RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 RHOBTB3O94955 611 aa23.63■■□□□ 1.37
TRAPPC4-208ENST00000527680 TRIM49P0CI25 452 aa23.63■■□□□ 1.37
TRAPPC4-208ENST00000527680 TRIM49CP0CI26 452 aa23.63■■□□□ 1.37
TRAPPC4-208ENST00000527680 CD58P19256 250 aa23.63■■□□□ 1.37
TRAPPC4-208ENST00000527680 ACO1P21399 889 aaKnown RBP23.63■■□□□ 1.37
TRAPPC4-208ENST00000527680 PGFP49763 221 aa23.63■■□□□ 1.37
TRAPPC4-208ENST00000527680 ADAM9Q13443 819 aa23.63■■□□□ 1.37
TRAPPC4-208ENST00000527680 N4BP2L1Q5TBK1 243 aaPredicted RBP23.63■■□□□ 1.37
TRAPPC4-208ENST00000527680 FAM186BQ8IYM0 893 aa23.63■■□□□ 1.37
TRAPPC4-208ENST00000527680 ZNF513Q8N8E2 541 aaPredicted RBP23.63■■□□□ 1.37
TRAPPC4-208ENST00000527680 PIGKQ92643 395 aa23.63■■□□□ 1.37
TRAPPC4-208ENST00000527680 LSM14BQ9BX40 385 aaKnown RBP23.63■■□□□ 1.37
TRAPPC4-208ENST00000527680 CYP3A43Q9HB55 503 aa23.63■■□□□ 1.37
TRAPPC4-208ENST00000527680 LSM7Q9UK45 103 aaKnown RBP23.63■■□□□ 1.37
TRAPPC4-208ENST00000527680 TCRBV21S2A2A0A5A6 115 aa23.62■■□□□ 1.37
TRAPPC4-208ENST00000527680 HOXC11O43248 304 aaPredicted RBP23.62■■□□□ 1.37
TRAPPC4-208ENST00000527680 PSMC2P35998 433 aaKnown RBP23.62■■□□□ 1.37
TRAPPC4-208ENST00000527680 BYSLQ13895 437 aaKnown RBP23.62■■□□□ 1.37
TRAPPC4-208ENST00000527680 C10orf76Q5T2E6 689 aa23.62■■□□□ 1.37
TRAPPC4-208ENST00000527680 LPCAT2Q7L5N7 544 aa23.62■■□□□ 1.37
TRAPPC4-208ENST00000527680 TRMT11Q7Z4G4 463 aaKnown RBP23.62■■□□□ 1.37
TRAPPC4-208ENST00000527680 TAS1R2Q8TE23 839 aa23.62■■□□□ 1.37
TRAPPC4-208ENST00000527680 XPO6Q96QU8 1125 aaKnown RBP23.62■■□□□ 1.37
TRAPPC4-208ENST00000527680 TWNKQ96RR1 684 aa23.62■■□□□ 1.37
TRAPPC4-208ENST00000527680 KLF16Q9BXK1 252 aaPredicted RBP23.62■■□□□ 1.37
TRAPPC4-208ENST00000527680 SCML2Q9UQR0 700 aa23.62■■□□□ 1.37
TRAPPC4-208ENST00000527680 ZBTB24O43167 697 aaPredicted RBP23.61■■□□□ 1.37
TRAPPC4-208ENST00000527680 ADAM23O75077 832 aa23.61■■□□□ 1.37
TRAPPC4-208ENST00000527680 PPP3CAQ08209 521 aa23.61■■□□□ 1.37
TRAPPC4-208ENST00000527680 DPYDQ12882 1025 aa23.61■■□□□ 1.37
TRAPPC4-208ENST00000527680 DAB2IPQ5VWQ8 1189 aa23.61■■□□□ 1.37
TRAPPC4-208ENST00000527680 TPGS1Q6ZTW0 290 aa23.61■■□□□ 1.37
TRAPPC4-208ENST00000527680 CLEC20AQ6ZU45 233 aa23.61■■□□□ 1.37
TRAPPC4-208ENST00000527680 HTR3DQ70Z44 454 aa23.61■■□□□ 1.37
TRAPPC4-208ENST00000527680 GPRIN1Q7Z2K8 1008 aa23.61■■□□□ 1.37
TRAPPC4-208ENST00000527680 ETFBKMTQ8IXQ9 262 aa23.61■■□□□ 1.37
TRAPPC4-208ENST00000527680 PHTF2Q8N3S3 785 aa23.61■■□□□ 1.37
TRAPPC4-208ENST00000527680 KCNV2Q8TDN2 545 aa23.61■■□□□ 1.37
TRAPPC4-208ENST00000527680 BBS2Q9BXC9 721 aa23.61■■□□□ 1.37
TRAPPC4-208ENST00000527680 APOBEC3GQ9HC16 384 aaKnown RBP23.61■■□□□ 1.37
TRAPPC4-208ENST00000527680 DNAJC17Q9NVM6 304 aaKnown RBP23.61■■□□□ 1.37
TRAPPC4-208ENST00000527680 NUDT5Q9UKK9 219 aa23.61■■□□□ 1.37
TRAPPC4-208ENST00000527680 ATP6V1DQ9Y5K8 247 aa23.61■■□□□ 1.37
TRAPPC4-208ENST00000527680 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa23.6■■□□□ 1.37
TRAPPC4-208ENST00000527680 NEDD8-MDP1E9PL57 170 aa23.6■■□□□ 1.37
TRAPPC4-208ENST00000527680 CYP26A1O43174 497 aa23.6■■□□□ 1.37
TRAPPC4-208ENST00000527680 KCNK5O95279 499 aa23.6■■□□□ 1.37
TRAPPC4-208ENST00000527680 RARGP13631 454 aa23.6■■□□□ 1.37
TRAPPC4-208ENST00000527680 P2RY2P41231 377 aa23.6■■□□□ 1.37
TRAPPC4-208ENST00000527680 WASP42768 502 aa23.6■■□□□ 1.37
TRAPPC4-208ENST00000527680 INCA1Q0VD86 236 aa23.6■■□□□ 1.37
TRAPPC4-208ENST00000527680 NFIL3Q16649 462 aa23.6■■□□□ 1.37
TRAPPC4-208ENST00000527680 ZNF394Q53GI3 561 aa23.6■■□□□ 1.37
TRAPPC4-208ENST00000527680 GRAMD4Q6IC98 578 aa23.6■■□□□ 1.37
TRAPPC4-208ENST00000527680 SDE2Q6IQ49 451 aa23.6■■□□□ 1.37
TRAPPC4-208ENST00000527680 KRBA2Q6ZNG9 492 aa23.6■■□□□ 1.37
TRAPPC4-208ENST00000527680 ARMCX6Q7L4S7 300 aa23.6■■□□□ 1.37
TRAPPC4-208ENST00000527680 TMEFF1Q8IYR6 380 aa23.6■■□□□ 1.37
TRAPPC4-208ENST00000527680 OLIG1Q8TAK6 271 aa23.6■■□□□ 1.37
TRAPPC4-208ENST00000527680 HEXIM2Q96MH2 286 aaKnown RBP23.6■■□□□ 1.37
TRAPPC4-208ENST00000527680 NIF3L1Q9GZT8 377 aa23.6■■□□□ 1.37
TRAPPC4-208ENST00000527680 SCAND2PQ9GZW5 306 aaPredicted RBP23.6■■□□□ 1.37
TRAPPC4-208ENST00000527680 WDR35Q9P2L0 1181 aa23.6■■□□□ 1.37
TRAPPC4-208ENST00000527680 ZDHHC9Q9Y397 364 aa23.6■■□□□ 1.37
TRAPPC4-208ENST00000527680 ACACBO00763 2458 aa23.59■■□□□ 1.37
TRAPPC4-208ENST00000527680 GON4LQ3T8J9 2241 aa23.59■■□□□ 1.37
TRAPPC4-208ENST00000527680 A0A1W2PQH9 124 aa23.59■■□□□ 1.37
TRAPPC4-208ENST00000527680 LNP1A1A4G5 178 aa23.59■■□□□ 1.37
TRAPPC4-208ENST00000527680 PATE3B3GLJ2 98 aa23.59■■□□□ 1.37
TRAPPC4-208ENST00000527680 TRIM24O15164 1050 aa23.59■■□□□ 1.37
TRAPPC4-208ENST00000527680 PLA2G4AP47712 749 aa23.59■■□□□ 1.37
TRAPPC4-208ENST00000527680 C10orf120Q5SQS8 335 aa23.59■■□□□ 1.37
TRAPPC4-208ENST00000527680 GUF1Q8N442 669 aaKnown RBP23.59■■□□□ 1.37
TRAPPC4-208ENST00000527680 FRMD1Q8N878 549 aa23.59■■□□□ 1.37
TRAPPC4-208ENST00000527680 TERB1Q8NA31 727 aa23.59■■□□□ 1.37
TRAPPC4-208ENST00000527680 CCDC34Q96HJ3 373 aa23.59■■□□□ 1.37
TRAPPC4-208ENST00000527680 DUSP9Q99956 384 aaKnown RBP23.59■■□□□ 1.37
TRAPPC4-208ENST00000527680 TMEM8AQ9HCN3 771 aa23.59■■□□□ 1.37
TRAPPC4-208ENST00000527680 CYLDQ9NQC7 956 aa23.59■■□□□ 1.37
TRAPPC4-208ENST00000527680 OSER1Q9NX31 292 aa23.59■■□□□ 1.37
TRAPPC4-208ENST00000527680 DNMT3LQ9UJW3 386 aa23.59■■□□□ 1.37
TRAPPC4-208ENST00000527680 NAGPAQ9UK23 515 aa23.59■■□□□ 1.37
TRAPPC4-208ENST00000527680 ANGPTL2Q9UKU9 493 aa23.59■■□□□ 1.37
TRAPPC4-208ENST00000527680 PCDHA5Q9Y5H7 936 aa23.59■■□□□ 1.37
TRAPPC4-208ENST00000527680 HHLA1C9JL84 531 aa23.58■■□□□ 1.37
TRAPPC4-208ENST00000527680 MDM4O15151 490 aa23.58■■□□□ 1.37
TRAPPC4-208ENST00000527680 ZNF202O95125 648 aa23.58■■□□□ 1.37
TRAPPC4-208ENST00000527680 TYRP14679 529 aa23.58■■□□□ 1.37
TRAPPC4-208ENST00000527680 NTSR1P30989 418 aa23.58■■□□□ 1.37
TRAPPC4-208ENST00000527680 IRX4P78413 519 aa23.58■■□□□ 1.37
TRAPPC4-208ENST00000527680 PSAPL1Q6NUJ1 521 aa23.58■■□□□ 1.37
TRAPPC4-208ENST00000527680 NMUR1Q9HB89 426 aa23.58■■□□□ 1.37
TRAPPC4-208ENST00000527680 TMEM9BQ9NQ34 198 aa23.58■■□□□ 1.37
TRAPPC4-208ENST00000527680 CACNA1BQ00975 2339 aa23.58■■□□□ 1.36
TRAPPC4-208ENST00000527680 FAM237AA0A1B0GTK4 181 aa23.57■■□□□ 1.36
TRAPPC4-208ENST00000527680 CILPO75339 1184 aa23.57■■□□□ 1.36
TRAPPC4-208ENST00000527680 RALAP11233 206 aa23.57■■□□□ 1.36
TRAPPC4-208ENST00000527680 HOXB2P14652 356 aa23.57■■□□□ 1.36
TRAPPC4-208ENST00000527680 UAP1L1Q3KQV9 507 aa23.57■■□□□ 1.36
TRAPPC4-208ENST00000527680 PPP1R26Q5T8A7 1209 aaPredicted RBP23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms