RNA–Protein interactions for RNA: ENST00000516146.1

RNU6-27P-201, Transcript of RNA, U6 small nuclear 27, pseudogene, humanhuman

BASIC

Gene RNU6-27P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-27P-201ENST00000516146 DCLRE1CQ96SD1 692 aaKnown RBP4.2□□□□□ -1.74
RNU6-27P-201ENST00000516146 OSBPL9Q96SU4 736 aa4.2□□□□□ -1.74
RNU6-27P-201ENST00000516146 PAAF1Q9BRP4 392 aa4.2□□□□□ -1.74
RNU6-27P-201ENST00000516146 VN1R3Q9BXE9 311 aa4.2□□□□□ -1.74
RNU6-27P-201ENST00000516146 CCDC68Q9H2F9 335 aa4.2□□□□□ -1.74
RNU6-27P-201ENST00000516146 TRIM36Q9NQ86 728 aa4.2□□□□□ -1.74
RNU6-27P-201ENST00000516146 KCNE5Q9UJ90 142 aa4.2□□□□□ -1.74
RNU6-27P-201ENST00000516146 GPR34Q9UPC5 381 aa4.2□□□□□ -1.74
RNU6-27P-201ENST00000516146 SMG5Q9UPR3 1016 aaKnown RBP4.2□□□□□ -1.74
RNU6-27P-201ENST00000516146 SLC27A6Q9Y2P4 619 aa4.2□□□□□ -1.74
RNU6-27P-201ENST00000516146 USP15Q9Y4E8 981 aaPredicted RBP4.2□□□□□ -1.74
RNU6-27P-201ENST00000516146 CYP46A1Q9Y6A2 500 aa4.2□□□□□ -1.74
RNU6-27P-201ENST00000516146 PI4KAP2A4QPH2 592 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 FAM90A20PA6NIJ5 464 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 CYP27B1O15528 508 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 HNRNPRO43390 633 aaKnown RBP4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 ANP32CO43423 234 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 WDR47O94967 919 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 SCGB1D1O95968 90 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 LMNAP02545 664 aaKnown RBP4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 CSF1RP07333 972 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 TNNT1P13805 278 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 ADORA2AP29274 412 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 MSX2P35548 267 aaPredicted RBP4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 STAT1P42224 750 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 RAD52P43351 418 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 KCNC1P48547 511 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 POLD2P49005 469 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 MAN2A2P49641 1150 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 CCR9P51686 369 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 DGKQP52824 942 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 EPHB4P54760 987 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 SLURP1P55000 103 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 RNASE9P60153 205 aaKnown RBP4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 RNASELQ05823 741 aaKnown RBP4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 FPGSQ05932 587 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 GALNT2Q10471 571 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 TUBB3Q13509 450 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 ACOX1Q15067 660 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 ST3GAL2Q16842 350 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 FAM133BQ5BKY9 247 aaKnown RBP4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 TMEM196Q5HYL7 178 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 UBXN11Q5T124 520 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 RBM20Q5T481 1227 aaKnown RBP4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 DEPDC1Q5TB30 811 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 MSANTD2Q6P1R3 559 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 B4GALNT4Q76KP1 1039 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 TMPRSS9Q7Z410 1059 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 CHD1LQ86WJ1 897 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 ADGRG5Q8IZF4 528 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 ABRAQ8N0Z2 381 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 OVCA2Q8WZ82 227 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 STAMQ92783 540 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 FAM136AQ96C01 138 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 RSRC1Q96IZ7 334 aaKnown RBP4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 FAR2Q96K12 515 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 ZBTB45Q96K62 511 aaPredicted RBP4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 PIGSQ96S52 555 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 GPR20Q99678 358 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 ZSWIM1Q9BR11 485 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 LMAN2LQ9H0V9 348 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 FBXO28Q9NVF7 368 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 NKX1-2Q9UD57 310 aaPredicted RBP4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 EIF2B4Q9UI10 523 aaKnown RBP4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 CNOT7Q9UIV1 285 aaKnown RBP4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 SERTAD3Q9UJW9 196 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 RIMKLBQ9ULI2 386 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 ZBTB1Q9Y2K1 713 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 GDAQ9Y2T3 454 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 UBE2J1Q9Y385 318 aaPredicted RBP4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 SLC30A1Q9Y6M5 507 aa4.19□□□□□ -1.74
RNU6-27P-201ENST00000516146 GXYLT2A0PJZ3 443 aa4.18□□□□□ -1.74
RNU6-27P-201ENST00000516146 CCDC78A2IDD5 438 aa4.18□□□□□ -1.74
RNU6-27P-201ENST00000516146 MBD3L5A6NJ08 208 aaPredicted RBP4.18□□□□□ -1.74
RNU6-27P-201ENST00000516146 SLC38A8A6NNN8 435 aa4.18□□□□□ -1.74
RNU6-27P-201ENST00000516146 CAPN14A8MX76 684 aa4.18□□□□□ -1.74
RNU6-27P-201ENST00000516146 ADM5C9JUS6 153 aa4.18□□□□□ -1.74
RNU6-27P-201ENST00000516146 CCER2I3L3R5 266 aa4.18□□□□□ -1.74
RNU6-27P-201ENST00000516146 AGPSO00116 658 aa4.18□□□□□ -1.74
RNU6-27P-201ENST00000516146 PSMD9O00233 223 aa4.18□□□□□ -1.74
RNU6-27P-201ENST00000516146 LEFTY2O00292 366 aa4.18□□□□□ -1.74
RNU6-27P-201ENST00000516146 TSPAN4O14817 238 aa4.18□□□□□ -1.74
RNU6-27P-201ENST00000516146 SPTLC2O15270 562 aa4.18□□□□□ -1.74
RNU6-27P-201ENST00000516146 LAMTOR5O43504 91 aa4.18□□□□□ -1.74
RNU6-27P-201ENST00000516146 ORC4O43929 436 aa4.18□□□□□ -1.74
RNU6-27P-201ENST00000516146 NOBOXO60393 691 aa4.18□□□□□ -1.74
RNU6-27P-201ENST00000516146 RAD17O75943 681 aa4.18□□□□□ -1.74
RNU6-27P-201ENST00000516146 CSF1P09603 554 aa4.18□□□□□ -1.74
RNU6-27P-201ENST00000516146 HSPA1AP0DMV8 641 aaKnown RBP4.18□□□□□ -1.74
RNU6-27P-201ENST00000516146 HSPA1BP0DMV9 641 aaKnown RBP4.18□□□□□ -1.74
RNU6-27P-201ENST00000516146 TMEM225BP0DP42 221 aa4.18□□□□□ -1.74
RNU6-27P-201ENST00000516146 ALOX12P18054 663 aa4.18□□□□□ -1.74
RNU6-27P-201ENST00000516146 DRD1P21728 446 aa4.18□□□□□ -1.74
RNU6-27P-201ENST00000516146 ABCD3P28288 659 aa4.18□□□□□ -1.74
RNU6-27P-201ENST00000516146 HTR7P34969 479 aa4.18□□□□□ -1.74
RNU6-27P-201ENST00000516146 PCP4P48539 62 aa4.18□□□□□ -1.74
RNU6-27P-201ENST00000516146 TIRAPP58753 221 aa4.18□□□□□ -1.74
RNU6-27P-201ENST00000516146 LINC00310P59036 64 aa4.18□□□□□ -1.74
RNU6-27P-201ENST00000516146 RPP30P78346 268 aaKnown RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms