RNA–Protein interactions for RNA: ENST00000504195.1

HMGB3P17-201, Transcript of high mobility group box 3 pseudogene 17, humanhuman

BASIC

Gene HMGB3P17, Length 649 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P17-201ENST00000504195 A0A087WWL8 130 aa2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 PMPCBO75439 489 aa2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 TBXAS1P24557 533 aaPredicted RBP2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 IL6STP40189 918 aaPredicted RBP2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 MTHFSP49914 203 aa2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 RRP1P56182 461 aaKnown RBP2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 EVA1CP58658 441 aa2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 LMAN2Q12907 356 aa2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 KEAP1Q14145 624 aa2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 FGL2Q14314 439 aa2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 KCNB1Q14721 858 aa2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 ZIK1Q3SY52 487 aaPredicted RBP2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 SLC9C1Q4G0N8 1177 aa2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 PLA1AQ53H76 456 aa2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 CC2D1BQ5T0F9 858 aaKnown RBP2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 TMTC4Q5T4D3 741 aa2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 VSTM1Q6UX27 236 aa2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 RANBP10Q6VN20 620 aa2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 ZNF783Q6ZMS7 281 aa2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 DCDC5Q6ZRR9 648 aa2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 PTCHD4Q6ZW05 846 aa2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 CERS3Q8IU89 383 aa2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 SPATA2LQ8IUW3 424 aaPredicted RBP2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 GRAMD1CQ8IYS0 662 aa2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 FBXL14Q8N1E6 418 aa2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 CELF5Q8N6W0 485 aaKnown RBP2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 DBF4BQ8NFT6 615 aa2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 TMEM171Q8WVE6 324 aa2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 NUDCD2Q8WVJ2 157 aa2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 KBTBD7Q8WVZ9 684 aa2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 MED30Q96HR3 178 aa2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 MRGPRX1Q96LB2 322 aa2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 SLITRK1Q96PX8 696 aa2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 NUP88Q99567 741 aaPredicted RBP2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 CGRRF1Q99675 332 aa2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 MS4A7Q9GZW8 240 aaPredicted RBP2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 USP22Q9UPT9 525 aa2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 DRG1Q9Y295 367 aaKnown RBP2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 FER1L4A9Z1Z3 1794 aa2.51□□□□□ -2.01
HMGB3P17-201ENST00000504195 A0A1B0GVY2 172 aa2.5□□□□□ -2.01
HMGB3P17-201ENST00000504195 HMGB1P1B2RPK0 211 aaPredicted RBP2.5□□□□□ -2.01
HMGB3P17-201ENST00000504195 TMPRSS11DO60235 418 aa2.5□□□□□ -2.01
HMGB3P17-201ENST00000504195 OFD1O75665 1012 aa2.5□□□□□ -2.01
HMGB3P17-201ENST00000504195 ALDH2P05091 517 aa2.5□□□□□ -2.01
HMGB3P17-201ENST00000504195 APEHP13798 732 aaKnown RBP2.5□□□□□ -2.01
HMGB3P17-201ENST00000504195 EPHA3P29320 983 aa2.5□□□□□ -2.01
HMGB3P17-201ENST00000504195 ALDH7A1P49419 539 aaKnown RBP2.5□□□□□ -2.01
HMGB3P17-201ENST00000504195 BCAT1P54687 386 aa2.5□□□□□ -2.01
HMGB3P17-201ENST00000504195 RAB1AP62820 205 aa2.5□□□□□ -2.01
HMGB3P17-201ENST00000504195 B4GALNT1Q00973 533 aa2.5□□□□□ -2.01
HMGB3P17-201ENST00000504195 AWAT1Q58HT5 328 aa2.5□□□□□ -2.01
HMGB3P17-201ENST00000504195 ARHGAP30Q7Z6I6 1101 aaPredicted RBP2.5□□□□□ -2.01
HMGB3P17-201ENST00000504195 ZBTB46Q86UZ6 589 aa2.5□□□□□ -2.01
HMGB3P17-201ENST00000504195 MPP5Q8N3R9 675 aa2.5□□□□□ -2.01
HMGB3P17-201ENST00000504195 NGDNQ8NEJ9 315 aaKnown RBP2.5□□□□□ -2.01
HMGB3P17-201ENST00000504195 OR6B3Q8NGW1 331 aa2.5□□□□□ -2.01
HMGB3P17-201ENST00000504195 MAFAQ8NHW3 353 aaPredicted RBP2.5□□□□□ -2.01
HMGB3P17-201ENST00000504195 RAPGEF4Q8WZA2 1011 aa2.5□□□□□ -2.01
HMGB3P17-201ENST00000504195 ANP32BQ92688 251 aaKnown RBP2.5□□□□□ -2.01
HMGB3P17-201ENST00000504195 HPS3Q969F9 1004 aa2.5□□□□□ -2.01
HMGB3P17-201ENST00000504195 SLC25A28Q96A46 364 aa2.5□□□□□ -2.01
HMGB3P17-201ENST00000504195 C1GALT1C1Q96EU7 318 aa2.5□□□□□ -2.01
HMGB3P17-201ENST00000504195 HES6Q96HZ4 224 aa2.5□□□□□ -2.01
HMGB3P17-201ENST00000504195 P2RX7Q99572 595 aaKnown RBP2.5□□□□□ -2.01
HMGB3P17-201ENST00000504195 MGAT4CQ9UBM8 478 aa2.5□□□□□ -2.01
HMGB3P17-201ENST00000504195 WNT16Q9UBV4 365 aa2.5□□□□□ -2.01
HMGB3P17-201ENST00000504195 NOP58Q9Y2X3 529 aaKnown RBP2.5□□□□□ -2.01
HMGB3P17-201ENST00000504195 A0A1W2PPL8 197 aa2.49□□□□□ -2.01
HMGB3P17-201ENST00000504195 BTN3A1O00481 513 aa2.49□□□□□ -2.01
HMGB3P17-201ENST00000504195 CLGNO14967 610 aa2.49□□□□□ -2.01
HMGB3P17-201ENST00000504195 ZNF432O94892 652 aa2.49□□□□□ -2.01
HMGB3P17-201ENST00000504195 PLA2G2AP14555 144 aa2.49□□□□□ -2.01
HMGB3P17-201ENST00000504195 CREB1P16220 341 aa2.49□□□□□ -2.01
HMGB3P17-201ENST00000504195 DIO1P49895 249 aa2.49□□□□□ -2.01
HMGB3P17-201ENST00000504195 ENTPD1P49961 510 aa2.49□□□□□ -2.01
HMGB3P17-201ENST00000504195 SLC13A2Q13183 592 aa2.49□□□□□ -2.01
HMGB3P17-201ENST00000504195 CTBP1Q13363 440 aa2.49□□□□□ -2.01
HMGB3P17-201ENST00000504195 RAB32Q13637 225 aa2.49□□□□□ -2.01
HMGB3P17-201ENST00000504195 SEC23BQ15437 767 aa2.49□□□□□ -2.01
HMGB3P17-201ENST00000504195 INSCQ1MX18 579 aa2.49□□□□□ -2.01
HMGB3P17-201ENST00000504195 PTCHD3Q3KNS1 767 aa2.49□□□□□ -2.01
HMGB3P17-201ENST00000504195 HSP90AB4PQ58FF6 505 aa2.49□□□□□ -2.01
HMGB3P17-201ENST00000504195 ATAT1Q5SQI0 421 aa2.49□□□□□ -2.01
HMGB3P17-201ENST00000504195 LCE1FQ5T754 118 aa2.49□□□□□ -2.01
HMGB3P17-201ENST00000504195 B4GALNT4Q76KP1 1039 aa2.49□□□□□ -2.01
HMGB3P17-201ENST00000504195 LINC01465Q8N7H1 131 aa2.49□□□□□ -2.01
HMGB3P17-201ENST00000504195 PLBD2Q8NHP8 589 aa2.49□□□□□ -2.01
HMGB3P17-201ENST00000504195 DNAJB14Q8TBM8 379 aa2.49□□□□□ -2.01
HMGB3P17-201ENST00000504195 CHMP4CQ96CF2 233 aa2.49□□□□□ -2.01
HMGB3P17-201ENST00000504195 CCDC136Q96JN2 1154 aa2.49□□□□□ -2.01
HMGB3P17-201ENST00000504195 TUBB6Q9BUF5 446 aa2.49□□□□□ -2.01
HMGB3P17-201ENST00000504195 VN1R3Q9BXE9 311 aa2.49□□□□□ -2.01
HMGB3P17-201ENST00000504195 TRIM54Q9BYV2 358 aa2.49□□□□□ -2.01
HMGB3P17-201ENST00000504195 TCF7L1Q9HCS4 588 aa2.49□□□□□ -2.01
HMGB3P17-201ENST00000504195 TRIM36Q9NQ86 728 aa2.49□□□□□ -2.01
HMGB3P17-201ENST00000504195 DECR2Q9NUI1 292 aa2.49□□□□□ -2.01
HMGB3P17-201ENST00000504195 GAR1Q9NY12 217 aaKnown RBP2.49□□□□□ -2.01
HMGB3P17-201ENST00000504195 LPAR3Q9UBY5 353 aa2.49□□□□□ -2.01
HMGB3P17-201ENST00000504195 STAP2Q9UGK3 403 aa2.49□□□□□ -2.01
HMGB3P17-201ENST00000504195 NAP1L2Q9ULW6 460 aaPredicted RBP2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms