RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 DUS2Q9NX74 493 aaKnown RBP14.65□□□□□ -0.06
CCM2-217ENST00000492883 RASAL2Q9UJF2 1139 aa14.65□□□□□ -0.06
CCM2-217ENST00000492883 MYO6Q9UM54 1294 aa14.65□□□□□ -0.06
CCM2-217ENST00000492883 LRRC53A6NM62 1247 aa14.64□□□□□ -0.07
CCM2-217ENST00000492883 PAPSS1O43252 624 aaPredicted RBP14.64□□□□□ -0.07
CCM2-217ENST00000492883 IRF1P10914 325 aa14.64□□□□□ -0.07
CCM2-217ENST00000492883 PBX1P40424 430 aa14.64□□□□□ -0.07
CCM2-217ENST00000492883 IFNAR2P48551 515 aa14.64□□□□□ -0.07
CCM2-217ENST00000492883 KPNA1P52294 538 aaPredicted RBP14.64□□□□□ -0.07
CCM2-217ENST00000492883 USP4Q13107 963 aa14.64□□□□□ -0.07
CCM2-217ENST00000492883 PDGFRLQ15198 375 aa14.64□□□□□ -0.07
CCM2-217ENST00000492883 FIGNQ5HY92 759 aa14.64□□□□□ -0.07
CCM2-217ENST00000492883 TMEM31Q5JXX7 168 aa14.64□□□□□ -0.07
CCM2-217ENST00000492883 SFMBT2Q5VUG0 894 aa14.64□□□□□ -0.07
CCM2-217ENST00000492883 BHLHA9Q7RTU4 235 aa14.64□□□□□ -0.07
CCM2-217ENST00000492883 ERICH1Q86X53 443 aa14.64□□□□□ -0.07
CCM2-217ENST00000492883 MIB1Q86YT6 1006 aa14.64□□□□□ -0.07
CCM2-217ENST00000492883 ZNF397Q8NF99 534 aaPredicted RBP14.64□□□□□ -0.07
CCM2-217ENST00000492883 TTC8Q8TAM2 541 aa14.64□□□□□ -0.07
CCM2-217ENST00000492883 RIN3Q8TB24 985 aa14.64□□□□□ -0.07
CCM2-217ENST00000492883 OSCP1Q8WVF1 389 aa14.64□□□□□ -0.07
CCM2-217ENST00000492883 CPLX3Q8WVH0 158 aa14.64□□□□□ -0.07
CCM2-217ENST00000492883 BAP1Q92560 729 aa14.64□□□□□ -0.07
CCM2-217ENST00000492883 PBXIP1Q96AQ6 731 aa14.64□□□□□ -0.07
CCM2-217ENST00000492883 CPXM1Q96SM3 734 aa14.64□□□□□ -0.07
CCM2-217ENST00000492883 FAM83CQ9BQN1 747 aa14.64□□□□□ -0.07
CCM2-217ENST00000492883 KLF16Q9BXK1 252 aaPredicted RBP14.64□□□□□ -0.07
CCM2-217ENST00000492883 ARHGEF3Q9NR81 526 aa14.64□□□□□ -0.07
CCM2-217ENST00000492883 HEBP1Q9NRV9 189 aa14.64□□□□□ -0.07
CCM2-217ENST00000492883 OLA1Q9NTK5 396 aaKnown RBP14.64□□□□□ -0.07
CCM2-217ENST00000492883 SEPT11Q9NVA2 429 aaKnown RBP14.64□□□□□ -0.07
CCM2-217ENST00000492883 NOCTQ9UK39 431 aaKnown RBP14.64□□□□□ -0.07
CCM2-217ENST00000492883 STRIP2Q9ULQ0 834 aa14.64□□□□□ -0.07
CCM2-217ENST00000492883 WNT6Q9Y6F9 365 aa14.64□□□□□ -0.07
CCM2-217ENST00000492883 FAM170AA1A519 330 aa14.63□□□□□ -0.07
CCM2-217ENST00000492883 KRBA1A5PL33 1030 aa14.63□□□□□ -0.07
CCM2-217ENST00000492883 SLC9A3R1O14745 358 aaPredicted RBP14.63□□□□□ -0.07
CCM2-217ENST00000492883 CAPN9O14815 690 aa14.63□□□□□ -0.07
CCM2-217ENST00000492883 SCAMP3O14828 347 aaKnown RBP14.63□□□□□ -0.07
CCM2-217ENST00000492883 GPR37L1O60883 481 aa14.63□□□□□ -0.07
CCM2-217ENST00000492883 LSM8O95777 96 aaKnown RBP14.63□□□□□ -0.07
CCM2-217ENST00000492883 LTFP02788 710 aa14.63□□□□□ -0.07
CCM2-217ENST00000492883 CHRNB2P17787 502 aa14.63□□□□□ -0.07
CCM2-217ENST00000492883 CDH5P33151 784 aaPredicted RBP14.63□□□□□ -0.07
CCM2-217ENST00000492883 COG7P83436 770 aa14.63□□□□□ -0.07
CCM2-217ENST00000492883 TNK2Q07912 1038 aa14.63□□□□□ -0.07
CCM2-217ENST00000492883 MLF2Q15773 248 aaPredicted RBP14.63□□□□□ -0.07
CCM2-217ENST00000492883 ASIC2Q16515 512 aa14.63□□□□□ -0.07
CCM2-217ENST00000492883 IER5LQ5T953 404 aa14.63□□□□□ -0.07
CCM2-217ENST00000492883 NAA35Q5VZE5 725 aa14.63□□□□□ -0.07
CCM2-217ENST00000492883 TRIM68Q6AZZ1 485 aa14.63□□□□□ -0.07
CCM2-217ENST00000492883 OR6B2Q6IFH4 312 aa14.63□□□□□ -0.07
CCM2-217ENST00000492883 TRIM72Q6ZMU5 477 aa14.63□□□□□ -0.07
CCM2-217ENST00000492883 HFE2Q6ZVN8 426 aa14.63□□□□□ -0.07
CCM2-217ENST00000492883 MSANTD4Q8NCY6 345 aa14.63□□□□□ -0.07
CCM2-217ENST00000492883 FLCNQ8NFG4 579 aa14.63□□□□□ -0.07
CCM2-217ENST00000492883 CPA5Q8WXQ8 436 aa14.63□□□□□ -0.07
CCM2-217ENST00000492883 IQCDQ96DY2 449 aa14.63□□□□□ -0.07
CCM2-217ENST00000492883 ZFRQ96KR1 1074 aaKnown RBP14.63□□□□□ -0.07
CCM2-217ENST00000492883 RBSNQ9H1K0 784 aa14.63□□□□□ -0.07
CCM2-217ENST00000492883 LINC00597Q9H2U6 94 aa14.63□□□□□ -0.07
CCM2-217ENST00000492883 EBF3Q9H4W6 596 aa14.63□□□□□ -0.07
CCM2-217ENST00000492883 GTSE1Q9NYZ3 720 aa14.63□□□□□ -0.07
CCM2-217ENST00000492883 MARCH2Q9P0N8 246 aa14.63□□□□□ -0.07
CCM2-217ENST00000492883 LSM7Q9UK45 103 aaKnown RBP14.63□□□□□ -0.07
CCM2-217ENST00000492883 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.63□□□□□ -0.07
CCM2-217ENST00000492883 DOCK6Q96HP0 2047 aa14.63□□□□□ -0.07
CCM2-217ENST00000492883 SLC12A8A0AV02 714 aa14.62□□□□□ -0.07
CCM2-217ENST00000492883 E2F8A0AVK6 867 aa14.62□□□□□ -0.07
CCM2-217ENST00000492883 ARNTLO00327 626 aa14.62□□□□□ -0.07
CCM2-217ENST00000492883 ERBB2P04626 1255 aa14.62□□□□□ -0.07
CCM2-217ENST00000492883 HMBSP08397 361 aa14.62□□□□□ -0.07
CCM2-217ENST00000492883 NCAM1P13591 858 aa14.62□□□□□ -0.07
CCM2-217ENST00000492883 ARSAP15289 507 aa14.62□□□□□ -0.07
CCM2-217ENST00000492883 FMO1Q01740 532 aa14.62□□□□□ -0.07
CCM2-217ENST00000492883 PRKCQQ04759 706 aa14.62□□□□□ -0.07
CCM2-217ENST00000492883 RUNX3Q13761 415 aa14.62□□□□□ -0.07
CCM2-217ENST00000492883 ITPRIPL2Q3MIP1 535 aa14.62□□□□□ -0.07
CCM2-217ENST00000492883 PTPN20Q4JDL3 420 aa14.62□□□□□ -0.07
CCM2-217ENST00000492883 EFHC1Q5JVL4 640 aa14.62□□□□□ -0.07
CCM2-217ENST00000492883 TPRG1Q6ZUI0 275 aa14.62□□□□□ -0.07
CCM2-217ENST00000492883 IRF2BP2Q7Z5L9 587 aa14.62□□□□□ -0.07
CCM2-217ENST00000492883 KIAA1958Q8N8K9 716 aa14.62□□□□□ -0.07
CCM2-217ENST00000492883 C18orf8Q96DM3 657 aa14.62□□□□□ -0.07
CCM2-217ENST00000492883 AGPAT1Q99943 283 aa14.62□□□□□ -0.07
CCM2-217ENST00000492883 TRIM62Q9BVG3 475 aa14.62□□□□□ -0.07
CCM2-217ENST00000492883 TTYH3Q9C0H2 523 aa14.62□□□□□ -0.07
CCM2-217ENST00000492883 NUCKS1Q9H1E3 243 aaKnown RBP14.62□□□□□ -0.07
CCM2-217ENST00000492883 C8orf33Q9H7E9 229 aaPredicted RBP14.62□□□□□ -0.07
CCM2-217ENST00000492883 C11orf16Q9NQ32 467 aa14.62□□□□□ -0.07
CCM2-217ENST00000492883 TBC1D14Q9P2M4 693 aa14.62□□□□□ -0.07
CCM2-217ENST00000492883 TJP2Q9UDY2 1190 aa14.62□□□□□ -0.07
CCM2-217ENST00000492883 SFMBT1Q9UHJ3 866 aa14.62□□□□□ -0.07
CCM2-217ENST00000492883 PIAS3Q9Y6X2 628 aa14.62□□□□□ -0.07
CCM2-217ENST00000492883 A0A1W2PQJ5 194 aa14.61□□□□□ -0.07
CCM2-217ENST00000492883 PRR33A8MZF0 331 aa14.61□□□□□ -0.07
CCM2-217ENST00000492883 PDGFBP01127 241 aaPredicted RBP14.61□□□□□ -0.07
CCM2-217ENST00000492883 CYP1A1P04798 512 aaPredicted RBP14.61□□□□□ -0.07
CCM2-217ENST00000492883 TNFAIP3P21580 790 aa14.61□□□□□ -0.07
CCM2-217ENST00000492883 STARD6P59095 220 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms