa23.44■■□□□ 1.34
TRAPPC4-210ENST00000531290 CLIC5Q9NZA1 410 aa23.44■■□□□ 1.34
TRAPPC4-210ENST00000531290 USP3Q9Y6I4 520 aa23.44■■□□□ 1.34
TRAPPC4-210ENST00000531290 NCOR2Q9Y618 2525 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms