RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 GLB1LQ6UWU2 654 aa17.24■□□□□ 0.35
ATG4B-225ENST00000494465 HFE2Q6ZVN8 426 aa17.24■□□□□ 0.35
ATG4B-225ENST00000494465 MAP7D3Q8IWC1 876 aa17.24■□□□□ 0.35
ATG4B-225ENST00000494465 CCDC185Q8N715 623 aa17.24■□□□□ 0.35
ATG4B-225ENST00000494465 PCDH19Q8TAB3 1148 aa17.24■□□□□ 0.35
ATG4B-225ENST00000494465 MYLPFQ96A32 169 aa17.24■□□□□ 0.35
ATG4B-225ENST00000494465 FAM149B1Q96BN6 582 aa17.24■□□□□ 0.35
ATG4B-225ENST00000494465 SLC2A13Q96QE2 648 aa17.24■□□□□ 0.35
ATG4B-225ENST00000494465 CDC42EP4Q9H3Q1 356 aaKnown RBP17.24■□□□□ 0.35
ATG4B-225ENST00000494465 CSNK1G1Q9HCP0 422 aa17.24■□□□□ 0.35
ATG4B-225ENST00000494465 TMLHEQ9NVH6 421 aa17.24■□□□□ 0.35
ATG4B-225ENST00000494465 MTMR10Q9NXD2 777 aa17.24■□□□□ 0.35
ATG4B-225ENST00000494465 DSEQ9UL01 958 aa17.24■□□□□ 0.35
ATG4B-225ENST00000494465 ZNF487B1APH4 448 aa17.23■□□□□ 0.35
ATG4B-225ENST00000494465 DNM1LO00429 736 aa17.23■□□□□ 0.35
ATG4B-225ENST00000494465 FYNP06241 537 aa17.23■□□□□ 0.35
ATG4B-225ENST00000494465 L1CAMP32004 1257 aa17.23■□□□□ 0.35
ATG4B-225ENST00000494465 EIF3BP55884 814 aaKnown RBP17.23■□□□□ 0.35
ATG4B-225ENST00000494465 GPS1Q13098 491 aa17.23■□□□□ 0.35
ATG4B-225ENST00000494465 TFDP2Q14188 446 aa17.23■□□□□ 0.35
ATG4B-225ENST00000494465 NOMO1Q15155 1222 aa17.23■□□□□ 0.35
ATG4B-225ENST00000494465 DENND2CQ68D51 928 aa17.23■□□□□ 0.35
ATG4B-225ENST00000494465 SIX6OS1Q8N1H7 587 aa17.23■□□□□ 0.35
ATG4B-225ENST00000494465 PLD5Q8N7P1 536 aa17.23■□□□□ 0.35
ATG4B-225ENST00000494465 SMARCD1Q96GM5 515 aa17.23■□□□□ 0.35
ATG4B-225ENST00000494465 TMEM209Q96SK2 561 aa17.23■□□□□ 0.35
ATG4B-225ENST00000494465 NPY6RQ99463 290 aa17.23■□□□□ 0.35
ATG4B-225ENST00000494465 ZNF670Q9BS34 389 aa17.23■□□□□ 0.35
ATG4B-225ENST00000494465 MAK16Q9BXY0 300 aaKnown RBP17.23■□□□□ 0.35
ATG4B-225ENST00000494465 ULBP1Q9BZM6 244 aa17.23■□□□□ 0.35
ATG4B-225ENST00000494465 ZNF638Q14966 1978 aaKnown RBP17.23■□□□□ 0.35
ATG4B-225ENST00000494465 PATJQ8NI35 1801 aa17.23■□□□□ 0.35
ATG4B-225ENST00000494465 COL4A4P53420 1690 aaPredicted RBP17.23■□□□□ 0.35
ATG4B-225ENST00000494465 DAOAP59103 153 aa17.23■□□□□ 0.35
ATG4B-225ENST00000494465 EIF3EP60228 445 aaKnown RBP17.23■□□□□ 0.35
ATG4B-225ENST00000494465 SYPL2Q5VXT5 272 aa17.23■□□□□ 0.35
ATG4B-225ENST00000494465 SLC9A4Q6AI14 798 aa17.23■□□□□ 0.35
ATG4B-225ENST00000494465 TRMT10CQ7L0Y3 403 aaKnown RBP17.23■□□□□ 0.35
ATG4B-225ENST00000494465 LRRTM3Q86VH5 581 aa17.23■□□□□ 0.35
ATG4B-225ENST00000494465 METTL23Q86XA0 190 aa17.23■□□□□ 0.35
ATG4B-225ENST00000494465 UNC45BQ8IWX7 931 aa17.23■□□□□ 0.35
ATG4B-225ENST00000494465 HMGB1P1B2RPK0 211 aaPredicted RBP17.22■□□□□ 0.35
ATG4B-225ENST00000494465 NOS2P35228 1153 aa17.22■□□□□ 0.35
ATG4B-225ENST00000494465 DCAF6Q58WW2 860 aa17.22■□□□□ 0.35
ATG4B-225ENST00000494465 NOMO2Q5JPE7 1267 aa17.22■□□□□ 0.35
ATG4B-225ENST00000494465 BHLHA9Q7RTU4 235 aa17.22■□□□□ 0.35
ATG4B-225ENST00000494465 COLGALT2Q8IYK4 626 aa17.22■□□□□ 0.35
ATG4B-225ENST00000494465 FTHL17Q9BXU8 183 aa17.22■□□□□ 0.35
ATG4B-225ENST00000494465 TSPYL1Q9H0U9 437 aa17.22■□□□□ 0.35
ATG4B-225ENST00000494465 PAK6Q9NQU5 681 aaPredicted RBP17.22■□□□□ 0.35
ATG4B-225ENST00000494465 DNAJC17Q9NVM6 304 aaKnown RBP17.22■□□□□ 0.35
ATG4B-225ENST00000494465 YJEFN3A6XGL0 299 aa17.22■□□□□ 0.35
ATG4B-225ENST00000494465 E7ENQ6 273 aa17.22■□□□□ 0.35
ATG4B-225ENST00000494465 FBXO21O94952 628 aa17.22■□□□□ 0.35
ATG4B-225ENST00000494465 IFNB1P01574 187 aa17.22■□□□□ 0.35
ATG4B-225ENST00000494465 RBP3P10745 1247 aa17.22■□□□□ 0.35
ATG4B-225ENST00000494465 SULT1E1P49888 294 aa17.22■□□□□ 0.35
ATG4B-225ENST00000494465 RNASEH2BQ5TBB1 312 aaKnown RBP17.22■□□□□ 0.35
ATG4B-225ENST00000494465 OVOS1Q6IE37 1185 aa17.22■□□□□ 0.35
ATG4B-225ENST00000494465 ZCCHC9Q8N567 271 aaKnown RBP17.22■□□□□ 0.35
ATG4B-225ENST00000494465 POPDC2Q9HBU9 364 aa17.22■□□□□ 0.35
ATG4B-225ENST00000494465 CNGB3Q9NQW8 809 aa17.22■□□□□ 0.35
ATG4B-225ENST00000494465 TBC1D13Q9NVG8 400 aa17.22■□□□□ 0.35
ATG4B-225ENST00000494465 TPX2Q9ULW0 747 aaKnown RBP17.22■□□□□ 0.35
ATG4B-225ENST00000494465 AP4E1Q9UPM8 1137 aa17.22■□□□□ 0.35
ATG4B-225ENST00000494465 GOLGA6L10A6NI86 522 aa17.21■□□□□ 0.35
ATG4B-225ENST00000494465 MCF2LO15068 1137 aa17.21■□□□□ 0.35
ATG4B-225ENST00000494465 TYMPP19971 482 aa17.21■□□□□ 0.35
ATG4B-225ENST00000494465 PPP6R3Q5H9R7 873 aaPredicted RBP17.21■□□□□ 0.35
ATG4B-225ENST00000494465 EMC10Q5UCC4 262 aa17.21■□□□□ 0.35
ATG4B-225ENST00000494465 CTU1Q7Z7A3 348 aaKnown RBP17.21■□□□□ 0.35
ATG4B-225ENST00000494465 FAM131BQ86XD5 332 aa17.21■□□□□ 0.35
ATG4B-225ENST00000494465 RELL1Q8IUW5 271 aa17.21■□□□□ 0.35
ATG4B-225ENST00000494465 P3H4Q92791 437 aa17.21■□□□□ 0.35
ATG4B-225ENST00000494465 KCTD15Q96SI1 283 aaPredicted RBP17.21■□□□□ 0.35
ATG4B-225ENST00000494465 DHX35Q9H5Z1 703 aaKnown RBP17.21■□□□□ 0.35
ATG4B-225ENST00000494465 SCN5AQ14524 2016 aa17.21■□□□□ 0.35
ATG4B-225ENST00000494465 TGM2P21980 687 aa17.21■□□□□ 0.34
ATG4B-225ENST00000494465 LMAN1P49257 510 aa17.21■□□□□ 0.34
ATG4B-225ENST00000494465 IFFO1Q0D2I5 559 aa17.21■□□□□ 0.34
ATG4B-225ENST00000494465 KRT71Q3SY84 523 aa17.21■□□□□ 0.34
ATG4B-225ENST00000494465 PLEKHG4Q58EX7 1191 aa17.21■□□□□ 0.34
ATG4B-225ENST00000494465 C1orf228Q6PIY5 440 aa17.21■□□□□ 0.34
ATG4B-225ENST00000494465 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.21■□□□□ 0.34
ATG4B-225ENST00000494465 SEZ6LQ9BYH1 1024 aa17.21■□□□□ 0.34
ATG4B-225ENST00000494465 FZD10Q9ULW2 581 aa17.21■□□□□ 0.34
ATG4B-225ENST00000494465 PCDHB8Q9UN66 801 aa17.21■□□□□ 0.34
ATG4B-225ENST00000494465 NAALADL1Q9UQQ1 740 aa17.21■□□□□ 0.34
ATG4B-225ENST00000494465 FARP1Q9Y4F1 1045 aaPredicted RBP17.21■□□□□ 0.34
ATG4B-225ENST00000494465 VWA8A3KMH1 1905 aa17.2■□□□□ 0.34
ATG4B-225ENST00000494465 TMEM189-UBE2V1I3L0A0 370 aa17.2■□□□□ 0.34
ATG4B-225ENST00000494465 APOL1O14791 398 aa17.2■□□□□ 0.34
ATG4B-225ENST00000494465 USP17L7P0C7H9 530 aa17.2■□□□□ 0.34
ATG4B-225ENST00000494465 BDNFP23560 247 aa17.2■□□□□ 0.34
ATG4B-225ENST00000494465 CYP2F1P24903 491 aa17.2■□□□□ 0.34
ATG4B-225ENST00000494465 RPL22P35268 128 aaKnown RBP17.2■□□□□ 0.34
ATG4B-225ENST00000494465 MORF4L2Q15014 288 aa17.2■□□□□ 0.34
ATG4B-225ENST00000494465 MTFR1Q15390 333 aa17.2■□□□□ 0.34
ATG4B-225ENST00000494465 AGBL2Q5U5Z8 902 aa17.2■□□□□ 0.34
ATG4B-225ENST00000494465 B4GALNT4Q76KP1 1039 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms